Gvermi7664.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7664.t1
Unique NameGvermi7664.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length249
Homology
BLAST of Gvermi7664.t1 vs. uniprot
Match: R7Q637_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q637_CHOCR)

HSP 1 Score: 126 bits (317), Expect = 8.950e-32
Identity = 68/200 (34.00%), Postives = 115/200 (57.50%), Query Frame = 0
Query:   46 VPLVRQQQEEAVFAVNSSSAGFARTSQAGLTVQRGTSGVLTFSFNINAIEAETLATLDQQFSSSLTVSEMEEYSRLRSDYRSGFGVPFLRWLGINLNNRRVTREDMQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVPSSGGDIDII 245
            +P    + E + F   SS +G  R ++ GL V RG  G L F   + AI+AETL   D++F ++L+ +E   Y   ++ ++ G  +P  +W+G + + ++VT E        +ENY  +   A Q+L N    +++ISG L A G SF PT  FAFI++AR+  +DG++  +VS + +++VA  +GG+ +PS    +D+I
Sbjct:   57 IPATVTRDEFSDFTSYSSESGVGRITRVGLNVNRGAYGTLYFDIVVKAIDAETLQKNDKEFEATLSAAEKSVYRTRKASWKKGLDIPLFKWIGADFD-KKVTTESFTEEAASQENYTEKVRAASQLLENSASTKIRISGSLKATGISFRPTVAFAFIKLARVTFEDGSSQLIVSNNPEDVVAGTSGGDVLPSEDPVVDVI 255          
BLAST of Gvermi7664.t1 vs. uniprot
Match: A0A2V3IGH3_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH3_9FLOR)

HSP 1 Score: 116 bits (290), Expect = 5.900e-28
Identity = 72/195 (36.92%), Postives = 108/195 (55.38%), Query Frame = 0
Query:   51 QQQEEAVFAVNSSSAGFARTSQAGLTVQRGTSGVLTFSFNINAIEAETLATLDQQFSSSLTVSEMEEYSRLRSDYRSGFGVPFLRWLGINLNNRRVTREDMQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVPSSGGDIDII 245
            + +   ++ + +S +G  RT  AG+TVQRGTSG L+FS  +  + A+ LA +D +F  SL+ ++   Y   R  Y    GVPFLR++G +L  + VT  DMQ     + NY + +  A +IL   + + L+ISG  T  GTSFIP T   FI++A++   DGT   VVS   D ++      N V  +G D  I+
Sbjct:   50 RDESGVIYPLLNSISGAIRTIGAGITVQRGTSGTLSFSVTLQGVRADELADMDAEFIDSLSFADRSAYELERRSYTGDLGVPFLRFVGADLR-KNVTECDMQLVRVTQPNYESNARAANKILQESEIKTLRISGRRTITGTSFIPRTALVFIQVAQVTLPDGTCKRVVSNRDDAVIVGSTN-NRVIDTGADEFIV 242          
BLAST of Gvermi7664.t1 vs. uniprot
Match: A0A2V3IL72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL72_9FLOR)

HSP 1 Score: 82.0 bits (201), Expect = 5.420e-15
Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = 0
Query:   67 FARTSQAGLTVQRGTSGVLTFSFNINAIEAETLATLDQQFSSSLTVSEMEEYSRLRSDYRSGFGVPFLRWLGINLNNRRVTREDMQRSFEMRENYNTQSTIA-QQILSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVP 236
            F    QA L V+ G     +F++ I+ + +  LA  D  F+S++   E   Y   +  Y  G  +PFLR LGI+LN        +  +   R++Y     IA +QI+ + +  +L+I+G ++  G S  P+T   F++ +R+   D T L VVS + D++VA D   N +P
Sbjct:   63 FGPIGQATLNVRLGLRASFSFNYRIDGVTSAYLAASDHIFTSTMNSRERILYEEAKRGYNGGLDIPFLRQLGIHLNE----SHSLDANLVSRDDYYALKAIAARQIMQSFRGGKLRINGTISVIGVSEQPSTARVFVKFSRVTLVDNTVLHVVSSNNDDVVAGDDSHNMLP 229          
BLAST of Gvermi7664.t1 vs. uniprot
Match: R7Q4Y7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y7_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 4.830e-11
Identity = 36/100 (36.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:  146 VTREDMQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVPSSGGDIDII 245
            +++E++    E  E +  +      IL  V   +++I+G LTA G S IPT  FAF+R+AR++ +DG+T  VVS   ++++AAD  G+ V +S  + DI+
Sbjct:   13 LSKEELVEKRESSEEFRKREQALTSILETVADTRIRINGTLTATGVSQIPTVAFAFVRLARIEFEDGSTQLVVSNKNEDIIAADEDGDAVGTSDQESDIL 112          
The following BLAST results are available for this feature:
BLAST of Gvermi7664.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7Q637_CHOCR8.950e-3234.00Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A2V3IGH3_9FLOR5.900e-2836.92Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IL72_9FLOR5.420e-1530.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4Y7_CHOCR4.830e-1136.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1599375..1600121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7664.t1Gvermi7664.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1599375..1600121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7664.t1 ID=Gvermi7664.t1|Name=Gvermi7664.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=249bp
MTTPKIFTTVFALSLLTLVSSSAVPGLPENVMDLPIIDIQESTLVVPLVR
QQQEEAVFAVNSSSAGFARTSQAGLTVQRGTSGVLTFSFNINAIEAETLA
TLDQQFSSSLTVSEMEEYSRLRSDYRSGFGVPFLRWLGINLNNRRVTRED
MQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFA
FIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVPSSGGDIDIIPLF*
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