Gvermi6937.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6937.t1
Unique NameGvermi6937.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length565
Homology
BLAST of Gvermi6937.t1 vs. uniprot
Match: A0A2V3INM3_9FLOR (DNA polymerase iota n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM3_9FLOR)

HSP 1 Score: 689 bits (1778), Expect = 2.010e-243
Identity = 356/565 (63.01%), Postives = 426/565 (75.40%), Query Frame = 0
Query:    5 KKRLRSASTRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAWLVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAPFLFKGHVFGMTEDDEVRRILMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSPRALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVSYRFRGDGFVATSRSVPMPMEIVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGITEDISKFFCKPKKSWASTHRRQS----HIHPADGCSPEVSPLICPSSRREVQKGKAGHNSDLFGVAICPICSKQISGDNLRQNNHIDHCLKAA--NSDFSSSRSTRDGKKSKTRTVDSYFAKR 563
            +KR R  ++RAIIA DLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVS ALQ CPELVCIDGSDLTPFREASLEV+TAIRAWL +RA + +A    + P CACQRLGFDEVFIDVT L  ++IE GGAPFLF+GHVFG T+DDE+RR+LMVASQ++H LR+++  +T+LT+CAG+S+SKQLAKLAVNMNKPNDQT FLP  + EY+ TLSPRAL GFGH TH+KII W K + K   +ETV DVL LFG G+ G+ +L  I+GNE  A  IL++ RG+D TEV+D G+APKS+SAEDSC+SC  M+DV+RRL VQ++RLVSRLRSDG LFSRRP+ L+VSYRFRGDGFV TSRSVPMP EIVSVC SQ   A+PKAIE++++ AL+VL  HA V     FDLTLL+VGASNF+ + +  GNG+T DIS+FF    K   S  ++ S    H     G S              VQ+  +   S       CPIC+ ++SGDNL QNNHID CLK++    D S+    R  K   TRT+DSYF+KR
Sbjct:    5 RKRQRPVTSRAIIAFDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSHALQKCPELVCIDGSDLTPFREASLEVVTAIRAWLADRAREAAAMSNTKPPFCACQRLGFDEVFIDVTELALSEIENGGAPFLFRGHVFGRTDDDELRRLLMVASQLSHQLREYLIAKTQLTLCAGISHSKQLAKLAVNMNKPNDQTVFLPDQSAEYLKTLSPRALQGFGHGTHDKIITWTKHNGKHEGIETVADVLQLFGDGQDGIRRLGTILGNEQHALHILNLCRGVDHTEVLDSGDAPKSISAEDSCRSCTTMEDVSRRLVVQITRLVSRLRSDGQLFSRRPRALSVSYRFRGDGFVGTSRSVPMPTEIVSVCCSQQNKAIPKAIESIKKTALSVLKEHAGVQEGRTFDLTLLAVGASNFSDSDSFKGNGLTTDISEFFIGKAKRIDSGKKKSSGTLHHSQTPTGVS------------NHVQRTDSKERSTPEAEVRCPICNSKLSGDNLMQNNHIDKCLKSSCTKRDKSAGSVKRARKSLGTRTLDSYFSKR 557          
BLAST of Gvermi6937.t1 vs. uniprot
Match: R7QGB3_CHOCR (DNA Polymerase Iota n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGB3_CHOCR)

HSP 1 Score: 511 bits (1315), Expect = 1.660e-173
Identity = 277/569 (48.68%), Postives = 380/569 (66.78%), Query Frame = 0
Query:    1 MRPGKKRLRSASTRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAWLVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAPFLFKGHVFGMTEDDEVRRILMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSPRALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVSYRFRGDGFVATSRSVPMPMEIVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGIT--EDISKFFCKPKKSWASTHRRQSHIHPADGCSPEVSPLI----CPSSRREVQKGKAGHNSDLFGVAICPICSKQISGDNLRQNNHIDHCLKAANSDFSSSRSTRDGKKSKTRTVDSYFAKR 563
