Gvermi8207.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8207.t1
Unique NameGvermi8207.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length203
Homology
BLAST of Gvermi8207.t1 vs. uniprot
Match: A0A2V3IIH3_9FLOR (rRNA-processing protein fcf2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIH3_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 3.570e-71
Identity = 115/195 (58.97%), Postives = 150/195 (76.92%), Query Frame = 0
Query:    9 VEGLSLPASKELFAQTNLDTTETFVKQDLDFLRSGRNRRQRKK-NNAPQPDWSKLEESVTQQKAEP-VRNDLEDDENWHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSERINNRRIVDPA-FKRRKHRK 200
            + GL LP +K L+ ++ LD  +  V Q+L FL     RR RK     P  +W+++E  + + K  P V+    +D++WHEMP A+LTPELQRDLR+IENRQ+LDPKRFYKSSGTGRKKG+LP+ VQVGT+LSGAHEF+SGRL K+ERRARIIDQVL+S++T+HY  SR++KLQS+R+ NRRIVDPA  K+R+ RK
Sbjct:   16 LNGLKLPTTKLLYQESQLDRQQKLVGQELHFLNRSTERRSRKTPQQVPPANWAEIEHDLKEAKPPPSVQTTFIEDDHWHEMPAANLTPELQRDLRIIENRQHLDPKRFYKSSGTGRKKGQLPTHVQVGTVLSGAHEFFSGRLLKRERRARIIDQVLASKETMHYTKSRYQKLQSDRMANRRIVDPAAMKKRRRRK 210          
BLAST of Gvermi8207.t1 vs. uniprot
Match: R7QDL7_CHOCR (Fcf2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDL7_CHOCR)

HSP 1 Score: 172 bits (436), Expect = 7.660e-51
Identity = 93/193 (48.19%), Postives = 131/193 (67.88%), Query Frame = 0
Query:   14 LPASKELFAQTNLDTTETFVKQDLDFLRSGRNRRQRKKNNAPQPDWSKLEESV-----TQQKAEPV----RNDLEDDENWHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSERINNRRIVDPAFKRRK 197
            LPA+  LFA + LD  E   K ++ FL    N +++ + +  Q +W  L+ES+     T  K+ P+    R   E D  WHE+P A +TP+LQ DLRVIENRQ+LDPKRFYKSSG+GR+KG+LPS+V VGT++ GAHEFYS RL++KERR  I+D+V+S  +  +Y  ++F+ +Q  R  N R+VDPA K+R+
Sbjct:   20 LPATASLFADSPLDVEEKAAKSEVGFLFP--NHQEKPQKSTTQGNWKALDESLSGETATALKSPPMSASARRAAETD--WHEIPEARMTPQLQNDLRVIENRQHLDPKRFYKSSGSGRRKGQLPSKVHVGTVVVGAHEFYSARLTRKERRRTILDEVMSDGRITNYTKNKFKSIQKARQGNTRVVDPAAKKRR 208          
BLAST of Gvermi8207.t1 vs. uniprot
Match: A0A3N4IQF9_ASCIM (Fcf2-domain-containing protein n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IQF9_ASCIM)

HSP 1 Score: 98.2 bits (243), Expect = 1.000e-21
Identity = 46/105 (43.81%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   83 NWHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSERINNRR 187
            NW +MP  DLTPEL+RDL++++ R  +DPKRFYK      K+   P   QVGTI+ GA EF+S RL++KER+  I+D+V+S +K+ +    +++++QS+  + R+
Sbjct:  120 NWFDMPRTDLTPELKRDLQILKMRAVIDPKRFYKKD----KQAGFPKYSQVGTIVEGATEFFSARLTRKERKRNILDEVISDKKSRNRLKEKYQEVQSKNRSGRK 220          
BLAST of Gvermi8207.t1 vs. uniprot
Match: A0A397U2L9_9GLOM (Fcf2 pre-rRNA processing-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U2L9_9GLOM)

