Gvermi7990.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7990.t1
Unique NameGvermi7990.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length195
Homology
BLAST of Gvermi7990.t1 vs. uniprot
Match: A0A2V3IQ40_9FLOR (Methylmalonic aciduria and homocystinuria type D protein, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ40_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 2.840e-41
Identity = 78/176 (44.32%), Postives = 105/176 (59.66%), Query Frame = 0
Query:   17 RIRAHTVVAPSMSERFDGLQYSAHTAGSLLRRELHTIFPEAPRDAADLTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWARAVRDALHAGHAERDERPWVEAADPASGLAAWGRGTGVYAEVDGAARLLGYATDAVGGCAVVRHPQWGLSVYLATMFTTARPDAVGSALQCVN 192
            R  A TV+ P++S+ F+GL+YS H   + +RREL T+FP    D   + V+ T+Q+    L+S+G  QA EKDR L+RF  W  AV+ A+      + E  W++A DPASG+A WG   GVY EVDG AR LGY    VG C ++ HP W    Y AT+F  AR + +  AL  VN
Sbjct:    8 RRAADTVLHPTLSDAFEGLEYSVHVPAASVRRELKTVFPGT--DVGQILVVPTVQQARCSLLSWGEEQAEEKDRLLERFVRWCEAVKKAVL-----KRETAWIDAVDPASGVALWGGAAGVYNEVDGFARTLGYDVQLVGSCPILEHPAWRFRSYPATLFCAARRNTLLHALAEVN 176          
BLAST of Gvermi7990.t1 vs. uniprot
Match: A0A061SLZ4_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SLZ4_9CHLO)

HSP 1 Score: 109 bits (272), Expect = 6.540e-27
Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = 0
Query:   33 DGLQYSAHTAGSLLRRELHTIFPEAPRDAADLTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWARAVRDALHA-GHAERDERPWVEAADPASGLAAWGRGTGVYAEVDGAARLLGYATDAVGGCAVVRHPQWGLSVYLATMFTTARPDAVGSAL 188
            +GL+YS H   + +RRE+  +FP+   D   + VI T Q+ D  L+  G A   EKDR L+RF +WA+ V + L + G+       W +  DP SGL     G  VY+EVD    LLGY T   G C ++ HPQWG SVY A++FT A  + +  A+
Sbjct:   14 NGLEYSVHELPAKIRREVAYVFPDV--DLQGMLVIPTCQKSDQDLVQMGEAVENEKDRLLERFVDWAKPVCEKLISWGY-------WADYIDPCSGLPMISPGQSVYSEVDALTALLGYKTQNAGCCKILLHPQWGSSVYPASLFTKAPAEKLLEAI 161          
BLAST of Gvermi7990.t1 vs. uniprot
Match: A0A4P9Y540_9FUNG (Uncharacterized protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y540_9FUNG)

HSP 1 Score: 110 bits (275), Expect = 9.720e-27
Identity = 69/158 (43.67%), Postives = 85/158 (53.80%), Query Frame = 0
Query:   35 LQYSAHTAGSLLRRELHTIFPEAPR--DAADLTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWARAVRDALHA-GHAERDERPWVEAADPASGLAAWGR-GTGVYAEVDGAARLLGYATDAVGGCAVVRHPQWGLSVYLATMFTTARPDAVGSAL 188
            LQYS H      RR L  IFP  P   DA  L ++ T Q    P++S+    AAEKD  L  F  WA  +  ALHA GH       W +  DPASGL    + G   Y +V+GA RLL YAT  +GGC ++ HP+WG  VY  T+FTTA   AV S +
Sbjct:   53 LQYSIHACPRSFRRTLQLIFPSLPSGPDAPTLHILPTFQPTSCPILSWTPEAAAEKDHLLLTFTTWANRLTLALHAEGH-------WADLTDPASGLPVHTQQGPSFYPDVEGAERLLRYATVDIGGCRLLEHPKWGSRVYPGTLFTTAPIRAVLSCM 203          
BLAST of Gvermi7990.t1 vs. uniprot
Match: A0A1R1WYI8_9FUNG (Methylmalonic aciduria and homocystinuria type D-like protein, mitochondrial n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1WYI8_9FUNG)

HSP 1 Score: 82.8 bits (203), Expect = 2.620e-16
Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 0
Query:   35 LQYSAHTAGSLLRRELHTIFPEAPRDAA-DLTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWARAVRDALHA-GHAERDERPWVEAADPASGLAAWGR-GTGVYAEVDGAARLLGYATDAVGGCAVVRHPQWGLSVYLATMFTTARPDAVGSAL 188
            +QYS +      + E+  IFP   RD   DL +I T Q+    L+ +      EKD  L  F+ +  ++   L++ G+       W +   PASGL  +   G+ +Y+EVD   +LL Y T  VG C V+ HP+W LS Y AT FTTA  D + S L
Sbjct:   41 MQYSIYKMPKQFKAEIILIFPSLQRDKLKDLLIIPTFQKTFCSLVEWSEDTKNEKDSKLLNFYAFGYSILTKLNSMGY-------WFDIICPASGLPVFTTSGSTIYSEVDCCKKLLNYNTVNVGMCNVIAHPEWALSNYPATAFTTAPEDVILSVL 190          
BLAST of Gvermi7990.t1 vs. uniprot
Match: A0A1Y2CRG0_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CRG0_9FUNG)