            M   +KR R++ +RAI+ALDLDCFYA VAIR+RPHL ++PVVI+QKHLCVTSNYVAR  A GAVQKMTPVS AL+ CP++VCIDGSDLTPFREA+ EV+  IRAWL  +  ++       +    CQ+LGFDEVFIDV+ L   Q+  GG P+ F+GH+FG T+DD  RR LMVASQ+A +LR  +T RT+LT+CAG+S SK LAKLAVNMNKPNDQT FL G+A +YIA   PR+L GFG++   KI AWAK++ K+  ++T  DV+  FG G+ G   LA ++ N++QAR+IL++ +G DT+ V++ G+APKS+++ DS +SC  ++D  RR+T++   +V+RLR D  L+ RRPKTLTV +RFRGDG+ AT R++PMP EIVS+C S+  +A  ++I A+ R AL VL  HA V A + FD+TL+S+GAS FT  K E     T  E ++ FF  PK+      +  S +     C P    L+     P+ RR +    +         + CPIC++ +S    + + H+D CL+   S+  S    R    S T  VD++F ++
Sbjct:    1 MSAARKRPRASQSRAILALDLDCFYAQVAIRSRPHLANRPVVILQKHLCVTSNYVARRLAHGAVQKMTPVSTALKACPDIVCIDGSDLTPFREANAEVLAVIRAWLHAKVTELGVG----SFPIPCQKLGFDEVFIDVSRLVAEQVTAGGRPWEFQGHIFGRTDDDASRRALMVASQLASELRKEITLRTKLTLCAGISESKLLAKLAVNMNKPNDQTIFLSGDAAQYIAGRHPRSLPGFGYAVEGKISAWAKRNGKED-IKTAADVVQWFGDGKKGFASLAKVLDNDDQARKILELCQGTDTSPVIESGDAPKSLTSMDSFRSCTKIEDAERRVTIRAKDMVTRLRRDWELYGRRPKTLTVGFRFRGDGYHATMRAIPMPQEIVSLCSSKGADAADRSIIALSRAALFVLKDHAGVSASSTFDMTLISIGASAFTENKTEKNATSTKKETVASFFA-PKEG-----KGMSSV-----CRPPNGRLLQNRSSPNPRRPLSPNAS--------FSRCPICNEVLSSLLAKASLHVDQCLRR--SETVSPARKRSKTASNTFRVDTFFQRK 543          
BLAST of Gvermi6937.t1 vs. uniprot
Match: A0A7S3ENM2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENM2_9RHOD)

HSP 1 Score: 204 bits (520), Expect = 8.140e-56
Identity = 156/453 (34.44%), Postives = 223/453 (49.23%), Query Frame = 0
Query:   11 ASTRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAWLVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAPFLFKGHVF---------GMTEDDEVRRILMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSPRALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLN--KLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLF-SRRPKTLTVSYRFRGDGFVATSRSVPMP-MEIVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGITEDI 450
            A+ R +IA+DLDCFYA V I A+P L++KPV + Q+H+ VT NY+AR   K   +K+   + A++ CPEL+ I+G DLT +R A+  V  A+R                       ++LG DE FID T++    I+     + F+G V+            ED E  R LMV SQ+A  LR  + + +ELT CAGV+++K LAKLA NMNKPN QT+ +PG A  Y++ L  R L G G         W   H  +   +  GD +   G  R   N  +L +++G++ +A  + D++RG D TEV +   A K +S EDS +S     +V          L  RL+ D  L   RR  TL V +R         SRS P P +E+ ++  S         I  ++   +A             F LTLL VGA NF +   + G G   D 
Sbjct:   44 ATDRVVIAIDLDCFYAQVEIVAKPELREKPVAVTQQHIIVTCNYIAR---KFGCRKLMSTADAVKSCPELILINGEDLTRYRAANELVHQAVRGVC--------------GLNTRIEKLGLDEFFIDATHIVNETIKSKSYNYNFEGFVYPAMDQLFEGSNAEDVETERALMVGSQLASRLRAKILEDSELTCCAGVASNKMLAKLAANMNKPNSQTSLMPGVAGSYVSDLPLRKLPGVG---------WKASHEFR---QIFGDEVKTAGHLRSAYNLPQLENLLGSK-RAAWLWDLARGEDRTEVKNT-IATKIVSVEDSFKSAKTWGEVQDLTLKLCGELKDRLKIDAELHPGRRASTLRVVFRKAKRN--RESRSTPFPDLEVDALQHSM--------IHVLKASGIA-----------EPFHLTLLGVGACNFVNLVPQPGTGRLIDF 444          
BLAST of Gvermi6937.t1 vs. uniprot
Match: A0A3Q2Q976_FUNHE (DNA polymerase iota n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2Q976_FUNHE)

HSP 1 Score: 202 bits (513), Expect = 3.880e-53
Identity = 171/510 (33.53%), Postives = 241/510 (47.25%), Query Frame = 0
