Gvermi7947.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi7947.t1 vs. uniprot
Match: A0A2V3IGM8_9FLOR (40S ribosomal protein S28 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGM8_9FLOR) HSP 1 Score: 125 bits (315), Expect = 1.760e-32 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
Query: 1 MDQPVKIAKVSKIIGRTGSRGGITQVRVEFLDDQNRSIIRNVKGPVREGDLLALLESEREARRFS 65
MDQPVK+AKVSKIIGRTGSRGGITQVRVEFLDDQNRSIIRNVKGPVREGDLLALLESEREARRFS
Sbjct: 43 MDQPVKLAKVSKIIGRTGSRGGITQVRVEFLDDQNRSIIRNVKGPVREGDLLALLESEREARRFS 107
BLAST of Gvermi7947.t1 vs. uniprot
Match: R7QI22_CHOCR (40S ribosomal protein S28 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI22_CHOCR) HSP 1 Score: 120 bits (301), Expect = 1.810e-31 Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0
Query: 1 MDQPVKIAKVSKIIGRTGSRGGITQVRVEFLDDQNRSIIRNVKGPVREGDLLALLESEREARRF 64
MDQPVK+ KVSKIIGRTGSRGGITQVRVEFLDD NRSIIRNVKGPVREGDLLALLESEREARRF
Sbjct: 1 MDQPVKLGKVSKIIGRTGSRGGITQVRVEFLDDANRSIIRNVKGPVREGDLLALLESEREARRF 64
BLAST of Gvermi7947.t1 vs. uniprot
Match: A0A3P6TB85_LITSI (Histone domain-containing protein n=2 Tax=Bilateria TaxID=33213 RepID=A0A3P6TB85_LITSI) HSP 1 Score: 120 bits (302), Expect = 1.970e-30 Identity = 73/140 (52.14%), Postives = 87/140 (62.14%), Query Frame = 0
Query: 131 VSCARPVHNPQQLSQNWRSQTSASDPSAQIARAKPQAMENTLKGRSAAPAPSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLR 270
V CA PV + Q R T P Q+A T R +APA G+KKP+R RPGTVALREI++YQ +T LL+ KL QRL REIAQDF+ +L F+ +AV ALQE+SEAYL GLFED NLCAIH R
Sbjct: 15 VLCADPVFLMARTKQTARKSTGGKAPRKQLA---------TKAARKSAPATG-----GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKR 140
BLAST of Gvermi7947.t1 vs. uniprot
Match: A0A453KP36_AEGTS (Histone domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453KP36_AEGTS) HSP 1 Score: 120 bits (302), Expect = 2.030e-30 Identity = 72/143 (50.35%), Postives = 95/143 (66.43%), Query Frame = 0
Query: 136 PVHNPQQLSQNWRSQTSASDPSAQIARAKPQAMENT--------LKGRSAAPAPSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLR 270
P H+ Q + + RS + + PS+ +AR K A ++T L ++A + G G+KKP+R RPGTVALREI+KYQ +T LL+ KL QRL REIAQDF+ +L F+ +AV ALQE++EAYL GLFED NLCAIH R
Sbjct: 1 PSHSTQTQTPHRRSTHTLTHPSSPMARTKQTARKSTGGKAPRKQLATKAARKSAPATG--GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKR 141
BLAST of Gvermi7947.t1 vs. uniprot
Match: A0A545A8F9_9PEZI (Histone domain-containing protein n=1 Tax=Golovinomyces magnicellulatus TaxID=62714 RepID=A0A545A8F9_9PEZI) HSP 1 Score: 121 bits (303), Expect = 5.260e-30 Identity = 74/151 (49.01%), Postives = 93/151 (61.59%), Query Frame = 0
Query: 122 PIRIRWSRIVSCARPVHN--PQQLSQNWRSQTSASDPSAQIARAKPQAMENTLKGRSAAPAPSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLR 270
P+ +R + V +RP H+ + Q R T P Q+A T R +APA G+KKP+R RPGTVALREI++YQ +T LL+ KL QRL REIAQDF+ +L F+ +AV ALQE+SEAYL GLFED NLCAIH R
Sbjct: 52 PLPLRGHQFVVVSRPEHSIAMARTKQTARKSTGGKAPRKQLA---------TKAARKSAPATG-----GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 188
BLAST of Gvermi7947.t1 vs. uniprot