HSP 1 Score: 82.4 bits (202), Expect = 1.600e-15
Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 0
Query:   56 EAPRDAAD-LTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWARAVRDALHAGHAERDERPWVEAADPASGLAAWG-RGTGVYAEVDGAARLLGYATDAVGGCAVVRHPQWGLSVYLATMFTTARPDAVGSALQ 189
            +AP+   D L V+ T QR ++ LM        E++  L+ F  W R V   + A      +  W +  DP SG   +  RGT +Y +VDGAARLL Y T  VG C ++ HP WG   Y AT+FTT   D +   L+
Sbjct:  143 QAPQMTPDNLIVVQTFQRSNSDLMVINDESNNERNLLLETFSAWGRYVISRIRA------QGFWADMTDPCSGYPVYTPRGTSLYPDVDGAARLLKYNTHLVGCCRIISHPVWGTRNYPATLFTTCPVDLLAVVLE 272          
BLAST of Gvermi7990.t1 vs. uniprot
Match: A0A7S2FSY7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSY7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.960e-11
Identity = 54/172 (31.40%), Postives = 81/172 (47.09%), Query Frame = 0
Query:   20 AHTVVAPSMSERFDGLQYSAHTAGSLLRRELHTIFPEAPRDAADLTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWARAVRDALHA-GHAERDERPWVEAADPASGLAAWGRGTG-VYAEVDGAARLLGYATDAVGGCAVVRHPQWGLSVYLATMFTTARPDAVGSALQ 189
            ++ ++ P M  R  GL+ S       +RREL  +F        D   I T Q  +  L++ G     EKDR L  F ++ +A+ + L + G+       W +  DP SGL         VY+EVDG   L+ Y       C ++ HP+WG +VY AT+FT A   A+   L+
Sbjct:   36 SNVLIKPRMVAR--GLEVSVCQCPKAMRRELKHVFT-GKTVTDDWIAIPTNQHSEMDLVNVGDDVEFEKDRCLNVFMDFGKAICEQLRSCGY-------WADYIDPCSGLPMLTPNCNKVYSEVDGMQMLMHYPIMNAAMCKILLHPKWGSAVYPATVFTDAPFSAISQLLK 197          
BLAST of Gvermi7990.t1 vs. uniprot
Match: UPI0014254C3A (methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X1 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014254C3A)

HSP 1 Score: 55.8 bits (133), Expect = 6.260e-6
Identity = 38/151 (25.17%), Postives = 64/151 (42.38%), Query Frame = 0
Query:   35 LQYSAHTAGSLLRRELHTIFPEAPRDAADLTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWARAVRDAL-HAGHAERDERPWVEAADPASGLAAWGRGT--GVYAEVDGAARLLGYATDAVGGCAVVRHPQWGLSVYLATMFTTARPD 182
            L+  A      L +    +FP+       +T++   Q+    + ++      E++  L+ F   A  +   L  AG        W +  DP+SG A  G         E D     LG+  + +G C  +RH  WG+ +++ T+FTTA PD
Sbjct:  137 LEMIAQDCPKSLIKGFSDLFPDIDLSKGSITILTLCQKTKNDMSTWSPEVEHEREELLENFMTSAVEICKLLTEAGF-------WADFIDPSSGQAFVGASNPNSTLFETDERFTKLGFDIEDLGCCKCIRHRDWGMHIFVGTLFTTAPPD 280          
The following BLAST results are available for this feature:
BLAST of Gvermi7990.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IQ40_9FLOR2.840e-4144.32Methylmalonic aciduria and homocystinuria type D p... [more]
A0A061SLZ4_9CHLO6.540e-2740.13Uncharacterized protein (Fragment) n=1 Tax=Tetrase... [more]
A0A4P9Y540_9FUNG9.720e-2743.67Uncharacterized protein n=1 Tax=Piptocephalis cyli... [more]
A0A1R1WYI8_9FUNG2.620e-1635.67Methylmalonic aciduria and homocystinuria type D-l... [more]
A0A1Y2CRG0_9FUNG1.600e-1537.50Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
A0A7S2FSY7_9STRA1.960e-1131.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
UPI0014254C3A6.260e-625.17methylmalonic aciduria and homocystinuria type D h... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019362Methylmalonic aciduria and homocystinuria type D proteinPFAMPF10229MMADHCcoord: 28..183
e-value: 7.9E-18
score: 65.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:534680..535352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7990.t1Gvermi7990.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 534680..535352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7990.t1 ID=Gvermi7990.t1|Name=Gvermi7990.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=195bp
MVPEDANQSVSQKRAQRIRAHTVVAPSMSERFDGLQYSAHTAGSLLRREL
HTIFPEAPRDAADLTVIVTMQRCDTPLMSFGAAQAAEKDRHLQRFFEWAR
AVRDALHAGHAERDERPWVEAADPASGLAAWGRGTGVYAEVDGAARLLGY
ATDAVGGCAVVRHPQWGLSVYLATMFTTARPDAVGSALQCVNHP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019362MMADHC