Query:   14 RAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAW--LVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAP--FLFKGHVFG-MTEDDEVRRI--LMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSP-RALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVS---YRFRGDGFVATSRSVPMPMEIVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTST-KAENGNGITEDISKFFCKPKKSW-ASTHRRQSHIHPADGC--SPEVSPL--ICPSSRREVQKGKAGHNSDLFG 506
            R I+  DLDCFYA V +   P L+D P+ I QK++ VT NYVAR R    V K+  V+ A + CPELV + G DLT +RE S +V   + ++  LVER                   LGFDE F+DVT + E ++ R   P  F FKGHVF  ++ D +  R   L + S IA +LR+ +  +  LT CAGV+ +K LAKL     KPN QT  L  N  + +  LS  R + G GH T  ++ A      K   V  V D+   FG                  A+R+ +++ GID + V   G AP+S+S EDS +   ++++V  ++   +S LV R+ +DG    R+P+T  ++   Y      F   SR  P+P  +      Q + +      A   V LA+   H  V     F LTL++V  SN  S   A +G G           P+KS  +S+  R S    ADGC    +VS    I P   +   KG       L G
Sbjct:   47 RVILHFDLDCFYAQVEMIRNPALRDVPLGIQQKYIIVTCNYVARERG---VTKLMSVTDAKEKCPELVLVKGEDLTHYREMSYKVTEVLMSYCPLVER-------------------LGFDENFVDVTEMVEQRLARTSEPNSFSFKGHVFNHLSADAKASRHPRLAMGSHIAAELREAIHSKLGLTGCAGVATNKLLAKLVSGTFKPNQQTVLLQENIGDIMGCLSGLRKVPGVGHQTARRLQALGLVSVKDLQVYPVNDLSREFGGPT---------------AQRLKNLALGIDESAVTPTG-APQSLSDEDSFKKMCSVKEVVEKIQELLSSLVGRMHTDG----RQPQTFRLTIRRYSATNKWFSRESRQCPIPGSV-----GQKIISGSPEDAASLLVPLAMKLFHKMVECGAAFHLTLINVCFSNLQSRGPAVSGKGAITSFFTQSASPRKSQISSSQNRDSSTQNADGCLLGRQVSACSRIAPPKGQVTSKGACSSEEPLHG 509          
BLAST of Gvermi6937.t1 vs. uniprot
Match: UPI00190131BA (DNA polymerase iota isoform X4 n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI00190131BA)

HSP 1 Score: 195 bits (496), Expect = 4.040e-52
Identity = 156/503 (31.01%), Postives = 243/503 (48.31%), Query Frame = 0
Query:   14 RAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAW--LVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERG--GAPFLFKGHVFGMTEDDE---VRRILMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSP-RALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVS---YRFRGDGFVATSRSVPMPMEIVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGITEDISKFFCKPKKSWASTHRRQSHIHPADGCSPEVSPLICPSSRREVQKGKAGHNSDLF 505
            R I+  DLDCFYA V +   P L++ P+ I QK++ VT NYVAR      V K+  V+ A + CP+LV + G DLT +RE S +V   + ++  LVER                   LGFDE F+D+T + E +IE+    A + ++GHV+ +   D    V   L V S+IA +LR  +  +  LT CAG++ SK LAKL     KPN QTT LP + ++ + +L+  R + G GH T +++ A      +   +  + D++  FG                + A+R+ +++ GID T V   G AP+S+S EDS +  ++  +V +++   +S ++ R+  DG    R+P TL ++   Y      F   SR  P+P  I     S + +A+ +       V++A+   H  V     F LTLL+V  SN  +  A    G    I+ FF         THR       +  C  ++S  +  + R +V       NS L 
Sbjct:   45 RVILHFDLDCFYAQVEMIRNPALRNVPLGIQQKYIIVTCNYVARDLG---VTKLMLVTDAKEKCPQLVLVKGEDLTHYRETSYKVTELLMSFCPLVER-------------------LGFDENFMDITEMVERRIEQNPESAHYSYEGHVYNLDTSDAKVMVHPRLAVGSRIAAELRAEIHSKLGLTGCAGIATSKLLAKLVSGAFKPNQQTTLLPESVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVSVQDLQLFPLADLVREFGV---------------STAQRLQNLALGIDDTPVTPTG-APQSLSDEDSFKKMSSTNEVWQKVKDLLSSILDRMHKDG----RQPLTLRLTIRRYSATNKWFSRESRQCPIPNHIGQKITSGNCDALAQL------VSMAMKLFHKMVDTNTAFHLTLLNVCFSNLQAKCAAVSKG---SIASFF---------THRSPEKTQASSRCQEDLSQSVLGNLRGQVGSDVEAGNSSLI 487          
