Gvermi6971.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6971.t1
Unique NameGvermi6971.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length326
Homology
BLAST of Gvermi6971.t1 vs. uniprot
Match: A0A2V3J4H4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4H4_9FLOR)

HSP 1 Score: 317 bits (811), Expect = 5.790e-105
Identity = 157/262 (59.92%), Postives = 198/262 (75.57%), Query Frame = 0
Query:   66 SQLDKVDAEKTTPQLPSKSVS----IKIERFITGAAYAGFVLFALFLAPGSLSNTGEIGRIVGGKLDDVNELFFALFCLMGTLSINMAVLLNPGAGAQKRLSTGWFSFAGVFLGFGALGPYLIGREYAPSVYSQDISKRGLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLYASFKSLGRLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRRGWFVSGKKLESILTALSILSTPGVGVALYLILRPRLPR 323
            S+ D++  E ++   PSKS S    I++ER  TG A A F ++ L LAPGSL++ GEIGRI+ G+LD+VN+LFFA+F L+G +S N AVLLNPGA  QK LSTG FSF GVF GFGALGPYL  REY PSV S++++ +G+  R++ES+ FSVG L++ LW YAFALG FTPGT  +HDA+ YA+  +L RL  TDRF  V+ +D + LS+ TWGPLTEDMRRRGWF  G+  ES LTALSI STPG+GVALYLI+RPRLP+
Sbjct:    4 SRTDEMKTETSSTSTPSKSTSPVPSIRVERVATGVAAAVFAIYGLVLAPGSLTDLGEIGRILSGRLDEVNDLFFAIFNLLGAVSFNFAVLLNPGASRQKLLSTGLFSFLGVFFGFGALGPYLAAREYVPSVSSEEVAAQGITSRVLESRAFSVGLLVYVLWIYAFALGVFTPGTENLHDAIFYAAGVNLFRLFSTDRFASVSVVDLVCLSLATWGPLTEDMRRRGWFAEGRLSESYLTALSIASTPGLGVALYLIMRPRLPK 265          
BLAST of Gvermi6971.t1 vs. uniprot
Match: S0F3N9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3N9_CHOCR)

HSP 1 Score: 212 bits (540), Expect = 8.440e-65
Identity = 103/201 (51.24%), Postives = 138/201 (68.66%), Query Frame = 0
Query:  122 IVGGKLDDVNELFFALFCLMGTLSINMAVLLNPGAGAQKRLSTGWFSFAGVFLGFGALGPYLIGREYAPSVYSQDISKRGLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLYASFKSLGRLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRRGWFVSGKKLESILTALSILSTPGVGVALYLILRPRLP 322
            I+ GKL+DVN++FFA+F L G  S+ +A LLN GA  QK+L T  FS AG+FLGF + GPYL GREY P +  +++  RG+  R +ESK  ++ T+ + LW YAFALG FTPGT + HD +LYA+   L R    DR +  T +D ++L+ +  GPLTEDM RRGWF  G+ ++SILTAL  L  P +G A+YL+LRP LP
Sbjct:    2 IISGKLEDVNDVFFAIFNLFGATSVTLAALLNAGASRQKKLRTDLFSIAGLFLGFWSFGPYLFGREYVPKIAREEVYDRGILSRALESKALALATVGYALWAYAFALGFFTPGTLKYHDVLLYATVVDLFRDFSMDRGIFSTCIDFVILNTVIGGPLTEDMSRRGWFREGRNIDSILTALCFLLIPVLGPAVYLLLRPSLP 202          
BLAST of Gvermi6971.t1 vs. uniprot
Match: A0A836CEA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA7_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.020e-15
Identity = 73/232 (31.47%), Postives = 108/232 (46.55%), Query Frame = 0
Query:   96 AAYAGFVLFALFLAPGSL-SNTGEIGRIVGGKLD-----DVNELFFALFCLMGTLSINMAVLLNPGAGAQKRLSTGWFSFAGVFLGFGALGPYLIGREYAPSVYSQDISKRGLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLYASFKSLGRLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRRGWFVSGKKLESILTALSILSTPGVGVALYLILRPRL 321
            A +   V +A   APG        + ++    +      D+N+L+  +F  +G +    A LL PG+  Q RL    F  A    G+  L PYL  R+Y P V   +   RGL        G  V TL+F L    FA+      T  +     + SF+    L  +   V V+++D LLLSV+ W P+ EDMRRRG +  G +  +I  A +  + P +G A+YL +RP L
Sbjct:   51 AIWTALVAYAFLYAPGHTPEGDAAVTQMTAALMTNPFSPDINQLYVVIFNALGVVPAIYAQLLLPGSKGQ-RLPAAPFVLASFAGGYFLLAPYLALRQYRPCV--DEAQLRGLATLSTLRLG-GVLTLVFALGLLQFAI------TNHV-----WTSFEEYMLLFRSQTLVHVSSIDLLLLSVVVWEPMLEDMRRRGMYTDGSRSANIRLA-AFCAIPVLGPAVYLAVRPPL 266          
BLAST of Gvermi6971.t1 vs. uniprot
Match: A0A1X6NZZ1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZZ1_PORUM)

