Gvermi879.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi879.t1
Unique NameGvermi879.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length233
Homology
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A2V3INQ4_9FLOR (Mitotic spindle assembly checkpoint protein MAD2A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ4_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 4.290e-87
Identity = 142/224 (63.39%), Postives = 170/224 (75.89%), Query Frame = 0
Query:    9 DHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDVCVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSYSVSDN 232
            DHSI++SGSADLVADFFSY VNTLL+LRGVYPP+TF  AQKYGVTVY+STD  VQ +LQ+VLTQMRTWLH S+LRR+VV+IASAAT+ VLERWAFDV +S+                                   S K+   IM+EIQAIIRQISA+V FLP+LDEACSFD+LIYTDK+ +TP KW E+GPRTIPNA+ VTLRSFSTS+H+V ASVS+S++D+
Sbjct:   21 DHSITISGSADLVADFFSYAVNTLLFLRGVYPPDTFKHAQKYGVTVYLSTDQKVQAYLQTVLTQMRTWLHNSALRRLVVIIASAATRNVLERWAFDVNLSE-----------------------HHQTTPTASNPTSQKDPQRIMSEIQAIIRQISATVTFLPLLDEACSFDILIYTDKAVQTPTKWHESGPRTIPNAEQVTLRSFSTSLHNVDASVSFSITDD 221          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A7M4EA82_CROPO (Mitotic arrest deficient 2 like 1 n=2 Tax=Longirostres TaxID=1298654 RepID=A0A7M4EA82_CROPO)

HSP 1 Score: 191 bits (484), Expect = 9.520e-58
Identity = 103/228 (45.18%), Postives = 151/228 (66.23%), Query Frame = 0
Query:    1 MAPQQAASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSY 227
            MA QQ+  +  I+L GSAD+VA+FFSYG+N++LY RG+YPPETF+ AQ+YG+T+ V+ DP +QR+L SV+ Q++ WL+  S++R+VVVI+S  +  VLERW FD+ C   A D                                  K+Q  I  EI+++IRQI+A+V FLP+L+ +C+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H V++ V+Y
Sbjct:    1 MAKQQSR-EQGITLRGSADIVAEFFSYGINSILYQRGIYPPETFTRAQQYGLTLLVTADPELQRYLCSVVDQLKDWLYKCSVQRLVVVISSIESNEVLERWQFDIECDKTAKDESAPRD----------------------------KSQKAIQDEIRSVIRQITATVTFLPLLETSCAFDLLIYTDKDLVVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSIVAY 199          
BLAST of Gvermi879.t1 vs. uniprot
Match: H0YUK6_TAEGU (HORMA domain-containing protein n=118 Tax=Neognathae TaxID=8825 RepID=H0YUK6_TAEGU)

HSP 1 Score: 189 bits (481), Expect = 2.970e-57
Identity = 102/228 (44.74%), Postives = 147/228 (64.47%), Query Frame = 0
Query:    2 APQQAASDHS-ISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSY 227
            A QQ   +H  I+L GSA+LVA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ V+TDP +  +L +V  QM+ WL+  +++R+VVVI+S  +  VLERW FD+ C   A D                                  K+Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H V+ +V+Y
Sbjct:    3 AQQQLGREHQGITLRGSAELVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELANYLNNVTEQMKEWLYKCTVQRLVVVISSIESSEVLERWQFDIECDKTAKDDNGPRE----------------------------KSQKAIQDEIRSVIRQITATVTFLPLLESACAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNTTVAY 202          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A1L1RLV7_CHICK (HORMA domain-containing protein n=17 Tax=Neognathae TaxID=8825 RepID=A0A1L1RLV7_CHICK)

HSP 1 Score: 187 bits (476), Expect = 1.590e-56
Identity = 99/228 (43.42%), Postives = 147/228 (64.47%), Query Frame = 0
Query:    1 MAPQQAASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSY 227
            MA Q +     I+L GSA++VA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ V+TDP ++ +L +V+ QM+ WL+  +++R+VVVI+S     VLERW FD+ C  +A                                    K+Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H V++ V+Y
Sbjct:    1 MAAQLSREQQGITLRGSAEIVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELKNYLNNVVEQMKEWLYKCTVQRLVVVISSIENNEVLERWQFDIECDKNA----------------------------RGESAPREKSQKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLVVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSMVAY 200          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A7K9ARJ9_DRONO (MD2L1 protein (Fragment) n=77 Tax=Aves TaxID=8782 RepID=A0A7K9ARJ9_DRONO)

