Gvermi6900.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6900.t1
Unique NameGvermi6900.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length360
Homology
BLAST of Gvermi6900.t1 vs. uniprot
Match: A0A2V3IUH7_9FLOR (Replication factor C subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH7_9FLOR)

HSP 1 Score: 542 bits (1397), Expect = 4.580e-192
Identity = 272/348 (78.16%), Postives = 307/348 (88.22%), Query Frame = 0
Query:    4 SSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIRVGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANTADD 351
            ++QLWVEKYRPRAVS++AHQEEVV+TLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQ+YRSRVLELNASDERGIK+VRDKIKVFAQIAV SN NTKG DG TYPCPPYK+IILDEADAIT DAQTALRRTME +SRVTRFIIICNY+SRIIGPLASRCAKFRFNPLP++AMK  + +IA  E VK+SDETL+ LI +S+GDLRKAINTMQSA R++    LD+DSISAAACLVPP VV AFD + +AKG +N SVRKAVD+IL EGYS  QLL QYADRL  +  S G+SK  D+QKA+ +LV+A AEKALIDGCDEK+QLYD+AS ISRIA+  +D
Sbjct:    5 AAQLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQHYRSRVLELNASDERGIKVVRDKIKVFAQIAVVSNVNTKGPDGKTYPCPPYKIIILDEADAITRDAQTALRRTMEVYSRVTRFIIICNYVSRIIGPLASRCAKFRFNPLPMDAMKGHMRRIAKDEGVKVSDETLKFLIHSSDGDLRKAINTMQSAHRMQSDTDLDMDSISAAACLVPPSVVAAFDKATTAKGHTNTSVRKAVDEILSEGYSPIQLLAQYADRLNRRTQSEGVSKMNDMQKASLALVIASAEKALIDGCDEKIQLYDVASSISRIAHAPED 352          
BLAST of Gvermi6900.t1 vs. uniprot
Match: R7Q2F6_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2F6_CHOCR)

HSP 1 Score: 461 bits (1187), Expect = 2.950e-157
Identity = 232/352 (65.91%), Postives = 279/352 (79.26%), Query Frame = 0
Query:    2 KNSSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIR--VGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANTADD 351
            +  SQLWVEKYRPR ++D+ HQ++VVSTLQ+AV E AGRG+LPHLL YGPPGTGKTSTALAL RDLFG QN R+RVLELNASDERGIK+VRDKIK FAQ  VS+    K  D   YPCP +KV+ILDEADAIT DAQTALRRTMEAHS+VTRFI+ICNYISRIIGPL SRCAKFRFN +P+ AM   L+ IA  E V ++D+TL +LIE SEGDLRKAINTMQSA R+       LD+D ISA ACL+PP V+D FDA  +  G +N+ VRK VD+I+++GYS SQLL+QY DRL+     +GI    DLQ++A ++++ADAEK L DGCDEK+QLY++AS+ISRIA   D+
Sbjct:  192 REGSQLWVEKYRPRKITDVTHQDQVVSTLQRAVTESAGRGELPHLLFYGPPGTGKTSTALALVRDLFGVQNLRARVLELNASDERGIKVVRDKIKTFAQTTVSNPVPAKHGDTRKYPCPAFKVVILDEADAITIDAQTALRRTMEAHSKVTRFILICNYISRIIGPLTSRCAKFRFNSIPMHAMMGHLKGIAKREGVDIADDTLRSLIETSEGDLRKAINTMQSAHRMHSMTKGSLDMDMISAVACLIPPRVLDMFDAKTAEVGLTNSEVRKVVDEIVMDGYSVSQLLSQYGDRLLKDDGCDGIRDMNDLQRSAVAVILADAEKGLNDGCDEKLQLYNVASKISRIAGMKDN 543          
BLAST of Gvermi6900.t1 vs. uniprot
Match: UPI001E1D2BC3 (replication factor C subunit 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2BC3)