Match: A0A091MHD1_9PASS (Histone H3 n=5 Tax=Amniota TaxID=32524 RepID=A0A091MHD1_9PASS) HSP 1 Score: 119 bits (297), Expect = 5.630e-30 Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0
Query: 180 APSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLR 270
APST G +KKP+R RPGTVALREI++YQ +T LL+PKL QRL REIAQDF+ +L F+ AA+ ALQE+SEAYL GLFED NLCAIH R
Sbjct: 30 APSTGG---VKKPHRYRPGTVALREIRRYQKSTELLIPKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKR 117
BLAST of Gvermi7947.t1 vs. uniprot
Match: UPI00174E2E6C (histone H3-like n=1 Tax=Bactrocera oleae TaxID=104688 RepID=UPI00174E2E6C) HSP 1 Score: 118 bits (295), Expect = 7.410e-30 Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 0
Query: 180 APSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLRE 271
AP+T G +KKP+R RPGTVALREI++YQ +T LL+ KL QRL REIAQDF+ +L F+ +AV ALQE+SEAYL GLFED NLCAIH LRE
Sbjct: 30 APATGG---VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHALRE 118
BLAST of Gvermi7947.t1 vs. uniprot
Match: A0A0A0LZM9_CUCSA (Histone domain-containing protein n=1 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LZM9_CUCSA) HSP 1 Score: 119 bits (298), Expect = 1.090e-29 Identity = 73/140 (52.14%), Postives = 92/140 (65.71%), Query Frame = 0
Query: 139 NPQQLSQNWRSQTSASDPSAQIARAKPQAMENT--------LKGRSAAPAPSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLR 270
N Q S N RS S+ +Q+AR K A ++T L ++A + G G+KKP+R RPGTVALREI+KYQ +T LL+ KL QRL REIAQDF+ +L F+ +AV ALQE++EAYL GLFED NLCAIH R
Sbjct: 15 NNNQTSSNPRSPKFPSESLSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATG--GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 152
BLAST of Gvermi7947.t1 vs. uniprot
Match: UPI0010A1D097 (histone H3.3A-like n=1 Tax=Peromyscus leucopus TaxID=10041 RepID=UPI0010A1D097) HSP 1 Score: 120 bits (300), Expect = 1.120e-29 Identity = 70/135 (51.85%), Postives = 84/135 (62.22%), Query Frame = 0
Query: 137 VHNPQQLSQNWRSQTSASDPSAQIARAKPQAMENTLKGRSAAPAPSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLRE 271
H Q R+ T P Q+A T R +AP+P G+KKP R RPGTVALREI++YQ +T LL+ KL QRL REIAQDF+ +L F+ AA+ ALQE+SEAYL GLFED NLCAIH RE
Sbjct: 70 AHTTAPTKQTARTSTGGKAPRKQLA---------TKAARKSAPSPG-----GVKKPRRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRE 190
BLAST of Gvermi7947.t1 vs. uniprot
Match: A3QQG9_9CHEL (Histone H3 (Fragment) n=4 Tax=Protostomia TaxID=33317 RepID=A3QQG9_9CHEL) HSP 1 Score: 117 bits (292), Expect = 1.410e-29 Identity = 61/91 (67.03%), Postives = 73/91 (80.22%), Query Frame = 0
Query: 180 APSTAGRAGMKKPNRTRPGTVALREIQKYQNNTALLVPKLLLQRLTREIAQDFREELGFREAAVRALQESSEAYLTGLFEDANLCAIHGLR 270
AP+T G +KKP+R RPGTVALREI++YQ +T LL+ KL QRL REIAQDF+ +LGF+ +AV ALQE+SEAYL GLFED NLCAIH R
Sbjct: 22 APATGG---VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLGFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 109 The following BLAST results are available for this feature:
BLAST of Gvermi7947.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi7947.t1 ID=Gvermi7947.t1|Name=Gvermi7947.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=275bpback to top |