HSP 1 Score: 78.6 bits (192), Expect = 3.230e-13
Identity = 80/266 (30.08%), Postives = 117/266 (43.98%), Query Frame = 0
Query:   68 LDKVDAEKTTPQLPSKSVSIKIERFITGAAYAGFVLFALFLAPGSLSNTGEIGRIVGGKLDDVNELFFALFCLMGTLSINMAVLLNPGAGAQKRLSTGWFSFAGVFLGFGA---LGPYLIGREYAPSVYSQDISKRGLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLYASFKSLG-----RLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRRGWFVSGKKLESILTALSILSTPGVGVALYLILRPRLPRKK 325
            +D V A++      S+  +      +   A+ G +L    LAP   +    + +   G     + L  AL+ L   L    A+LL PG+  Q RL T W  F GV L  G    LGPYL  R Y P+V   ++   G   R+ E + FS   L                G   I    +  SF  +G      LL+ D +     +D L L V  WGPL EDMRRRG + +    +++L A  ++  P +GV LY +LRP+L  ++
Sbjct:   14 VDGVPADELAASPSSRLRNTSARAVVVATAWVGLLLSVSALAPPGCALAPVLTQ---GPGLGAHPLAAALWGLRACLVAAAAILLTPGSRDQ-RLPT-WV-FLGVSLAGGGGFVLGPYLALRRYRPAVGRSEL---GAMARMSEGRMFSSLFL----------------GLAAIAVIGVAVSFGGVGLGGARALLMEDAWTWAAAVDVLYLWVALWGPLCEDMRRRGLYEASSFADNLLAAGVVVGGP-LGVLLYGVLRPKLEDRR 253          
BLAST of Gvermi6971.t1 vs. uniprot
Match: A0A7S3T492_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T492_9SPIT)

HSP 1 Score: 79.0 bits (193), Expect = 4.720e-13
Identity = 62/198 (31.31%), Postives = 90/198 (45.45%), Query Frame = 0
Query:  130 VNELFFALFCLMGTLSINMAVLLNPGAGAQKRLSTGWFSFAGVFLGFGALGPYLIGREYAPSVYSQDISKRGLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLYASFKSLGRLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRRGWFVSGKKLES---ILTALSILSTPGVGVALYLILRPRLPRK 324
            +  +FF +F  +G +    A  L PGA  Q  L    F  A  F G+GA GPYL  R+  P       S  G   R +       GT++ T       L A      E  DA +    K       + + V V++ D L+LS   + P  EDM+RRGW+ +  +  +   IL   S  + P +G ALY++LRP LP++
Sbjct:  122 IPSIFFVVFNSLGIMPALYAATLLPGAKNQSPLPAAPFLAAAFFAGYGATGPYLALRQ--PRTEPVACSDLGFIARTITESRLFGGTMVLTSLLLLSKLLAI-----EDWDAAISVYRKLFD----SSQLVNVSSFDLLVLSAFFFEPAREDMQRRGWYAAPSEQPTTIEILRLASFCAVPVLGPALYVLLRPSLPKE 308          
BLAST of Gvermi6971.t1 vs. uniprot
Match: A0A7R9YKT6_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YKT6_DIALT)

