Gvermi8808.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8808.t2
Unique NameGvermi8808.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length529
Homology
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A2V3IM88_9FLOR (H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM88_9FLOR)

HSP 1 Score: 741 bits (1912), Expect = 2.970e-265
Identity = 371/445 (83.37%), Postives = 403/445 (90.56%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQPPNQNVS--VALPENGEAKA---GINGAAKKETAVDEAPSMEVEDAITPENK 485
            +++  +  KPELDTS WPLLLK+YD LNVRSSHFTPIPVGHSPL RPILEY+RYGVINLDKPSNPSSHEVVAWIK+ILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+GVLKLHG+LGENPVSK+RRAVEMLTGALFQRPPLISAVKRQLRIRT+YEAKLLEYDE KRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWV+DNQRDESYLRSVIQPLEALLVN+KRIVVKDTAVNAICYGAVLMIPGVLRF+DDI+V QE+ LITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRV+MERDTYPRAWGLGP AGKKKGLIREGKLDK+G  NE TPADW+  YK L +P   QP ++  S  VA P NG   A    ++ + +   + +E PSMEVEDA+TP+++
Sbjct:   16 YVVKPESSKPELDTSKWPLLLKNYDTLNVRSSHFTPIPVGHSPLSRPILEYLRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVGVLKLHGELGENPVSKVRRAVEMLTGALFQRPPLISAVKRQLRIRTVYEAKLLEYDEAKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVYDNQRDESYLRSVIQPLEALLVNFKRIVVKDTAVNAICYGAVLMIPGVLRFEDDIDVGQEVALITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVVMERDTYPRAWGLGPTAGKKKGLIREGKLDKYGNHNEKTPADWKNSYKSLNVPPPAQPSSEERSADVAAPANGSTPALPPKVHKSEESPFSAEEVPSMEVEDAVTPDDR 460          
BLAST of Gvermi8808.t2 vs. uniprot
Match: R7Q3X0_CHOCR (Box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3X0_CHOCR)

HSP 1 Score: 634 bits (1636), Expect = 1.440e-223
Identity = 306/443 (69.07%), Postives = 370/443 (83.52%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQPPNQNVSVALPENGEAKAGINGAAKKETAVDEAPSMEVEDAITPENKSDK 488
            +I+  + K P LDTS WPLLLK+YD LNVR++HFTPIPVG SP KRP+ +Y+RYGVINLDKP+NPSSHEVVAWIK+IL+VDKTGHSGTLDPKVTG LIVCIDR+TRLVKSQQGAGKEY+ V+KLHG LGENPV+++RR V++LTGALFQRPPLISAVKRQLRIRT+Y++KLLE+D+K+ L VFWVKCEAGTYIRTLCVHLGYLLGVGG+M ELRR+RSG+MGE+  M TMHDVLDA WV++N RDESYLR+VI+PLE+LL  +KR+V KD+AVN+ICYGAVLMIPG+LRF+D IEV +EIV++TTKGEA+A+A+AEMNTAV+ATCDHGR+ARIKRV+MERDTYPR WGLGP+A KKKGL+++GKLDKHG+PNE TP +W +   DL +          V    P N      +  +  K  A +  P  +VE+A TP+    K
Sbjct:   10 YIIKPESKTPALDTSKWPLLLKNYDALNVRTAHFTPIPVGCSPHKRPLHDYVRYGVINLDKPANPSSHEVVAWIKRILKVDKTGHSGTLDPKVTGCLIVCIDRSTRLVKSQQGAGKEYVAVVKLHGSLGENPVTQMRRGVDLLTGALFQRPPLISAVKRQLRIRTVYQSKLLEFDDKRNLGVFWVKCEAGTYIRTLCVHLGYLLGVGGNMQELRRIRSGVMGEDTGMYTMHDVLDAQWVYENNRDESYLRTVIKPLESLLTGHKRVVAKDSAVNSICYGAVLMIPGLLRFEDGIEVGEEIVIMTTKGEAVALAVAEMNTAVMATCDHGRIARIKRVVMERDTYPRKWGLGPMASKKKGLVQQGKLDKHGRPNESTPKEWGQMQPDLSVAAAVAAVTSPVKADAPSND----AMEVSTPKTDAGEATPGDKVENATTPDTSEKK 448          
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A7S0ZE13_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE13_9RHOD)

