Gvermi7998.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7998.t1
Unique NameGvermi7998.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length209
Homology
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BLAST of Gvermi7998.t1 vs. uniprot
Match: A0A2V3J4F8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F8_9FLOR)

HSP 1 Score: 228 bits (582), Expect = 6.750e-73
Identity = 130/208 (62.50%), Postives = 152/208 (73.08%), Query Frame = 0 
Query:    1 MAFVSSFTANSFAKPTARSFTLHRNVCPHASHKNGAGDDDSQNFRPLDPPFNN---SFQPFDGSKPLLPPWRPSSLEDEFGYSAKRVVSRER-SQPAFRKIVKVEKAGFATMFAEVVQELDDENGRIWLRPLLLTNHCKDTAVDLRGAADVVLDKKSVCEVDSETKLRLSVNLIATEEDVVDRVVSDERWGEVGTNAVLAFMKRLAEG 204
            MAFVSSFT  +FA    R++  + +V P  S +  A +    NF  L P   +    F+ FDGSKPLLPPWRP SLE EF YSA+RV SRE+ +    R IVKVEK GFATMFAEVVQELDD  GRIWLRPLL+ +H +D  VDLRGA DVVL+K SV +VDSETKLRLSVNL+ATEEDVV RVVSDE W +V TNAVL F+K+L+EG
Sbjct:    1 MAFVSSFTG-AFASSRGRAWLNNSSVRPAISPQACAKNPGGHNFDELPPIHRHHRREFERFDGSKPLLPPWRPESLEAEFNYSARRVESREKGADRRLRNIVKVEKLGFATMFAEVVQELDDGKGRIWLRPLLMDSHGQDGFVDLRGATDVVLEKTSVSDVDSETKLRLSVNLMATEEDVVGRVVSDENWDKVSTNAVLTFLKKLSEG 207
The following BLAST results are available for this feature:
BLAST of Gvermi7998.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4F8_9FLOR6.750e-7362.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..208
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:596769..597395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7998.t1Gvermi7998.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 596769..597395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7998.t1 ID=Gvermi7998.t1|Name=Gvermi7998.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=209bp
MAFVSSFTANSFAKPTARSFTLHRNVCPHASHKNGAGDDDSQNFRPLDPP
FNNSFQPFDGSKPLLPPWRPSSLEDEFGYSAKRVVSRERSQPAFRKIVKV
EKAGFATMFAEVVQELDDENGRIWLRPLLLTNHCKDTAVDLRGAADVVLD
KKSVCEVDSETKLRLSVNLIATEEDVVDRVVSDERWGEVGTNAVLAFMKR
LAEGKECI*
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