HSP 1 Score: 369 bits (948), Expect = 5.280e-124
Identity = 196/345 (56.81%), Postives = 251/345 (72.75%), Query Frame = 0
Query:    8 WVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFG-PQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRI-RVGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANTAD 350
            WVEKYRPR V +++HQEEVV+TLQ+ V   A  GD+PH+LLYGPPGTGKTS ALALCRDLFG  + YRSRVLELNASDERGI++VR+KIK FAQ +VS+     G        PP+KVI+LDEADAIT DAQTALRRTME HSR TRFI+ICNY+SRII PLASRCAKFRF PLP  AM  +L+ +A  E V + D+TL  LI+AS GDLRKAI T+QS  RI + GA++    I+ AACLVP  V++ FD S      S+ ++R+ V+ I+ +GYSS++LL++Y+ R++      G++K   +QKAA S+ VA A+  L+DG DE +Q+Y + S+I+      D
Sbjct:    9 WVEKYRPRTVGEVSHQEEVVATLQRIVHSGAAHGDMPHMLLYGPPGTGKTSAALALCRDLFGIGEVYRSRVLELNASDERGIQVVREKIKTFAQRSVSAIPKGAGKSMT----PPFKVIVLDEADAITADAQTALRRTMETHSRTTRFILICNYVSRIIAPLASRCAKFRFKPLPSRAMFDRLQFVAKEESVNVLDDTLHDLIDASGGDLRKAITTLQSTHRITKPGAEVSSSDIANAACLVPKEVLEDFDVSSVNPSMSHKALREKVNSIVRDGYSSAELLSRYSLRIMNA-DGIGVAKLNGVQKAAISIAVAQADANLVDGADELLQMYSVLSKITTAVRNPD 348          
BLAST of Gvermi6900.t1 vs. uniprot
Match: A0A5J4YXB4_PORPP (Replication factor C subunit 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXB4_PORPP)

HSP 1 Score: 338 bits (867), Expect = 1.370e-111
Identity = 185/348 (53.16%), Postives = 238/348 (68.39%), Query Frame = 0
Query:    3 NSSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIR-VGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANTA 349
            N    W EKYRP+ V+ +AHQ+EVV  L  A+ +  G+G+LPHLL YGPPGTGKTSTALALCR +FG Q++++RVLELNASDERGIK+VRD+IK FAQ +V     T    G   P   +K+IILDEADAITTDAQTALRRTME  S  TRFI+ICNYISRII PLASRCAK RF PLP+ AM+A L  IA  E + +S + L+ + EASEGD+R+AI T+QS  R+   G  +D +++  AACLVP  V+D F+A++     S   +   + +I+ +GYS SQL+ Q+  R I +     I+   DLQK+A  L +A+AE  +IDG DE +QL DI  R+      A
Sbjct:    4 NDMMPWSEKYRPQKVAQVAHQDEVVRMLSSALDD--GQGNLPHLLFYGPPGTGKTSTALALCRQMFGAQHFKARVLELNASDERGIKVVRDRIKTFAQTSVPEGRITNKETGRAVPA--FKIIILDEADAITTDAQTALRRTMETFSLTTRFILICNYISRIIAPLASRCAKCRFMPLPMSAMRAHLSHIASGEGLSISTQLLDHMCEASEGDMRRAITTLQSTSRMAGPGGDMDDEALVTAACLVPESVLDDFEAAVLGS-CSFKDMSLVLTNIVDDGYSVSQLILQFGRR-IQENTRASIAGLSDLQKSAVVLKLAEAEAQMIDGADEWLQLQDIGGRLRETVQCA 345          
BLAST of Gvermi6900.t1 vs. uniprot
Match: A0A1X6P2U3_PORUM (AAA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2U3_PORUM)

