Gvermi8809.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8809.t1
Unique Name	Gvermi8809.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	367

Homology

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BLAST of Gvermi8809.t1 vs. uniprot
Match: A0A2V3IM92_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM92_9FLOR)

HSP 1 Score: 326 bits (836), Expect = 1.190e-106
Identity = 189/359 (52.65%), Postives = 247/359 (68.80%), Query Frame = 0

Query:    5 TPDTSSSLSSHPHRAPNVDDANKQLFFPHHNVANAFDASDVLYRHAVLNAKASAITAKRATQAADALRDRENALRLTLLNLKRHHMRRVLLPRSTHAKLLSAEAQLTSVARQSAQADRAATHAQTKALADMDTCMRLRQDARQPRHSPRTRRQILDGLFDALHLASPRQNELESQRDALVLAANRKKDALTAQRQAVQQLASALLHVKQARSELWDARITNTVHMFNGGALRSSSAMHSRIRFNNAAEKARDAAAKIAHVVAVNPLLPVRKMIKARSRDRASSGDTDIFFDGFVTDMLARMAIDKAEDALESLEEECEASIVMQKKTVAQLREEYAATSAELERVSKALVRVRVDLMHD 363
            +PDT+SSLSS P   P+ +   + L+  H +V NA   SD LY+ AV  AK SA  AK AT  AD +R  E +L   L  L++ H+R++LL R    KL S ++QL S ++  A ADR A HAQ +AL DM+TC RLR DA++   S R RRQ+LD +FD L   S ++N +E +RDALVL  NRKKD+LTAQRQA Q L SAL+ V  AR +LWDARITNTV +FNGGA+   + M S+IRF  A  K + A +K+   V +NP LP+RK + ARS+D+ S G TDIFFDG  TD++AR+AIDKAE  +ES+EE    SI MQKK VAQLRE+Y+++S+ELER SK LVR+R +L+H+
Sbjct:    8 SPDTASSLSSQP-TTPHGEKTGRNLYLHHESVVNALQGSDTLYQDAVARAKKSAKNAKHATDTADRIRATEESLSDYLDQLEKQHVRKMLLRRKMRQKLSSVQSQLDSASQNCADADREAVHAQRQALQDMETCKRLRGDAKKLHKSERMRRQLLDKMFDGLQAGSLQENLVEEERDALVLVTNRKKDSLTAQRQAYQLLTSALVEVGNARKDLWDARITNTVDLFNGGAIGMMAGMQSQIRFKAARTKVQCALSKLEQAVVLNPKLPLRKTLNARSKDKMSLGMTDIFFDGVTTDLMARLAIDKAEAVVESVEESLVKSIAMQKKHVAQLREDYSSSSSELERTSKELVRIRAELIHE 365

The following BLAST results are available for this feature:

BLAST of Gvermi8809.t1 vs. uniprot

BLAST of Gvermi8809.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IM92_9FLOR	1.190e-106	52.65	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 300..327
None	No IPR available	COILS	Coil	Coil	coord: 332..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_2241	contig	ScGOVlb_2241:98194..99294 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8809.t1	Gvermi8809.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_2241 98194..99294 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8809.t1 ID=Gvermi8809.t1|Name=Gvermi8809.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=367bp
MSSCTPDTSSSLSSHPHRAPNVDDANKQLFFPHHNVANAFDASDVLYRHA
VLNAKASAITAKRATQAADALRDRENALRLTLLNLKRHHMRRVLLPRSTH
AKLLSAEAQLTSVARQSAQADRAATHAQTKALADMDTCMRLRQDARQPRH
SPRTRRQILDGLFDALHLASPRQNELESQRDALVLAANRKKDALTAQRQA
VQQLASALLHVKQARSELWDARITNTVHMFNGGALRSSSAMHSRIRFNNA
AEKARDAAAKIAHVVAVNPLLPVRKMIKARSRDRASSGDTDIFFDGFVTD
MLARMAIDKAEDALESLEEECEASIVMQKKTVAQLREEYAATSAELERVS
KALVRVRVDLMHDVLG*