Gvermi8141.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8141.t1
Unique Name	Gvermi8141.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	442

Homology

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BLAST of Gvermi8141.t1 vs. uniprot
Match: A0A2V3IYX2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYX2_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 5.400e-32
Identity = 90/177 (50.85%), Postives = 119/177 (67.23%), Query Frame = 0

Query:  265 PSGTLQDAKQDGEGTLANEQES-REGAVVRRVLKRMAKKTSDIPSVLSRICGEPSGQS-SGENVNVPDGVEKR-GTKRKNEGAGSEEELKKLRRVRNRESVEKCRAKQRMRLEKLEEEDKALRAECELMRQMAEVFHEKWKAVAEEYRRICGKDAGECPLVIPSNIELPEVATLSTG 438
            PSG LQ A++         +++ + GAVV+RVLKR+AK  S+I   ++R+   P  Q  S +  N    V KR  T+ KNE     EELKK+RRVRNRESVEKCRAKQ++RLEKLE+E+KALRAEC LM Q+AE     W AVA E+ RI GK+AG CPL++P ++ L +++T S G
Sbjct:  263 PSGILQTAQKTHRDINGERKQAPKGGAVVQRVLKRIAKSNSNISETINRLKVMPMHQHVSKQTRNDEKQVRKRITTEEKNE-----EELKKIRRVRNRESVEKCRAKQKLRLEKLEKEEKALRAECILMSQVAESLQRNWAAVAMEFERITGKEAGRCPLIMPPDVGLADMSTGSNG 434

[Close]

BLAST of Gvermi8141.t1 vs. uniprot
Match: A0A2V3IGR2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGR2_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 1.000e-8
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0

Query:  384 RAECELMRQMAEVFHEKWKAVAEEYRRICGKDAGECPLVIPSNIELPEVATLSTGDGC 441
            R EC LMR++AE    KW A+A EY+RI GK+AGECP+ IP +I LPE+ T+S   GC
Sbjct:  376 RQECILMREVAESIQSKWAAIAAEYKRITGKEAGECPMSIPPDIVLPELTTMS---GC 430

The following BLAST results are available for this feature:

BLAST of Gvermi8141.t1 vs. uniprot

BLAST of Gvermi8141.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IYX2_9FLOR	5.400e-32	50.85	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IGR2_9FLOR	1.000e-8	56.90	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 359..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..289
None	No IPR available	CDD	cd14686	bZIP	coord: 351..392 e-value: 1.01569E-7 score: 46.3845
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 351..401

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:1216374..1217699 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8141.t1	Gvermi8141.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 1216374..1217699 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8141.t1 ID=Gvermi8141.t1|Name=Gvermi8141.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=442bp
MSTPNDYLNFGTSPDPLSELPSQAVLEYLNNTSAQGEELVNVPDTGADYL
PSLSLPLDHLGLLPVPRQTPPLSAQFTADDFLEFMKANGSQPGAATEQGG
ENAQGNGAEPNAPKFVRSVSDVTVDMLHRNRSATGKEHQAVGSEAVLNWF
PTLNQQSQTLPTVSAIPVMRHGNTMPAPLPSQGASGSGYGTNTVAAAPPH
RRYVSGGRLFSIPREPGHAQVGIGAESGDGKRLQIAEPRALRVNAEPLDG
IQKVVPGDLAPPGHPSGTLQDAKQDGEGTLANEQESREGAVVRRVLKRMA
KKTSDIPSVLSRICGEPSGQSSGENVNVPDGVEKRGTKRKNEGAGSEEEL
KKLRRVRNRESVEKCRAKQRMRLEKLEEEDKALRAECELMRQMAEVFHEK
WKAVAEEYRRICGKDAGECPLVIPSNIELPEVATLSTGDGC*