HSP 1 Score: 321 bits (823), Expect = 8.030e-105
Identity = 182/360 (50.56%), Postives = 241/360 (66.94%), Query Frame = 0
Query:    8 WVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQN---YRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIRVGAQ-LDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPS----NGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANTADDNVAALQNA 359
            WVEKYRP +++D+ HQ + VSTL ++V   + R +LPHLLLYGPPGTGKTSTALAL R+L+GP     Y +RVLELNASDERGI +VR +I  FA  AV +   T       +P PPYK+IILDEADA+T DAQTALRR ME  SRVTRFI+ICNY+SR+I PLASRCAKFRF PLP  A+   L+ IA AE V +  +  + L+ A+ GDLR+AI  +QSA R+   A  L  D+I+AAAC +P  VV   +A+ +A G   A VR AV+ ++  GY+++ +L +   R+ G+        G++   DLQKAA ++ +ADAE+ LIDG DE +QL D+   +  I   A+  +  L +A
Sbjct:   14 WVEKYRPTSIADVRHQAQAVSTLTRSVA--SARANLPHLLLYGPPGTGKTSTALALARELYGPPGSAAYTARVLELNASDERGIAVVRHRINTFAAGAVHTAYTTPAG----HPTPPYKLIILDEADAVTADAQTALRRAMETTSRVTRFILICNYVSRVIPPLASRCAKFRFAPLPAAAVGDTLDSIAGAEGVDLPSDGRDTLVAAAGGDLRRAITLLQSAARVAGPADPLTPDAIAAAACTLPAEVVSGLEAA-AASGQFGA-VRDAVEGVVAGGYAATSVLVELGRRVAGESGGVDVKGGVASMNDLQKAAVAVKLADAERRLIDGADETLQLLDVGCCLMVIGRNAESPMLILPSA 365          
BLAST of Gvermi6900.t1 vs. uniprot
Match: D2VRF7_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VRF7_NAEGR)

HSP 1 Score: 317 bits (812), Expect = 1.860e-103
Identity = 171/357 (47.90%), Postives = 240/357 (67.23%), Query Frame = 0
Query:    2 KNSSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDE-TLEALIEASEGDLRKAINTMQSAQRIRVGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANT-ADDNVAAL 356
            + S Q W EKYRP+ V D+ HQEEVVS L+K+++     G+LPHLL YGPPG GKTSTA A+ + LFGP+ Y++RVLELNASDERGI ++R K+K FAQ AVS N   KG     YPCPP+K+IILDEAD++T DAQ+ALRRTME +S VTRF +ICNY+SRII P+ SRCAKFRF PL    +K +L+ IA  E + + DE  L+ ++  SEGDLRKAI T+QSA R+  G  +  + I+  + LVP  +++  +    ++      +R  V+ I+ +G+++ Q++TQ    L+ +       K  D+Q++   L +++ +K LIDG DE +QL  +AS IS+   T AD +V+ +
Sbjct:    3 QKSQQPWTEKYRPKTVDDVVHQEEVVSALKKSLEV----GNLPHLLFYGPPGNGKTSTATAIAKQLFGPELYKTRVLELNASDERGINVIRTKVKTFAQTAVSENPTGKGK----YPCPPFKIIILDEADSMTVDAQSALRRTMETYSNVTRFCLICNYVSRIIDPITSRCAKFRFKPLEYSLLKERLQYIANQEGITLKDEKVLDTIVGHSEGDLRKAITTLQSASRM-FGNAISQNHIAEISGLVPDEIIE--EILTLSQQTDLGVIRSGVNKIIKQGFAAYQIITQLGRYLLSEACC---VKMDDIQRSKILLKISECDKCLIDGADEFLQLLSLASYISKTLQTDADGDVSMM 345          
BLAST of Gvermi6900.t1 vs. uniprot
Match: A0A4R0RJ17_9APHY (AAA domain-containing protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0RJ17_9APHY)