HSP 1 Score: 187 bits (476), Expect = 1.590e-56
Identity = 100/228 (43.86%), Postives = 145/228 (63.60%), Query Frame = 0
Query:    1 MAPQQAASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSY 227
            MA Q       I+L GSA++VA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ V+TDP ++ +L +V+ QM+ WL+   ++R+VVVI+S     VLERW FD+ C   A D                                  K+Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H V++ V+Y
Sbjct:    1 MAKQIGRDQQGITLRGSAEIVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELKNYLNNVVEQMKEWLYKCIVQRLVVVISSIENNEVLERWQFDIECDKAAKDESTPRE----------------------------KSQKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSMVAY 200          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A8B9CEA5_9AVES (Mitotic arrest deficient 2 like 1 n=10 Tax=Anatidae TaxID=8830 RepID=A0A8B9CEA5_9AVES)

HSP 1 Score: 185 bits (469), Expect = 1.760e-55
Identity = 99/230 (43.04%), Postives = 145/230 (63.04%), Query Frame = 0
Query:    1 MAPQQAASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSYSV 229
            MA Q       I+L GSA++VA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ V+TD  ++ +L +V+ QM+ WL    ++R+VVVI+S  +  VLERW FD+ C   A D                                  K+Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H V++ V+Y +
Sbjct:    1 MAKQAVRDQQGITLRGSAEIVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDSELKNYLNNVVEQMKEWLCKCLVQRLVVVISSIESNEVLERWQFDIECDKTAKDESVPRE----------------------------KSQKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSMVAYKI 202          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A8C3EV11_9CORV (Mitotic arrest deficient 2 like 1 n=36 Tax=Passeriformes TaxID=9126 RepID=A0A8C3EV11_9CORV)

HSP 1 Score: 188 bits (478), Expect = 1.990e-55
Identity = 102/228 (44.74%), Postives = 146/228 (64.04%), Query Frame = 0
Query:    2 APQQAASDHS-ISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSY 227
            A QQ   +H  I+L GSA+LVA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ V+TDP +  +L +V  QM+ WL+   ++R+VVVI+S  +  VLERW FD+ C   A D                                  K+Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H V+ +V+Y
Sbjct:  110 AQQQLGREHQGITLRGSAELVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELANYLNNVTEQMKEWLYKCIVQRLVVVISSIESSEVLERWQFDIECDKTAKDDNGPRE----------------------------KSQKAIQDEIRSVIRQITATVTFLPLLESACAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNTTVAY 309          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A1S3IX77_LINUN (mitotic spindle assembly checkpoint protein MAD2A n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IX77_LINUN)

HSP 1 Score: 184 bits (467), Expect = 3.430e-55
Identity = 99/226 (43.81%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    7 ASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSYSVSD 231
            A   +I+L GS D+VA+FFSYG+N++LY RG+YPPETFS  QKYG+T+ V+TD  ++++L  VL Q++ WL++ +++++VVVI S  T  VLERW FD+ C   A D                                  K++A I  EI A+IRQI+A+V FLP+L+ AC FD+L+YTDK  + P  W E+GP+ I N++ V LRSF+T++H V A V Y   D
Sbjct:    6 AQKSAITLRGSTDIVAEFFSYGINSILYQRGIYPPETFSRCQKYGLTLLVTTDDTLKKYLAEVLAQIKEWLYSMTVQKLVVVIKSVDTAEVLERWQFDIECDKSAKDPGAKPRE---------------------------KSEADINKEISAVIRQITATVTFLPLLETACVFDLLVYTDKDLDVPDSWGESGPQFISNSEEVRLRSFTTTIHKVDAMVCYKKDD 204          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A8D0GVY0_SPHPU (Mitotic arrest deficient 2 like 1 n=5 Tax=Amniota TaxID=32524 RepID=A0A8D0GVY0_SPHPU)