BLAST of Gvermi6937.t1 vs. uniprot
Match: A0A672T306_SINGR (DNA polymerase iota n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672T306_SINGR)

HSP 1 Score: 194 bits (493), Expect = 1.430e-51
Identity = 158/504 (31.35%), Postives = 242/504 (48.02%), Query Frame = 0
Query:    7 RLRSASTRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAW--LVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAPFL-FKGHVF---GMTEDDEVRRILMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSPRALM-GFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVS---YRFRGDGFVATSRSVPMPME--IVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGITEDISKFF---CKPKKSWASTHRRQSHIHPADGCSPEVSPLICPSSRREVQK 495
            R+ S S R I+ +DLDCFYA V +   P L++KP+ I QK+L VT NYVAR      V K+  V+ A++ CP+LV + G DLT +RE S +V   + ++  LVER                   LGFDE F+DVT + E +++      L F GHV+    M  D+E  R L V S IA ++R  +     LT CAG++N+K LAKL     KPN QTT LP +  E +++L+    + G G+ T EK+ A      +   + ++ D++  FG               E  A+RI +++ GID + V   G  P+S+S EDS +  + +++V ++    ++ L  R+  DG    RRP T  ++   Y      F   SR  P+P    +   C S +  AVP+ +       L++   H  +  +  F LTLL+V  SN  +  +   +     I+ FF   C       S  +   +  P       V P +      +VQ+
Sbjct:   29 RVTSISQRVILHIDLDCFYAQVEMIRNPALRNKPLGIQQKYLIVTCNYVAREHG---VNKLMSVTDAVEKCPQLVLVKGEDLTHYREMSYKVTELLMSYCPLVER-------------------LGFDENFMDVTEMVERRLKETCISDLSFNGHVYKHESMAVDEENAR-LAVGSVIAAEMRQAIFSTLGLTGCAGIANNKLLAKLVAGTFKPNQQTTLLPYSTAELMSSLTGLIKVPGIGYKTREKLKALGLVSVRDLQLYSLADLVREFG---------------EVTAKRIQNLACGIDDSPVTPAG-PPQSLSDEDSFKKISTLEEVQKKTEELLTSLTERMHKDG----RRPHTFRLTIRQYTVTNRWFSRESRQCPIPNHTGLKITCGSSE--AVPQLL------GLSMKLFHKMLDTREPFHLTLLNVCFSNLQAKSSSKSS-----IASFFTQKCPTTTQMTSQQQVSMYDFPYFNVPANVDPYVFSQLPADVQR 476          
BLAST of Gvermi6937.t1 vs. uniprot
Match: UPI0019546923 (DNA polymerase iota isoform X3 n=1 Tax=Oreochromis aureus TaxID=47969 RepID=UPI0019546923)

HSP 1 Score: 192 bits (489), Expect = 1.700e-51
Identity = 154/473 (32.56%), Postives = 232/473 (49.05%), Query Frame = 0
Query:   14 RAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAW--LVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGA--PFLFKGHVFGMTEDDEVRRI---LMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATL-SPRALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVS---YRFRGDGFVATSRSVPMPMEI-VSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNF-TSTKAENGNGITEDISKFFCK---PKKSWASTHRRQSH 470
            R I+  DLDCFYA V +   P L++ P+ I QK++ VT NYVAR R    V K+  V+ A + CPELV + G DLT +RE S ++   + ++  LVER                   LGFDE F+DVT + E ++ +      F +KGHV+     D        L + S IA +LR+ V  +  LT CAG++ +K LAKL     KPN QTT LP N  + +  L S R + G GH T +++ A      K   +  + D++  FGS                 A+R+ +++ G+D + V  C  AP+S+S EDS +  ++ ++V+ +    +S LV R+  DG    R+P+T  ++   Y      F   SR  P+P  I   +C     +AV + +    ++   ++D+ A       F LTL++V  SN  T   A  G G    I+ FF +   PKKS     + Q H