HSP 1 Score: 610 bits (1573), Expect = 5.730e-214
Identity = 284/386 (73.58%), Postives = 341/386 (88.34%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDL 431
            F++   H  P L T++WPLLLK+YD+LNVRSSH+TPIP G+SPLKRP++EY+RYG+INLDKP+NPSSHEVVAWIK+ILR +KTGHSGTLDPKVTG LIVCIDRATRLVKSQQ AGKEY+GV +LH  LGEN + K+ RA+EMLTGA+FQRPPLISAVKRQLR+RTIYE+KL+EYD+++RL VFWV CEAGTYIRTLCVHLG LLGVGG M ELRRVRSG  GE E MVTMHDVLDA W +DN +DE+YLR V++PLEALLV + R+++KD++VNA+CYGA LMIPG+LRF+DDIEV QE+V++TTKGEA+A+AIAEM +A++ATCDHG VARIKRVIMERDTYPR WGLGP+A KKK ++++GKLDKHGK N+ TPA W K++  L
Sbjct:   23 FLIEPSHAGPSLSTADWPLLLKNYDRLNVRSSHYTPIPCGNSPLKRPLIEYLRYGMINLDKPANPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGVFRLHASLGENALPKIERALEMLTGAVFQRPPLISAVKRQLRVRTIYESKLIEYDDERRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAQGEGEGMVTMHDVLDAQWTYDNTKDETYLRRVVKPLEALLVKHSRLIIKDSSVNAVCYGAKLMIPGLLRFEDDIEVGQEVVIVTTKGEAVALAIAEMTSAIMATCDHGVVARIKRVIMERDTYPRRWGLGPMASKKKQMVKDGKLDKHGKSNDQTPASWTKEHPSL 408          
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A7S1TLW0_9RHOD (Hypothetical protein n=2 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLW0_9RHOD)

HSP 1 Score: 600 bits (1546), Expect = 3.160e-210
Identity = 284/394 (72.08%), Postives = 342/394 (86.80%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQP 439
            F +  +   P LDTS WPLLLK++DKLNVRS+H+TPIP GHSPLKRP+ EY+RYG+INLDKP+NPSSHEVVAW+KKILR +KTGHSGTLDP+VTG LIVCIDRATRLVKSQQ AGKEY+GVL+LH  LG+N  ++++RAVE LTGA+FQRPPLISAVKRQLRIRTIYE++L+EYD+ +RL VFWV CEAGTYIRTLCVHLG LLGVGG M ELRRVRSG   E E +V+MHDVLDA W++DN +DESYLR V++PLEALLV + R+V+KD++VNAICYGA LMIPG+LR++DDIEV QEIV+++TKGEA+A+AIAEM +AV+ATCDHG VARIKRVIMERDTYPR WGLGP+A KKK ++++GKL KHG+ NE+TPA W K++  L  P  + P
Sbjct:   14 FQIKPESAAPALDTSEWPLLLKNFDKLNVRSAHYTPIPSGHSPLKRPLQEYLRYGMINLDKPANPSSHEVVAWVKKILRCEKTGHSGTLDPQVTGCLIVCIDRATRLVKSQQSAGKEYVGVLRLHASLGDNAEARVKRAVETLTGAVFQRPPLISAVKRQLRIRTIYESRLIEYDDARRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAQSEREGLVSMHDVLDAQWLYDNNKDESYLRRVVKPLEALLVKHPRVVIKDSSVNAICYGAKLMIPGLLRYEDDIEVGQEIVIVSTKGEAVALAIAEMTSAVMATCDHGVVARIKRVIMERDTYPRRWGLGPMASKKKQMVKDGKLTKHGRTNENTPASWSKEHPKLSPPLEQAP 407          
BLAST of Gvermi8808.t2 vs. uniprot
Match: UPI00125D9BD6 (H/ACA ribonucleoprotein complex subunit 4-like n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D9BD6)

HSP 1 Score: 597 bits (1540), Expect = 1.330e-207
Identity = 287/389 (73.78%), Postives = 340/389 (87.40%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLP 434
            +++  Q   P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYGV+NLDKPSNPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH D+ +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  + L VFW+ CEAGTY+RT+CVHLG LLGVGG M ELRRVRSGI GE++NMVTMHDV+DA WV+DN RDESYLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI +GKLDKHGKPNE TPA+W    ++++LP
Sbjct:   38 YLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVLNLDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTMCVHLGLLLGVGGHMQELRRVRSGISGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPAEW---LRNVVLP 421          
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A5B6ZX74_DAVIN (Putative H/ACA ribonucleoprotein complex subunit 4 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZX74_DAVIN)