HSP 1 Score: 92.8 bits (229), Expect = 1.390e-20
Identity = 42/96 (43.75%), Postives = 65/96 (67.71%), Query Frame = 0
Query:   84 WHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQ 179
            W +MP  +LTPE++RDL++I+ R  LDPKRFYK   +     ELP   Q+GT++ G  EFYS RL++KER+  I+D++++ E+   Y   +F ++Q
Sbjct:   27 WFDMPKPELTPEIKRDLQIIKMRNVLDPKRFYKKDNSK----ELPKYFQIGTVIEGPTEFYSSRLTRKERKKTIVDELMADEEAKKYYKRKFLEIQ 118          
BLAST of Gvermi8207.t1 vs. uniprot
Match: A0A7S4AE67_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AE67_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.390e-20
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0
Query:   84 WHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSERINNRRIVDPAFKRRK 197
            W  M  + +T +L+ DL +I NR YLDPKRFYKS+    K       VQVGT++ GA EFYS RL+KKERRA + +++++ +KT  YA ++F+K+  E+     +  P  + RK
Sbjct:  206 WFGMKPSAMTEDLKTDLAIIRNRTYLDPKRFYKSTDKHHKI------VQVGTVIEGASEFYSSRLTKKERRANLTEELMADKKTSDYAKNKFKKMAREKAYQAELRKPKKRARK 313          
BLAST of Gvermi8207.t1 vs. uniprot
Match: A0A2J6RZ57_9HELO (Fcf2-domain-containing protein n=3 Tax=Hyaloscypha hepaticicola/Rhizoscyphus ericae species complex TaxID=186449 RepID=A0A2J6RZ57_9HELO)

HSP 1 Score: 93.2 bits (230), Expect = 6.050e-20
Identity = 41/105 (39.05%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   83 NWHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSERINNRR 187
            NW+ +P  +LTPEL+RDL+++  R  LDPKRFYK   +   K ++P   QVGTI+ G  E++SGRL+ KER+  +++++L+ EK      S+++++Q  + + ++
Sbjct:  102 NWYNLPRTNLTPELKRDLQLLRMRDVLDPKRFYKKENS---KPQIPEFSQVGTIIEGPTEYFSGRLTNKERKRTLVEEILAGEKETGRFKSKYQQIQEAKTSGKK 203          
BLAST of Gvermi8207.t1 vs. uniprot
Match: A0A074ZFU4_AURSE (Fcf2 domain-containing protein (Fragment) n=1 Tax=Aureobasidium subglaciale (strain EXF-2481) TaxID=1043005 RepID=A0A074ZFU4_AURSE)

HSP 1 Score: 89.7 bits (221), Expect = 8.620e-20
Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:   82 ENWHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSE 181
            E W+ MP  DLTPEL+RDL++++ R  LDP R YK  G    K   P   QVGTI+ G  E++SGRL+ KER+   +D+VLS EK     T RF+K  S+
Sbjct:    7 EQWYNMPRTDLTPELKRDLQLLKMRNVLDPHRHYKKDGG---KMRAPDYSQVGTIVEGPTEYFSGRLNNKERKKTFVDEVLSREKD----TGRFKKKYSD 99          
BLAST of Gvermi8207.t1 vs. uniprot
Match: B5Y3V5_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3V5_PHATC)

HSP 1 Score: 89.7 bits (221), Expect = 1.130e-19
Identity = 41/99 (41.41%), Postives = 66/99 (66.67%), Query Frame = 0
Query:   83 NWHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSE 181
            NW  M  A +T +L++D+ +I +R YLDPKRFYKSS    K       VQVGT++ G  EF+S RL+KK+RR  ++D++++   +  YA ++++++Q E
Sbjct:   11 NWFNMKPAAMTEDLKKDIALIRSRNYLDPKRFYKSSDPTGKF------VQVGTVIEGPTEFFSSRLTKKQRRGNLVDEIMADPASADYAKNKYKRMQQE 103          
BLAST of Gvermi8207.t1 vs. uniprot
Match: A0A0L0HPU2_SPIPD (Fcf2 domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HPU2_SPIPD)