Sbjct:   44 RVILHFDLDCFYAQVEMIRNPALREVPLGIQQKYIIVTCNYVARERG---VNKLMSVTDAKEKCPELVLVKGEDLTHYREMSYKMTELLMSYCPLVER-------------------LGFDENFMDVTEMVEQRLAQTVKFEDFSYKGHVYNHPSADVKASKYPRLALGSHIAGELREAVHSKLGLTGCAGIATNKLLAKLVSGTFKPNQQTTLLPENISDIMGCLGSVRKVPGVGHQTAKRLQALGLVSVKDLQLCPLNDLVKEFGSPT---------------AQRLKNLALGVDDSPVT-CTGAPQSLSDEDSFKKMSSTKEVSEKTQQLLSSLVERMHKDG----RQPQTFRLTIRKYTTTNKWFSRESRQCPIPNHIGQKICSGSSDDAVMQLLPLAMKLFYRMVDYSA------PFHLTLINVCFSNLQTRAAAVTGKG---SITSFFSRGTSPKKSQTVLSQCQHH 465          
BLAST of Gvermi6937.t1 vs. uniprot
Match: UPI0018D9001A (DNA polymerase iota-like isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9001A)

HSP 1 Score: 199 bits (505), Expect = 2.080e-51
Identity = 162/495 (32.73%), Postives = 239/495 (48.28%), Query Frame = 0
Query:   13 TRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAWLVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAPFLFKGHVFGMTEDDEVRRI---------------LMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSP-RALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFG-SGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVSYR--FRGDGFVATSRSVPMPMEIVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGITEDISKFFCK---PKKSWASTHRR-------QSHIHPADGCS 478
            TR II +DLDC+YA V +   P L+ KP+ I QK+L VT NYVAR+R    V K+  ++ ALQ CP+LV ++G DLT +RE S                +++  LQ  +P    +RLGFDE FIDV++L   +++R        GHV+G T  + V  I               L++AS IAH++R+ +  +  LT CAGV+++K LAKL  + +KPNDQTT  P      +A+L+    + G GHST +K+ +       Q     +  +   FG    C + KL                 +G D + VV  G  P+S+S EDS + C+++Q+   ++   +  L+ RLR DG    R+P TL +S R   R   +   SR   MP  I+   +S +     K ++      L V   H  V     F LTL+SV  + F S         T DI+KFF      K  +  T          +S+I  ++ CS
Sbjct:   81 TRTIIHIDLDCYYAQVEMVRNPALRTKPLGIQQKYLLVTCNYVARARG---VTKLMRITDALQRCPDLVIVNGEDLTHYREMSY---------------RITELLQQFSPLV--ERLGFDENFIDVSHLVSQRLQREEGRTEVFGHVYGETATNSVVAIETNSPPICTCGCHQRLLLASHIAHEMREALWTQLGLTSCAGVAHNKLLAKLVGSTHKPNDQTTLYPHMLGSLMASLTKVTQVPGIGHSTGKKLSSMGITTLDQLIEAPLSVLKEEFGYQTACTMQKLC----------------QGHDESPVVQSG-PPQSISDEDSFRKCSSLQEAQVKMKALLCSLLQRLRKDG----RQPHTLRLSVRKYSRVHKWTRESRQCGMPDGILHSLQSDEDGTASKLLD------LCVGLFHKMVDTSQPFHLTLISVCFAKFQSQSR-----TTSDITKFFSPRSVKKGCYGDTSNNDNFTVTEESYIEKSEACS 523          
BLAST of Gvermi6937.t1 vs. uniprot
Match: M3ZLY2_XIPMA (UmuC domain-containing protein n=17 Tax=Poeciliinae TaxID=586240 RepID=M3ZLY2_XIPMA)

HSP 1 Score: 196 bits (498), Expect = 2.660e-51
Identity = 164/539 (30.43%), Postives = 251/539 (46.57%), Query Frame = 0
Query:    7 RLRSASTRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAW--LVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAP--FLFKGHVFGMTEDDEVRRILMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSP-RALMGFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVSYR---FRGDGFVATSRSVPMPMEIVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTST-KAENGNGITEDISKFFCKPKKSWASTHRRQ------SHIHPADGCSPEVSPLICPSSRREVQKGKAGHNSDLFGVAICPICSKQ-ISGDNLRQNNHID 529