HSP 1 Score: 593 bits (1529), Expect = 3.150e-207
Identity = 288/397 (72.54%), Postives = 345/397 (86.90%), Query Frame = 0
Query:   38 LQSLSNLYFILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLP 434
            +Q+ ++ Y I P Q   P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYGVINLDKP+NPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ + +LH  + +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLE+D  K LAVFW+ CEAGTY+RTLCVHLG +LGVG  M ELRRVRSGI+GE++NMVTMHDV+DA WV+DN RDESYLR VI PLE +L +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +EIVL+TTKGEA+A+ IAEM TAV+ATCDHG VARIKRV+M+RDTYPR WGLGP A  KK LI EGKL KHGKPNE+TP++W    ++++LP
Sbjct:   28 VQTQTDDYLIKP-QSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSSVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEFDPDKHLAVFWISCEAGTYVRTLCVHLGLILGVGAHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAVALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYPRKWGLGPRASMKKKLIGEGKLSKHGKPNENTPSEW---LRNVVLP 418          
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A5J4Z627_PORPP (Centromere/microtubule-binding protein CBF5 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z627_PORPP)

HSP 1 Score: 591 bits (1523), Expect = 5.940e-207
Identity = 277/381 (72.70%), Postives = 335/381 (87.93%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQK 426
            F + ++   P LDTS+WPLLLK+YDKLN+RS+H+TPIP GHSPL+RPI EY+RYG+INLDKP+NPSSHEVVAWIKKILR +KTGHSGTLDPKVTG LIVC+DRATRLVKSQQ AGKEY+ V +LH  LGE+ + K++RAV+MLTGA+FQRPPLISAVKRQLRIRTIYE+KL+EY+++K+L VFWV CEAGTYIRTLCVHLG LLGVGG M ELRRVRSG  GE E MVTMHDV+DA WV+D+ ++E YLR V++PLEALLV +KR+ +KD+ +NAICYGA LMIPG+LR++DDIEV +EIV+++TKGEA+A+ IAEM +A++ATCDHG VARIKRVIMERDTYPR WGLGP A KKK +I++G+LDKHG+ NE TP  W+K
Sbjct:   12 FAIKSESVTPALDTSHWPLLLKNYDKLNIRSAHYTPIPNGHSPLRRPIEEYLRYGMINLDKPANPSSHEVVAWIKKILRCEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQSAGKEYVAVFRLHESLGEDALPKIQRAVDMLTGAVFQRPPLISAVKRQLRIRTIYESKLIEYNDEKKLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAQGETEGMVTMHDVMDAQWVYDHTKNEEYLRRVVKPLEALLVKHKRVFIKDSTINAICYGAKLMIPGLLRYEDDIEVGEEIVIVSTKGEAVALGIAEMTSAIMATCDHGVVARIKRVIMERDTYPRRWGLGPTASKKKQMIKDGQLDKHGRKNEKTPDSWKK 392          
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A2J6K8G3_LACSA (Uncharacterized protein n=3 Tax=Asteraceae TaxID=4210 RepID=A0A2J6K8G3_LACSA)

HSP 1 Score: 591 bits (1523), Expect = 6.610e-207
Identity = 284/389 (73.01%), Postives = 337/389 (86.63%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLP 434
            +++  Q   P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYGVINLDKP+NPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH D+ +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  K L VFW+ CEAGTY+RTLCVHLG +LGVGG M ELRRVRSGIMGE++NM+TMHDV+DA W +DN RDE+YLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIE  +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI EGKL KHGK NE TPA+W    ++++LP
Sbjct:   37 YLIKPQSFTPSIDTSEWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGIMGEKDNMITMHDVMDAQWSYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPTASMKKKLITEGKLSKHGKANEKTPAEW---LRNVVLP 420          
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A6J1CVU2_MOMCH (H/ACA ribonucleoprotein complex subunit 4 n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1CVU2_MOMCH)

HSP 1 Score: 595 bits (1535), Expect = 8.450e-207
Identity = 285/389 (73.26%), Postives = 341/389 (87.66%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLP 434
            F++  Q   P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYG++NLDKP+NPSSHEVVAWIK+ILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ + +LH  + +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD +K L VFW+ CEAGTY+RTLCVHLG +LGVGG M ELRRVRSGI+GE++NMVTMHDV+DA WV+DN +DESYLR VI PLE +L +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI EGKLDKHGKPNE+TP +W    ++L+LP
Sbjct:   40 FMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSSVPD--VAKVSRALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGIVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEW---LRNLVLP 423          
BLAST of Gvermi8808.t2 vs. uniprot
Match: A0A835VI09_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835VI09_VANPL)