HSP 1 Score: 92.8 bits (229), Expect = 1.300e-19
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 0
Query:   55 PQPDWSKLEESVTQQKAEPVRNDLEDDENWHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSERINNRRIVDPAFKRRKHRK 200
            P  DW K ++ + +++    +        W +MP  D+T E++RDL ++++R  +DPKR YK    G  K  LP   Q+GTI+ G  EF+S RL++KERR  I+D++L+  +   Y   +F ++Q ++ N        FKRRK RK
Sbjct:  111 PALDWDKKKKKIMEKETAGPK--------WFDMPAPDMTEEIKRDLHILKSRAVIDPKRHYKK---GTMKA-LPKFFQIGTIVQGPTEFFSSRLTRKERRDNIVDELLADNQAKSYYKRKFLEIQEQKNN---FTRKGFKRRKDRK 241          
BLAST of Gvermi8207.t1 vs. uniprot
Match: I1IEJ6_BRADI (Fcf2 domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IEJ6_BRADI)

HSP 1 Score: 91.7 bits (226), Expect = 1.420e-19
Identity = 40/99 (40.40%), Postives = 65/99 (65.66%), Query Frame = 0
Query:   84 WHEMPVADLTPELQRDLRVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSKKERRARIIDQVLSSEKTVHYATSRFEKLQSER 182
            W +MP   +TPEL++DL +++ R  +DPKR +K SG   K   LP   Q+GT++  AHEF+S RL+K+ER+  ++D++LS +K  +Y   +  ++Q  R
Sbjct:   78 WFDMPAPSITPELKKDLHILQLRHVMDPKRHFKRSG---KSKVLPKYFQIGTVIEPAHEFWSSRLTKRERKTTLVDELLSDQKLKNYRMGKVREIQETR 173          
The following BLAST results are available for this feature:
BLAST of Gvermi8207.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIH3_9FLOR3.570e-7158.97rRNA-processing protein fcf2 n=1 Tax=Gracilariopsi... [more]
R7QDL7_CHOCR7.660e-5148.19Fcf2 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A3N4IQF9_ASCIM1.000e-2143.81Fcf2-domain-containing protein n=1 Tax=Ascobolus i... [more]
A0A397U2L9_9GLOM1.390e-2043.75Fcf2 pre-rRNA processing-domain-containing protein... [more]
A0A7S4AE67_9STRA4.390e-2042.98Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A2J6RZ57_9HELO6.050e-2039.05Fcf2-domain-containing protein n=3 Tax=Hyaloscypha... [more]
A0A074ZFU4_AURSE8.620e-2048.00Fcf2 domain-containing protein (Fragment) n=1 Tax=... [more]
B5Y3V5_PHATC1.130e-1941.41Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A0L0HPU2_SPIPD1.300e-1935.62Fcf2 domain-containing protein n=2 Tax=Spizellomyc... [more]
I1IEJ6_BRADI1.420e-1940.40Fcf2 domain-containing protein n=1 Tax=Brachypodiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014810Fcf2 pre-rRNA processing, C-terminalPFAMPF08698Fcf2coord: 80..172
e-value: 1.1E-26
score: 93.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..82
IPR039883Fcf2/DNTTIP2PANTHERPTHR21686UNCHARACTERIZEDcoord: 49..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1566938..1567546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8207.t1Gvermi8207.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1566938..1567546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8207.t1 ID=Gvermi8207.t1|Name=Gvermi8207.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=203bp
MVVENDNVVEGLSLPASKELFAQTNLDTTETFVKQDLDFLRSGRNRRQRK
KNNAPQPDWSKLEESVTQQKAEPVRNDLEDDENWHEMPVADLTPELQRDL
RVIENRQYLDPKRFYKSSGTGRKKGELPSRVQVGTILSGAHEFYSGRLSK
KERRARIIDQVLSSEKTVHYATSRFEKLQSERINNRRIVDPAFKRRKHRK
RR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014810Fcf2_C
IPR039883Fcf2/DNTTIP2