            ++  ++ R I+  DLDCFYA V +   P L+D P+ I QK++ VT NYVAR R    V K+  V+ A + CPELV + G DLT +RE S +V   + ++  LVER                   LGFDE F+DVT + E ++        F FKG+VF  + + +    L + S IA ++RD +  +  LT CAGV+ +K LAKL     KPN QT  L  N  + +  LS  R + G GH T +++ A      K   +  +GD+    G+                 A+R+ +++ GID + V   G AP+S+S EDS +   ++++V  ++   +  LV R+  DG    R+P+T  ++ R        F   SR  P+P  +     S ++      +     V LAV   H  V +   F LTL++V  SN  S   A +G G           P+KS  S+ + Q      + +   +  S  +   I   SR    KG+   NS+         CS + I+ D  +   H+D
Sbjct:   17 KIPGSAHRVILHFDLDCFYAQVEMIRNPALRDVPLGIQQKYIIVTCNYVARERG---VTKLMSVTDAKEKCPELVLVKGEDLTHYREMSYKVTELLLSYCPLVER-------------------LGFDENFVDVTEMVEQRLAEISETDSFSFKGNVFNHSSNQDANIWLAIGSHIAAEMRDAIRSKIGLTGCAGVATNKLLAKLVSGTFKPNQQTVLLQENVGDIMGCLSGLRKVPGVGHQTAKRLQALGLVSVKDLQLYPLGDLARELGA---------------TTAQRLRNLALGIDESAVTPTG-APQSLSDEDSFKKMCSVKEVMAKIRELLGSLVERMHKDG----RQPQTFRLTIRRFSATNKWFSRESRQAPIPGAVGQKIVSGNIEDAVSQL-----VPLAVKLFHKMVDSNAAFHLTLINVCFSNLQSRGPAASGKGAITSFFTQSASPRKSQISSTQNQVIMVFNATLFTQNAGSRLLDHQISECSRNVPPKGQMTCNSEQSEENYEASCSTEGINSDKTKPPPHVD 508          
BLAST of Gvermi6937.t1 vs. uniprot
Match: UPI001C89BD9B (DNA polymerase iota isoform X1 n=2 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C89BD9B)

HSP 1 Score: 192 bits (489), Expect = 6.030e-50
Identity = 156/472 (33.05%), Postives = 238/472 (50.42%), Query Frame = 0
Query:    6 KRLRSASTRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMTAIRAWLVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGGAPFL-FKGHVFG---MTEDDEVRRILMVASQIAHDLRDHVTQRTELTICAGVSNSKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSPRALM-GFGHSTHEKIIAWAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRGIDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDGLLFSRRPKTLTVS---YRFRGDGFVATSRSVPMPME--IVSVCRSQDVNAVPKAIEAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGITEDISKFFCKPKKSWASTHRR 467
            +RL S S R I+  DLDCFYA V +   P L+ KP+ I QK++ VT NYVAR      V K+  V+ A++ CP+LV + G DLT +RE S +V               +  L +  P    +RLGFDE F+DVT + E ++++     L F GH++    +  D+E  R L V S IA ++R  + +   LT CAGV+++K LAKLA    KPN QTT LP +  E +++L+    + G G+ T EK+        K   +  V D+ +      C L  LA   G E  A+RI +++ GID + V   G  P+S+S EDS +  + +++V ++    ++ L  R+R DG    R+P T  ++   Y      F   SR  P+P    +   C S +  AVP+ +    ++       H  V  +  F LTLL+V  SN  +  +  G+     I+ FF K   +  +  R+
Sbjct:   28 ERLASVSQRVILHFDLDCFYAQVEMIRNPALRAKPLGIQQKYIIVTCNYVAREHG---VNKLMSVTDAVEKCPQLVLVKGEDLTHYREMSYKV---------------TELLMSHCPLV--ERLGFDENFMDVTEMVERRLKQTSISDLSFIGHIYKHEPLAVDEENAR-LAVGSVIASEMRQAIFRTLGLTGCAGVADNKLLAKLASGTFKPNQQTTLLPRSTAELMSSLAGLIKVPGIGYKTREKL--------KALGLVGVRDLQL------CPLPDLAKEFG-EVAAKRIQNLAWGIDDSPVTPAG-PPQSLSDEDSFKKISTLEEVQKKTEELLTNLTERMRKDG----RQPHTFRLTIRRYTVTNRWFNRESRQCPIPSHTGLKIACGSSE--AVPQLLSLSEKL------FHKMVDTREPFHLTLLNVCFSNLQAKSSSRGS-----IASFFQKSPTTQTTCQRQ 445          
