Gvermi8005.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8005.t2
Unique NameGvermi8005.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length562
Homology
BLAST of Gvermi8005.t2 vs. uniprot
Match: A0A2V3IEY1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY1_9FLOR)

HSP 1 Score: 630 bits (1624), Expect = 3.960e-220
Identity = 319/544 (58.64%), Postives = 403/544 (74.08%), Query Frame = 0
Query:    1 MQLRVSAKPSALAVVIGVIELLLSEFFKFTSDAAAAWHRRRKLYRTGRFRIRSNPFLRNPDTFFSSALLAVLLALTLVLELSISSATFPDSSRVPRSHNIRCFGPKRETRYFNKHGPRTSELGDDRVAAYVTQANCRDSLIDLSIQGPAALGQGYPGCLPPFESQAVDVVLAIQGGAVGFVANSEAGDPHLDYGIERDGEIAAPDMGEELAGTSFWHVMMRSKGGSVAFWTFGEQNASQRIASNLGIPTHFLEDSPQSFDAESVANVSCFSNSLTCFLEAGRQALAATAVLRKYEEDNLGVLVSSLKDVQSSLCIFESRMQVEVSWVYLNLFIPEVERNGRNGPTITRLKIKGNARCLPRLPRQSARMYLDSMERIDLNETMNATEEATFDNMRDVLQKAAVITGLKTLPGEGVPCQPKGVVNGSTVGTAELVATLVFSAVLLVTAVILMASSVVAHCTCPIRTDPFNALWPVQLLV-EQRGTNDDELRDACE-----PRGGSDSRDTAESATLARDI-FSNAEDLWVGVSAQDGSVRLTAHTS 537
            M+LR+SAKPS LAV+IGVIEL+LSE FK T+D A+AWHRR++LY  GRFR+R+NP+L+   T+ ++ LL VLL LT+VLELSI SA FP SSRVP    +RCFGP R+TRYFNK GPR SEL DDRVA+Y+ QA C   ++DLS+QG AAL  GYPGCLP F S+  D VL IQGGAVGFV NSEAGDPHLDYG+ERDGEI +PD+G+ LAGTSFW + +   G SVAFW+FG     +R+ +NL IP  F++D+P+ F AES ANV+C SN+  C+     +AL+   V+R Y E+ L V++SSLK+  SSLCIF+S M ++VSW+YLNLFIP+VER+GRNGP I RL+I+G ARC+ +LPRQS+RMYLD+MER+ LNET+N T+ A+FD+ RDVLQ+AAVI G+KTLP EGVPCQP  V+ GSTVG AEL+ T VFSA+LL+  V L A ++ A  +CP+R DP N LWPVQLLV E R   +D LR   +       GG+  R         R +  S+A+DLWVG+  + G   LTAH+S
Sbjct:    1 MELRISAKPSVLAVIIGVIELILSELFKLTADCASAWHRRKQLYHNGRFRVRANPYLQQRHTYLTTGLLFVLLVLTIVLELSIDSAAFPSSSRVPIDQGVRCFGPTRDTRYFNKRGPRNSELDDDRVASYIKQAGCGQGMLDLSVQGAAALETGYPGCLPGFASREFDEVLGIQGGAVGFVGNSEAGDPHLDYGVERDGEIVSPDVGDMLAGTSFWLLSIWGLGKSVAFWSFGGGRVEERVGTNLAIPKRFIDDTPKVFRAESTANVTCTSNARECYDMVRPKALSVDPVVRSYRENTLAVVISSLKNHDSSLCIFDSSMDMQVSWIYLNLFIPDVERDGRNGPAIVRLRIRGRARCMSKLPRQSSRMYLDAMERVVLNETLNTTDTASFDSARDVLQRAAVIIGMKTLPEEGVPCQPLAVMEGSTVGAAELIVTAVFSALLLLFVVALFAMTIAAQRSCPVRVDPLNPLWPVQLLVAETREREEDNLRAGSDGPPDVSMGGTAQRRVRALRRHTRSLQLSSADDLWVGLEDEGGVTHLTAHSS 544          
BLAST of Gvermi8005.t2 vs. uniprot
Match: A0A2V3IEY7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY7_9FLOR)

HSP 1 Score: 205 bits (521), Expect = 9.100e-56
Identity = 164/487 (33.68%), Postives = 239/487 (49.08%), Query Frame = 0
Query:    5 VSAKPSALAVVIGVIELLLSEFFKFTSDAAAAWHRRRKLYRTGRFRI----RSNPFLRNPDTFFSSALLAVLLALTLVLELSISSATFPDSSRVPRSHNIRCFGPKRETRYFNKHGPRTSELGDDRVAAYVTQANCRDSLIDLSIQGPAALGQGYPGCLPPF-ESQAVDVVLAIQGGAVGFVANSEAGDPHLDY-----GIERDGEIAAPDMGEELAGTSFWHVMMRSKGGSVAFWTFGEQNASQRIASNLGIPTHFLEDSPQSFDAESVANVSCFSNSLTCFLEAGRQALAATAVLRKYEEDNLGVLVSSLKDVQSSLCIFESRMQVEVSWVYLNLFIPE-VERNGRNGPTITRLKIKGNARCLPRLPRQSARMYLDSMERIDLNETMNATEEATFDNMRDVLQKAAVITGLKTLPGEGVPCQPKGVVNGSTVGTAELVATLVFSAVLLVTAVILMASSVVAHCTCPIRTDPFNALWPVQLLVEQR 480