HSP 1 Score: 317 bits (813), Expect = 3.060e-103
Identity = 173/360 (48.06%), Postives = 238/360 (66.11%), Query Frame = 0
Query:    4 SSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIRVGAQ----LDIDSISAAACLVPPHVVDAFDASISAKGASNA---------------SVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISR 344
            S Q WVEKYRP+ + D++ QE  V+ LQ+ +       +LPH+L YGPPGTGKTST LAL R LFGP N+RSRVLELNASDERGI IVRDKIK FA+   +  A T  SDG TYPCPPYK+IILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF PL   +  ++L +IA AE+V +SDE ++ LI  S+GDLR++I  +QSA R+    +    +    I   A +VP  V+++F A++   GA+N                 +R  V  I+ EGYS++Q+L+Q  D L+   P+    K     KA  ++V A+A+KAL DG DE++ + ++A ++ +
Sbjct:   21 SLQPWVEKYRPKTIDDVSAQEHTVAVLQRTLTST----NLPHMLFYGPPGTGKTSTILALARQLFGPDNFRSRVLELNASDERGISIVRDKIKNFAR--QTPRAQTVASDGKTYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIDPLASRCSKFRFKPLDPTSTSSRLTQIASAENVAVSDEVVQTLISTSQGDLRRSITYLQSASRLSTSTKPPTPITPSDIQEIAGVVPDPVINSFAATLGIDGANNDMDVDDGPAAKAKGFDGIRSKVKQIVREGYSATQILSQLHD-LVVDHPTLAAQK-----KAKCAMVFAEADKALCDGADEELWILEVALQVHK 368          
BLAST of Gvermi6900.t1 vs. uniprot
Match: A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 1.010e-102
Identity = 173/339 (51.03%), Postives = 225/339 (66.37%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIRVGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISR 344
            Q WVEKYRP+ V D+AHQ+EV +TL+ A+      G LPHLL YGPPGTGKTST LAL R LFGP  YR R+LELNASDERGIK+VR+KIK FAQ+AV    +  G     YPCPP+KVIILDEAD +T DAQ+ALRRTME +S VTRF +ICNY++RII PLASRCAKFRF+ L   AM  +L  I+  E VK++ + L+A+++ S GD+RKA+  MQSA +   GA++  + +   A  +P  V DA  ++I  K  S   +  AVDD +  GY  S LL    +  +        +   D  KA     +A+A++ LIDGC+E++QL D+AS  +R
Sbjct:   28 QPWVEKYRPKTVDDVAHQDEVTNTLKGAI----ATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVAVGRATHQAG-----YPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLSYISREEDVKITADGLQAIVDLSGGDMRKAVTAMQSASQFYAGAEVTPEVLVDIAGKIPAEVKDALWSAI--KSGSYHKIVAAVDDFMSSGYPLSTLLEDMQEATVAD------TTIPDHNKADICRRIAEADRCLIDGCNEELQLLDLASVAAR 349          
BLAST of Gvermi6900.t1 vs. uniprot
Match: A0A250X8F3_9CHLO (AAA domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X8F3_9CHLO)

HSP 1 Score: 312 bits (800), Expect = 7.440e-102
Identity = 174/349 (49.86%), Postives = 234/349 (67.05%), Query Frame = 0
Query:    1 MKNSSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIRVGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANTA 349
            M  ++Q WVEKYRP+ V ++A+QEEVV+TL KA++      +LPHLLLYGPPGTGKTSTALA+ R L+GP+  ++RVLELNASD+RGI +VR+K+K FA  AV       G+    YPCPPYK +ILDEAD++T DAQ ALRRTME +S+VTRF  ICNY+SRII PLASRCAKFRF PL    M  +++ I   E + +  E +  L + S GDLR+AI T+QSA R+ VG+Q+D  +I   +  VPP VV    A+   K      ++K V D + EG+++ QLL Q    LI            DL+KA+A+ V+A A+K L+DG DE +QL  +AS+I ++ + +
Sbjct:    1 MTATTQPWVEKYRPKNVGEVAYQEEVVNTLTKALES----ANLPHLLLYGPPGTGKTSTALAIARQLYGPELMKTRVLELNASDDRGITVVREKVKSFAASAV-------GAAAPGYPCPPYKFLILDEADSMTQDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLNEGIMTNRVQYICSKEGIDLGQEAMTTLSQVSGGDLRRAITTLQSAMRL-VGSQVDRKAILDVSGQVPPEVVSRLLAAC--KSPRFQEIQKEVTDAVAEGFAAQQLLIQLQASLIAD------ISIPDLRKASAAEVLAVADKCLVDGADETLQLMSVASQIQKVLHAS 329          
BLAST of Gvermi6900.t1 vs. uniprot
Match: A0A383VL85_TETOB (AAA domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VL85_TETOB)