The following BLAST results are available for this feature:
BLAST of Gvermi6937.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INM3_9FLOR2.010e-24363.01DNA polymerase iota n=1 Tax=Gracilariopsis chorda ... [more]
R7QGB3_CHOCR1.660e-17348.68DNA Polymerase Iota n=1 Tax=Chondrus crispus TaxID... [more]
A0A7S3ENM2_9RHOD8.140e-5634.44Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A3Q2Q976_FUNHE3.880e-5333.53DNA polymerase iota n=2 Tax=Fundulus heteroclitus ... [more]
UPI00190131BA4.040e-5231.01DNA polymerase iota isoform X4 n=1 Tax=Salvelinus ... [more]
A0A672T306_SINGR1.430e-5131.35DNA polymerase iota n=2 Tax=Sinocyclocheilus graha... [more]
UPI00195469231.700e-5132.56DNA polymerase iota isoform X3 n=1 Tax=Oreochromis... [more]
UPI0018D9001A2.080e-5132.73DNA polymerase iota-like isoform X1 n=3 Tax=Patiri... [more]
M3ZLY2_XIPMA2.660e-5130.43UmuC domain-containing protein n=17 Tax=Poeciliina... [more]
UPI001C89BD9B6.030e-5033.05DNA polymerase iota isoform X1 n=2 Tax=Puntigrus t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 313..441
e-value: 5.5E-21
score: 77.1
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 314..435
NoneNo IPR availableGENE3D3.40.1170.60coord: 23..83
e-value: 3.1E-16
score: 60.7
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 508..535
e-value: 2.3E-5
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..564
NoneNo IPR availablePANTHERPTHR46404DNA POLYMERASE IOTAcoord: 7..470
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 84..220
e-value: 1.6E-22
score: 82.2
IPR001126UmuC domainPFAMPF00817IMScoord: 19..209
e-value: 1.3E-30
score: 106.4
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 16..241
score: 29.907042
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 313..440
e-value: 1.2E-12
score: 48.3
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 12..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:694002..695696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6937.t1Gvermi6937.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 694002..695696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6937.t1 ID=Gvermi6937.t1|Name=Gvermi6937.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=565bp
MRPGKKRLRSASTRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCV
TSNYVARSRAKGAVQKMTPVSKALQMCPELVCIDGSDLTPFREASLEVMT
AIRAWLVERAEQVSAALQAEAPTCACQRLGFDEVFIDVTNLTEAQIERGG
APFLFKGHVFGMTEDDEVRRILMVASQIAHDLRDHVTQRTELTICAGVSN
SKQLAKLAVNMNKPNDQTTFLPGNAEEYIATLSPRALMGFGHSTHEKIIA
WAKQHAKQTAVETVGDVLVLFGSGRCGLNKLADIIGNENQARRILDVSRG
IDTTEVVDCGNAPKSMSAEDSCQSCNNMQDVNRRLTVQVSRLVSRLRSDG
LLFSRRPKTLTVSYRFRGDGFVATSRSVPMPMEIVSVCRSQDVNAVPKAI
EAVRRVALAVLDHHARVCAKNEFDLTLLSVGASNFTSTKAENGNGITEDI
SKFFCKPKKSWASTHRRQSHIHPADGCSPEVSPLICPSSRREVQKGKAGH
NSDLFGVAICPICSKQISGDNLRQNNHIDHCLKAANSDFSSSRSTRDGKK
SKTRTVDSYFAKRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR043128Rev_trsase/Diguanyl_cyclase
IPR001126UmuC
IPR017961DNA_pol_Y-fam_little_finger
IPR043502DNA/RNA_pol_sf