HSP 1 Score: 60.1 bits (144), Expect = 6.750e-7
Identity = 59/213 (27.70%), Postives = 93/213 (43.66%), Query Frame = 0
Query:   81 PSKSVSIKIERFITGAAYAGFVLFALFLAPGSLSNTGEIGRIVG------GKLD-DVNELFFALFCLMGTLSINMAVLLNPGAGAQKRLSTGWFSFAGVFLGFGALGPYLIGREYAPSVYSQDISKRGLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLY-ASFKSLGRLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRR 285
            P+ + ++++   ++  A+   V F   LAPG + +  +   +V         +D  V+ LF  LF L   +   +A LL P +  Q+  +   F  A  F+GF ALGPYL+ R     + + D      F    E++ F V           FAL    P + +I     + A+     RLL + R V V++ D  LL V     + ED RRR
Sbjct:   32 PTSASALQLASVLSALAWVALVGFGFGLAPGRVGDPSDTELVVALASNPTSPMDAGVSPLFALLFNLFVPVPAMLAALLLPTSRGQRAPALP-FVAASAFVGFFALGPYLVLRSPPAPLTAADEPPFAFF----ETRAFGVAV---------FALTLSIPLSAQIFQIADWPAAVDEFARLLQSSRLVSVSSADMTLLVVTLALLVREDARRR 230          
BLAST of Gvermi6971.t1 vs. uniprot
Match: A0A7T5E0T5_9CYAN (DUF2834 domain-containing protein n=2 Tax=Leptolyngbya sp. BL0902 TaxID=1115757 RepID=A0A7T5E0T5_9CYAN)

HSP 1 Score: 57.0 bits (136), Expect = 5.860e-6
Identity = 67/224 (29.91%), Postives = 95/224 (42.41%), Query Frame = 0
Query:  106 LFLAPGSLSNTGE-IGRIVGGKLDDVNELFFALFCLMGTLS-INMAVLLNPGAGAQKRLSTGWFSFAGVFLGFGALGPYLIGREYAPSVYSQDISKRGLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLYASFKSLGRLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRRG----WFVSGKKLESILTALSILSTPGVGVALYLILRPRLPR 323
            + LAP    +  + I R+  G  D +N    ALF  MG    +  AV L  G G  +R+    F  A   +G  AL PYL  R   P V  +D   R +  RL+ +   ++  L+   W                   ++Y  + +  +   T RFV V TLD   L +L    L +D+ RRG    W +            S+L+ P +G ALYL LRP LPR
Sbjct:    1 MLLAPPDQPDIADLILRLSTGNWDGLNPALIALFNAMGLWPMVYAAVALVDGRG--QRIWAWPFVGASFAVGAFALLPYLALRSPVPWVGPEDRLLRVVGSRLLGAS-LALAALVLLGW------------------GLIYGDWSAFWQQWQTSRFVHVMTLDFCALWLLFPVLLIDDLPRRGLRQGWVIP-----------SVLALPLLGAALYLALRPPLPR 192          
The following BLAST results are available for this feature:
BLAST of Gvermi6971.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J4H4_9FLOR5.790e-10559.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
S0F3N9_CHOCR8.440e-6551.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A836CEA7_9STRA1.020e-1531.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1X6NZZ1_PORUM3.230e-1330.08Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3T492_9SPIT4.720e-1331.31Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A7R9YKT6_DIALT6.750e-727.70Hypothetical protein (Fragment) n=2 Tax=Diacronema... [more]
A0A7T5E0T5_9CYAN5.860e-629.91DUF2834 domain-containing protein n=2 Tax=Leptolyn... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36009FAMILY NOT NAMEDcoord: 90..323
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 253..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 318..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..232
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..317
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 233..252
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..295
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 254..276
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
NoneNo IPR availableTMHMMTMhelixcoord: 296..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:782835..783812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6971.t1Gvermi6971.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 782835..783812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6971.t1 ID=Gvermi6971.t1|Name=Gvermi6971.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=326bp
MVATSAAGHGSQWCMTTVTPGFAQPLRVSRVLPSQKGLFSGVCVLKQNTY
QASDLRRLKPKIIAASQLDKVDAEKTTPQLPSKSVSIKIERFITGAAYAG
FVLFALFLAPGSLSNTGEIGRIVGGKLDDVNELFFALFCLMGTLSINMAV
LLNPGAGAQKRLSTGWFSFAGVFLGFGALGPYLIGREYAPSVYSQDISKR
GLFGRLVESKGFSVGTLLFTLWTYAFALGAFTPGTTEIHDAVLYASFKSL
GRLLLTDRFVCVTTLDGLLLSVLTWGPLTEDMRRRGWFVSGKKLESILTA
LSILSTPGVGVALYLILRPRLPRKK*
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