Gvermi8806.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8806.t1
Unique NameGvermi8806.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length259
Homology
BLAST of Gvermi8806.t1 vs. uniprot
Match: A0A2V3IPY3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPY3_9FLOR)

HSP 1 Score: 367 bits (941), Expect = 1.490e-125
Identity = 180/252 (71.43%), Postives = 203/252 (80.56%), Query Frame = 0
Query:    1 MTIRPSRRSFLHTAPL-LLPLLLADTPAIQAELSALASKFPGAGMPDIYYPPFTLGEWLVTRELYAVQVQPDAVEIPGHSLLSHLAIDAQRETIGQRNTFPARFISHRDHVIEDRAFNTRAELAPDSVSWHPDNPNLLTVAWGRSPGSTRIRECKVTKRSFVDAPQGYGTFVSSEYARVVDVPSQSAFISFSKRPSVYGRRRLVRYRVSSVTDKMMPDGMDRIVIDYIYPPSPADAKYAMLLKYRDFLIRRT 251
            M IRPSRR  L + P  ++PLLLAD+  IQAELSALAS  PGAGMPD+YYPPF  G+WLVTRELYAV++   AVEI  HS+LS  AIDA R  IG R TFP RF+SHRDH+I DR FNTRAEL  D V W  DNPN+++V WGR+P   RIRECK+TKRSFVDAPQGYGTFVSSEYARVVDVPS+ A +S SK PSVYGRRRLVRY+VSSV+D M PD +DRIV+DYIYPPSP  AKY+MLLKYRDFL R T
Sbjct:   25 MRIRPSRRDVLRSVPAAVIPLLLADSGDIQAELSALASHIPGAGMPDVYYPPFFQGDWLVTRELYAVEMSDGAVEIAAHSMLSGRAIDALRNRIGLRETFPVRFVSHRDHIIADRLFNTRAELGADQVLWDADNPNIISVTWGRAPAKKRIRECKLTKRSFVDAPQGYGTFVSSEYARVVDVPSEDALMSVSKAPSVYGRRRLVRYKVSSVSDSMQPDALDRIVVDYIYPPSPPGAKYSMLLKYRDFLNRPT 276          
BLAST of Gvermi8806.t1 vs. uniprot
Match: L1JJI9_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JJI9_GUITC)

HSP 1 Score: 84.0 bits (206), Expect = 1.540e-15
Identity = 67/220 (30.45%), Postives = 102/220 (46.36%), Query Frame = 0
Query:   36 ASKFPGAGMPDIYYPPFTLGEWLVTRELYAVQVQPDAVEIPGHSLLSHLAIDAQRETIGQRNTFPARFISHRDHVIEDRAFNTRAELAPDS-----VSWHPDNPNLLTVAWGRSPGSTRIRECKVTKRSFVDAPQGYGTFVSSEYARVVDVPSQSAFISFSKRPSVYGRRRLVRYRVSSVTDKMMPDGMDRIVIDYIYPPSPADAKYA-MLLKYRDFLIR 249
            ASK PG G  D++YP    G+W V R +  V++      I    L   +   ++++ + Q  T   R+I   D  I DR +NTR  LA +      V W   NPN+LTV++       RI E KVTKRS      G  T   +E+ R+  + +  +    +  P +  R    R+RV         D ++ I+++Y+ P +  D K A M +KY   L R
Sbjct:   65 ASKIPGFGPKDVFYPDSFRGKWNVERTITGVEL---LAAIEDQDLYKKVL--SRKDKVEQYTT---RYIPKEDGTIADREYNTRQLLAAEDEKGMDVQWSASNPNVLTVSYPDG----RIEERKVTKRSSSMGGDG-STAEFTEFVRIAQLQNAGSLTGVAPAPRISARWYRCRFRVVDA------DTVESILLEYVLPDARPDPKDAWMKVKYISRLKR 265          
BLAST of Gvermi8806.t1 vs. uniprot
Match: B8C094_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C094_THAPS)

HSP 1 Score: 70.5 bits (171), Expect = 1.260e-10
Identity = 66/209 (31.58%), Postives = 95/209 (45.45%), Query Frame = 0
Query:   23 ADTPAIQAELSALASK-FPGAGMPDIYYPPFTLGEWLVTR-------ELYAVQVQPDAVEIPGHSLLSHLAIDAQRETIGQRNTFPARFISHRDHVIEDRAFNTRA---ELAP--------------DSVSWHPDNPNLLTVAWGRSPGSTRIRECKVTKRSFVDAPQGYGTFVSSEYARVVDVPSQSAFISFSKRPSVYGRRRLVRYR 206
            A+TPA    +  L+SK  PG G PD+YYPP+ +G+W VTR         Y     P  VE     +      D +  +    N  PA         I DRAFN R+    LA               + + W P NPN+L++++  + GS++  E KVTKRS   +  G   F SSE+ R+  VP+          PS+Y  R L +++
Sbjct:   11 AETPAEAIRI--LSSKTLPGLGPPDVYYPPYFVGKWKVTRLVTTSEDSFYKDVPLPLKVESEMRFVPYDAGKDFENFSGDNANDSPA---------IADRAFNERSFYNALASVLFSGPVPKSLPSINKLDWTPTNPNVLSMSY--ADGSSK--EVKVTKRSSDVSKSGDSVF-SSEFRRITAVPAAGGVAGGI--PSIYKSRVLTKWK 201          
BLAST of Gvermi8806.t1 vs. uniprot
Match: A0A1X6P3B1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3B1_PORUM)

HSP 1 Score: 70.5 bits (171), Expect = 2.910e-10
Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 0
Query:  118 TRAELAP----DSVS--WHPDNPNLLTVAWGRSPGSTRIRECKVTKRSFVDAPQGYGTFVSSEYARV 178
            TR   AP    DSVS  W PDNPN+LTV  G   GSTR  E K+TKRS+VD P GYGTFVSSEYAR+
Sbjct:  268 TRRVRAPGSGRDSVSTTWSPDNPNVLTVTAG---GSTR--EEKITKRSYVDEPGGYGTFVSSEYARI 329          
The following BLAST results are available for this feature:
BLAST of Gvermi8806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IPY3_9FLOR1.490e-12571.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
L1JJI9_GUITC1.540e-1530.45Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
B8C094_THAPS1.260e-1031.58Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1X6P3B1_PORUM2.910e-1064.18Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:91013..91789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8806.t1Gvermi8806.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 91013..91789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8806.t1 ID=Gvermi8806.t1|Name=Gvermi8806.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=259bp
MTIRPSRRSFLHTAPLLLPLLLADTPAIQAELSALASKFPGAGMPDIYYP
PFTLGEWLVTRELYAVQVQPDAVEIPGHSLLSHLAIDAQRETIGQRNTFP
ARFISHRDHVIEDRAFNTRAELAPDSVSWHPDNPNLLTVAWGRSPGSTRI
RECKVTKRSFVDAPQGYGTFVSSEYARVVDVPSQSAFISFSKRPSVYGRR
RLVRYRVSSVTDKMMPDGMDRIVIDYIYPPSPADAKYAMLLKYRDFLIRR
TTASRLLH*
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