HSP 1 Score: 595 bits (1533), Expect = 9.110e-207
Identity = 284/379 (74.93%), Postives = 332/379 (87.60%), Query Frame = 0
Query:   46 FILPAQHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADW 424
            +++  Q   P LDTSNWP+LLK+YD+LNVR+ H+TP+P GHSPLKRP+  Y+RYG++NLDKPSNPSSHEVVAWIK+ILR DKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH  + +   +K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD +K L +FW+ CEAGTY+RTLCVHLG LLGVGG M ELRRVRSGI+GE++NMVTMHDVLDA WV+DN +DESYLR V+ PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VARIKRV+M+RDTYPR WGLGP A  KK +I EG LDKHGKPNE TPA+W
Sbjct:   55 YLIKPQSFTPSLDTSNWPILLKNYDRLNVRTGHYTPLPTGHSPLKRPLDIYLRYGILNLDKPSNPSSHEVVAWIKRILRCDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDT--AKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDAEKHLVIFWISCEAGTYVRTLCVHLGLLLGVGGHMQELRRVRSGILGEKDNMVTMHDVLDAQWVYDNFKDESYLRRVVMPLEVLLKSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGTVARIKRVVMDRDTYPRKWGLGPRASMKKKMIAEGLLDKHGKPNEKTPAEW 431          
The following BLAST results are available for this feature:
BLAST of Gvermi8808.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM88_9FLOR2.970e-26583.37H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=... [more]
R7Q3X0_CHOCR1.440e-22369.07Box H/ACA snoRNP rRNA pseudouridine syntase compon... [more]
A0A7S0ZE13_9RHOD5.730e-21473.58Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TLW0_9RHOD3.160e-21072.08Hypothetical protein n=2 Tax=Erythrolobus australi... [more]
UPI00125D9BD61.330e-20773.78H/ACA ribonucleoprotein complex subunit 4-like n=1... [more]
A0A5B6ZX74_DAVIN3.150e-20772.54Putative H/ACA ribonucleoprotein complex subunit 4... [more]
A0A5J4Z627_PORPP5.940e-20772.70Centromere/microtubule-binding protein CBF5 n=1 Ta... [more]
A0A2J6K8G3_LACSA6.610e-20773.01Uncharacterized protein n=3 Tax=Asteraceae TaxID=4... [more]
A0A6J1CVU2_MOMCH8.450e-20773.26H/ACA ribonucleoprotein complex subunit 4 n=4 Tax=... [more]
A0A835VI09_VANPL9.110e-20774.93Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012960Dyskerin-likeSMARTSM01136DKCLD_2coord: 58..116
e-value: 7.2E-33
score: 125.2
IPR012960Dyskerin-likePFAMPF08068DKCLDcoord: 59..116
e-value: 2.7E-31
score: 107.4
IPR002478PUA domainSMARTSM00359pua_5coord: 309..383
e-value: 2.4E-18
score: 77.0
IPR002478PUA domainPFAMPF01472PUAcoord: 309..382
e-value: 3.7E-18
score: 65.2
IPR002501Pseudouridine synthase II, N-terminalPFAMPF01509TruB_Ncoord: 120..238
e-value: 1.4E-19
score: 70.9
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 92..300
e-value: 1.2E-174
score: 581.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..426
NoneNo IPR availablePANTHERPTHR23127:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1coord: 45..524
NoneNo IPR availablePROSITEPS50890PUAcoord: 308..383
score: 17.223557
NoneNo IPR availableCDDcd02572PseudoU_synth_hDyskerincoord: 98..282
e-value: 7.5509E-132
score: 378.913
IPR036974PUA domain superfamilyGENE3D2.30.130.10PUA domaincoord: 59..392
e-value: 1.2E-174
score: 581.9
IPR004521Uncharacterised domain CHP00451TIGRFAMTIGR00451TIGR00451coord: 300..378
e-value: 5.3E-9
score: 34.3
IPR004802tRNA pseudouridine synthase B familyTIGRFAMTIGR00425TIGR00425coord: 66..393
e-value: 2.6E-154
score: 511.1
IPR004802tRNA pseudouridine synthase B familyPANTHERPTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5coord: 45..524
IPR032819tRNA pseudouridylate synthase B, C-terminalPFAMPF16198TruB_C_2coord: 239..305
e-value: 6.4E-21
score: 74.3
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 59..306
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 308..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:95445..97031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8808.t2Gvermi8808.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 95445..97031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8808.t2 ID=Gvermi8808.t2|Name=Gvermi8808.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=529bp
MTNNTTSLFSNRSHLYVYQTPMHKLRFVLSSVIPYAWLQSLSNLYFILPA
QHKKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYG
VINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRAT
RLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLIS
AVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLG
VGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQP
LEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITT
KGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGK
KKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQPPNQNVSVALPE
NGEAKAGINGAAKKETAVDEAPSMEVEDAITPENKSDKKKKDKSSKKKRK
REDAADAPESEKKKKKKKKKKKESTVDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012960Dyskerin-like
IPR002478PUA
IPR002501PsdUridine_synth_N
IPR036974PUA_sf
IPR004521Uncharacterised_CHP00451
IPR004802tRNA_PsdUridine_synth_B_fam
IPR032819TruB_C
IPR020103PsdUridine_synth_cat_dom_sf
IPR015947PUA-like_sf