HSP 1 Score: 311 bits (798), Expect = 1.820e-101
Identity = 172/344 (50.00%), Postives = 230/344 (66.86%), Query Frame = 0
Query:    4 SSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQIAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKMSDETLEALIEASEGDLRKAINTMQSAQRIRVGAQLDIDSISAAACLVPPHVVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPSNGISK--FGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRI 345
            + Q WVEKYRPR V+++AHQ+EVV TL+++++      +LPHLL YGPPGTGKTSTALA+ R L+GP+  ++RV+ELNASDERGI +VR+K+K FA  AV       G     YPCPPYK++ILDEAD++T DAQ ALRRTMEA+S+VTRF  ICNY+SRII PLASRCAKFRF PL  E M  +L  I   E V + DE L  L + + GDLRKA+ T+QSA R+  G Q+D  SI   +  VPP V+       + + +S A V++ V DI+ EGY + Q+L Q    ++   P    S     D Q+A    ++A+++K LIDG DE +QL +IA  + ++
Sbjct:    3 TGQPWVEKYRPRNVNEVAHQDEVVQTLKRSLET----ANLPHLLFYGPPGTGKTSTALAIARQLYGPELMKTRVMELNASDERGISVVRNKVKAFASGAV-------GQPVPGYPCPPYKLLILDEADSMTQDAQNALRRTMEAYSKVTRFCFICNYVSRIIEPLASRCAKFRFRPLHREVMSDRLHFICAKEGVVLQDEALGLLAQVAGGDLRKAVTTLQSAVRLG-GVQVDRQSILDVSGQVPPEVIQQL--LEACQSSSYARVQQQVTDIIAEGYPAQQVLLQLQAAVVPGAPGVAPSSVPMSDKQRAGVCELLAESDKELIDGADEFLQLLNIAGSVQQL 332          
The following BLAST results are available for this feature:
BLAST of Gvermi6900.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUH7_9FLOR4.580e-19278.16Replication factor C subunit 4 n=1 Tax=Gracilariop... [more]
R7Q2F6_CHOCR2.950e-15765.91AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
UPI001E1D2BC35.280e-12456.81replication factor C subunit 2-like n=1 Tax=Mercen... [more]
A0A5J4YXB4_PORPP1.370e-11153.16Replication factor C subunit 2 n=1 Tax=Porphyridiu... [more]
A0A1X6P2U3_PORUM8.030e-10550.56AAA domain-containing protein n=1 Tax=Porphyra umb... [more]
D2VRF7_NAEGR1.860e-10347.90Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A4R0RJ17_9APHY3.060e-10348.06AAA domain-containing protein n=1 Tax=Steccherinum... [more]
A0A6H5JEB4_9PHAE1.010e-10251.03AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A250X8F3_9CHLO7.440e-10249.86AAA domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A383VL85_TETOB1.820e-10150.00AAA domain-containing protein n=2 Tax=Scenedesmace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 42..182
e-value: 1.8E-13
score: 60.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..179
e-value: 1.7E-51
score: 176.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..231
NoneNo IPR availableGENE3D1.10.8.60coord: 181..244
e-value: 4.7E-14
score: 53.6
NoneNo IPR availableGENE3D1.20.272.10coord: 247..345
e-value: 5.1E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 2..344
NoneNo IPR availablePANTHERPTHR11669:SF20REPLICATION FACTOR C SUBUNIT 4coord: 2..344
NoneNo IPR availableCDDcd00009AAAcoord: 23..179
e-value: 7.54729E-22
score: 88.7423
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 180..226
e-value: 3.65227E-14
score: 64.4725
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 46..177
e-value: 2.2E-15
score: 57.3
IPR013748Replication factor C, C-terminalPFAMPF08542Rep_fac_Ccoord: 261..340
e-value: 3.2E-7
score: 30.7
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 265..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:393727..394806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6900.t1Gvermi6900.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 393727..394806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6900.t1 ID=Gvermi6900.t1|Name=Gvermi6900.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=360bp
MKNSSQLWVEKYRPRAVSDIAHQEEVVSTLQKAVKEPAGRGDLPHLLLYG
PPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKIVRDKIKVFAQ
IAVSSNANTKGSDGNTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSR
VTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAQLEKIALAEHVKM
SDETLEALIEASEGDLRKAINTMQSAQRIRVGAQLDIDSISAAACLVPPH
VVDAFDASISAKGASNASVRKAVDDILVEGYSSSQLLTQYADRLIGKRPS
NGISKFGDLQKAAASLVVADAEKALIDGCDEKVQLYDIASRISRIANTAD
DNVAALQNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR013748Rep_factorC_C
IPR008921DNA_pol3_clamp-load_cplx_C