HSP 1 Score: 184 bits (466), Expect = 5.010e-55
Identity = 96/227 (42.29%), Postives = 146/227 (64.32%), Query Frame = 0
Query:    4 QQAASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSYSV 229
            +Q + +  I+L GSA++VA+FFSYG+N++LY RG+YP ETF+  QKYG+T+ V+TDP ++ +L +V+ Q++ WL+   ++R+VVVI+S  +  VLERW FD+ C   A D                                  ++Q  I  EI+++IRQI+ASV FLP+L+  C+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H VS+ V+Y +
Sbjct:    3 KQLSREQGITLRGSAEIVAEFFSYGINSILYQRGIYPSETFTRVQKYGLTLLVTTDPELKNYLNNVVEQLKDWLYKCLVQRLVVVISSIESSEVLERWQFDIECDRSAKDDGAPRE----------------------------RSQKAIQDEIRSVIRQITASVTFLPLLETTCAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVSSMVAYRI 201          
BLAST of Gvermi879.t1 vs. uniprot
Match: A0A663MIW6_ATHCN (HORMA domain-containing protein n=10 Tax=Neognathae TaxID=8825 RepID=A0A663MIW6_ATHCN)

HSP 1 Score: 183 bits (464), Expect = 8.880e-55
Identity = 98/228 (42.98%), Postives = 143/228 (62.72%), Query Frame = 0
Query:    1 MAPQQAASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLERWAFDV-CVSDAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKNQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGPRTIPNAQNVTLRSFSTSVHDVSASVSY 227
            MA Q       I+L GSAD+VA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ V+TD  ++ +L +V+ QM+ W++   ++R+VVVI+S     VLERW FD+ C   A D                                  K+   I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK    P KW+E+GP+ I N++ V LRSF+T++H V++ V+Y
Sbjct:    1 MAKQLGRDQQGITLRGSADIVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDSELKNYLNNVVEQMKEWMYKCIVQRLVVVISSIDDNEVLERWQFDIECDKTAKDESAPRE----------------------------KSHKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLVVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSMVAY 200          
The following BLAST results are available for this feature:
BLAST of Gvermi879.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ4_9FLOR4.290e-8763.39Mitotic spindle assembly checkpoint protein MAD2A ... [more]
A0A7M4EA82_CROPO9.520e-5845.18Mitotic arrest deficient 2 like 1 n=2 Tax=Longiros... [more]
H0YUK6_TAEGU2.970e-5744.74HORMA domain-containing protein n=118 Tax=Neognath... [more]
A0A1L1RLV7_CHICK1.590e-5643.42HORMA domain-containing protein n=17 Tax=Neognatha... [more]
A0A7K9ARJ9_DRONO1.590e-5643.86MD2L1 protein (Fragment) n=77 Tax=Aves TaxID=8782 ... [more]
A0A8B9CEA5_9AVES1.760e-5543.04Mitotic arrest deficient 2 like 1 n=10 Tax=Anatida... [more]
A0A8C3EV11_9CORV1.990e-5544.74Mitotic arrest deficient 2 like 1 n=36 Tax=Passeri... [more]
A0A1S3IX77_LINUN3.430e-5543.81mitotic spindle assembly checkpoint protein MAD2A ... [more]
A0A8D0GVY0_SPHPU5.010e-5542.29Mitotic arrest deficient 2 like 1 n=5 Tax=Amniota ... [more]
A0A663MIW6_ATHCN8.880e-5542.98HORMA domain-containing protein n=10 Tax=Neognatha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003511HORMA domainPFAMPF02301HORMAcoord: 17..207
e-value: 1.4E-20
score: 73.9
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 15..225
score: 40.460125
IPR036570HORMA domain superfamilyGENE3D3.30.900.10HORMA domaincoord: 4..231
e-value: 2.0E-66
score: 225.1
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 11..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..148
IPR027097Mitotic spindle checkpoint protein Mad2PANTHERPTHR11842:SF11MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Acoord: 4..229
IPR045091Mad2-likePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 4..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:788091..788789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi879.t1Gvermi879.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 788091..788789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi879.t1 ID=Gvermi879.t1|Name=Gvermi879.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=233bp
MAPQQAASDHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKY
GVTVYVSTDPAVQRFLQSVLTQMRTWLHTSSLRRVVVVIASAATKTVLER
WAFDVCVSDAPDASDAPAAPGAPDTPDAAKAADAAGPASAPSPPSTKNQA
TIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKSTETPAKWQETGP
RTIPNAQNVTLRSFSTSVHDVSASVSYSVSDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003511HORMA_dom
IPR036570HORMA_dom_sf
IPR027097Mad2
IPR045091Mad2-like