            V   P+ LAVVIGVIELL+ E F+   +AA A  RR KL R GR  +    R N +L+   T  S  L+ V++    +LELSI      ++    R+   +CF P+R TRY+   GP  SE  D R   Y+ Q  C DSL+  +I G + L  GYP C   F  ++   +   +QG  VGFV+ S AGD H D      G  R            LAGT+F  V+      S  F  F ++ A QR  SN  IP+ ++ +S       S   V C S  L C+  +  +A  A   +R+      GV +  L++  SS+C+FES MQ    W+ +N  +P   ER+ R GP +T  +++GNARC+ RL    AR++ D++E          T       + + LQ+  V TG+KT     VPC     + GS++ T  LVA  V S +L+V + + M  +V  H +   + DP   +W +  ++  R
Sbjct:    4 VPTTPATLAVVIGVIELLILEAFRTLLNAALAARRRVKLSRLGRLHLYSAARQNDWLQLWITVVSITLVVVVI----ILELSIDGLILRNTGSRIRA---QCFAPERLTRYWGGFGPSASEADDTRFGQYLEQTACGDSLLRSAISGTSGLQIGYPQCTARFGPARPRQLSFELQGCGVGFVSASSAGDFHCDLLPVGIGFPRT-----------LAGTNFVAVLETGHNSSSDF-EFNDEPA-QRYLSNSRIPSSWMLNS-----TGSSVEVPCTSLGLDCYTLSRERAATAPKSVRQSTAP-AGVYIQVLENGNSSVCLFESGMQSRAEWLEMNQLLPGGEERDSRRGPVLTAFQVRGNARCIERLDAAVARLHYDAVE---------FTTGPPESGLLEWLQRHVVATGIKTAVENEVPCTVFEAIEGSSISTGWLVAASVLSGLLIVVSGVAMGYAVWTHFSKAAKQDPLTPIWSMWEVLRAR 455          
The following BLAST results are available for this feature:
BLAST of Gvermi8005.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEY1_9FLOR3.960e-22058.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEY7_9FLOR9.100e-5633.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..561
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..431
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 432..456
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 457..561
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 433..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:615766..617451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8005.t2Gvermi8005.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 615766..617451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8005.t2 ID=Gvermi8005.t2|Name=Gvermi8005.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=562bp
MQLRVSAKPSALAVVIGVIELLLSEFFKFTSDAAAAWHRRRKLYRTGRFR
IRSNPFLRNPDTFFSSALLAVLLALTLVLELSISSATFPDSSRVPRSHNI
RCFGPKRETRYFNKHGPRTSELGDDRVAAYVTQANCRDSLIDLSIQGPAA
LGQGYPGCLPPFESQAVDVVLAIQGGAVGFVANSEAGDPHLDYGIERDGE
IAAPDMGEELAGTSFWHVMMRSKGGSVAFWTFGEQNASQRIASNLGIPTH
FLEDSPQSFDAESVANVSCFSNSLTCFLEAGRQALAATAVLRKYEEDNLG
VLVSSLKDVQSSLCIFESRMQVEVSWVYLNLFIPEVERNGRNGPTITRLK
IKGNARCLPRLPRQSARMYLDSMERIDLNETMNATEEATFDNMRDVLQKA
AVITGLKTLPGEGVPCQPKGVVNGSTVGTAELVATLVFSAVLLVTAVILM
ASSVVAHCTCPIRTDPFNALWPVQLLVEQRGTNDDELRDACEPRGGSDSR
DTAESATLARDIFSNAEDLWVGVSAQDGSVRLTAHTSQTATLATPGRGSR
DAAHSRSTTSS*
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