Gvermi6877.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6877.t1
Unique NameGvermi6877.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length191
Homology
BLAST of Gvermi6877.t1 vs. uniprot
Match: A0A2V3IPN4_9FLOR (ADP-ribose pyrophosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPN4_9FLOR)

HSP 1 Score: 184 bits (467), Expect = 1.560e-55
Identity = 106/198 (53.54%), Postives = 135/198 (68.18%), Query Frame = 0
Query:    3 RLSAYMLPR---PVRLNSLHSQRSGSYPHRVVCTATESGSPR-------IAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQDPVLK--AGDDAVDARFFRTDEICSLLMVDGLEARVLKALTAVLDDIKLATEFNGS 188
            RLS +M  R   P+    L SQ     P R   T  ES +P        +AVS ALFR+ +   E+LL++RGNEPNKGLWSLPGG+V+++E L+ AALREL EET + S  C +L +PIDIALVP  +P Y IYVFAG+C  DP L+  AGDDA DARF RTD +  L +V+GLE+RVLKAL+A+LDD + A +F+GS
Sbjct:   33 RLSVFMPSRSIGPLCGTVLDSQSRAGRPVR---TLMESKTPNMRYESLSVAVSMALFRNNRFHSEILLVRRGNEPNKGLWSLPGGRVRDEEDLRCAALRELLEETGIMSHQCHLLSQPIDIALVPSDKPLYHIYVFAGVC--DPQLEPIAGDDARDARFSRTDALSKLTLVNGLESRVLKALSAILDDARTAMKFHGS 225          
BLAST of Gvermi6877.t1 vs. uniprot
Match: UPI001BA615C0 (NUDIX hydrolase n=2 Tax=Carboxylicivirga TaxID=1628153 RepID=UPI001BA615C0)

HSP 1 Score: 82.8 bits (203), Expect = 7.470e-17
Identity = 51/117 (43.59%), Postives = 67/117 (57.26%), Query Frame = 0
Query:   40 PRIAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQDPVLKAG-DDAVDARFFRTDEI 155
            PR AV+T +    +   ++LLI+RGNEP KGLW+LPGG V  DE L DAALREL+EET +D+           I   P  R    +Y       + P+L  G DDA DAR+F  D++
Sbjct:    8 PRPAVTTDVVLLAKQTRQLLLIQRGNEPYKGLWALPGGFVDMDEELSDAALRELKEETGIDTIAIEQFKTYGGINRDPRHRTISVVYTAV---TEHPLLAQGMDDAADARWFDVDKL 121          
BLAST of Gvermi6877.t1 vs. uniprot
Match: A0A2A4LH20_9HYPH (Nudix hydrolase domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A4LH20_9HYPH)

HSP 1 Score: 82.0 bits (201), Expect = 1.370e-16
Identity = 55/128 (42.97%), Postives = 71/128 (55.47%), Query Frame = 0
Query:   39 SPRIAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILP--RPIDIALVPPKRPAYRIYVFAGICKQDPVLKAGDDAVDARFFRTDEICSLLMVDGL 164
            SP +AV   + R      ++LL+KRG EPNKGLW+LPGG V+  ESLQDA +RE+REE  V   N   L     ID   +   +  Y + VF    K     KAGDDA +  +F   +I  L +VDGL
Sbjct:    9 SPILAVVCLIHRS----KDILLVKRGREPNKGLWALPGGLVELGESLQDAIIREVREECNVTIHNPEFLQYREIIDTKSIAMTKFHYVLMVFK-TAKVIGTAKAGDDASEVCWFDVSKIGELSVVDGL 131          
BLAST of Gvermi6877.t1 vs. uniprot
Match: A0A7Y7TYV3_9BACT (NUDIX hydrolase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y7TYV3_9BACT)

HSP 1 Score: 81.3 bits (199), Expect = 2.780e-16
Identity = 43/119 (36.13%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   40 PRIAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQDPVLKAGDDAVDARFFRTDEICSL 158
            P + V  A+FR  + + ++LLI+RGNEP KG+W+LPGG V+E E+L++A +REL+EET +++     L     I   P  R    I+ +  +  ++    AGDDA   ++F ++++  L
Sbjct:   10 PAVTVDAAVFRKLEGKWQILLIQRGNEPFKGMWALPGGFVEETETLEEAVIRELKEETGLETEGLEQLHTYSAINRDPRHRTISTIF-WGTVSLENSTAFAGDDAHAVKWFNSEQLPDL 127          
BLAST of Gvermi6877.t1 vs. uniprot
Match: A0A2N2W126_9BACT (NUDIX hydrolase n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-9 TaxID=2013699 RepID=A0A2N2W126_9BACT)

HSP 1 Score: 81.3 bits (199), Expect = 3.220e-16
Identity = 52/121 (42.98%), Postives = 64/121 (52.89%), Query Frame = 0
Query:   40 PRIAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIY--VFAGICKQDPVLKAGDDAVDARFFRTDEICSL 158
            P + V   +FR  Q  PEVLLIKR NEP KG+W+ PGG +  DE+ +DAALREL EET +             +   P  R     Y  VF  I K   V K GDDA +A +F  D + SL
Sbjct:   11 PAVTVDALIFRLNQGEPEVLLIKRANEPYKGIWAAPGGFLDIDETPEDAALRELHEETGISGVVLYQYHTYGAVNRDPRHRTISIAYTGVFHNIIK---VAKGGDDASEAAWFPIDRLPSL 128          
BLAST of Gvermi6877.t1 vs. uniprot
Match: UPI0011E04D64 (NUDIX domain-containing protein n=1 Tax=Marmoricola caldifontis TaxID=2588938 RepID=UPI0011E04D64)

HSP 1 Score: 80.5 bits (197), Expect = 4.400e-16
Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   54 ARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQDPVLKAGDDAVDARFFRTDEICSLLMVDGL 164
            A   +LL++RG EP +GLWS+PGG+V+ DES + AA RE+ EET +     R+L     +    P    Y I+ F       P L+AGDDA +AR+   DE+  L  V+GL
Sbjct:   16 ATGRLLLVRRGTEPGRGLWSVPGGRVEPDESTEQAAAREVEEETGLRVVPGRLLG---TVERDGPGGVVYVIHDFEARVDGTPALRAGDDADEARWCTPDEVEELPCVEGL 123          
BLAST of Gvermi6877.t1 vs. uniprot
Match: UPI000785B3F0 (NUDIX domain-containing protein n=1 Tax=Aureimonas sp. AU12 TaxID=1638161 RepID=UPI000785B3F0)

HSP 1 Score: 80.5 bits (197), Expect = 5.500e-16
Identity = 53/121 (43.80%), Postives = 68/121 (56.20%), Query Frame = 0
Query:   40 PRIAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQ--DPVLKAGDDAVDARFFRTDEICSL 158
            P +AVS ALFR      EVLL+ RG  P   LWSLPGG+V+  E L+DAA RELREET V++    +  R +  A+  P      I V+A + +   D    A DDA DARFF   E+  +
Sbjct:    6 PVLAVSVALFRG----DEVLLVLRGKPPFADLWSLPGGRVEFGERLEDAARRELREETGVEA-ETLVFAR-LHEAIDAPAGAHAVIAVYAALAEHGADAAFAAADDAADARFFPVSEVAEM 120          
BLAST of Gvermi6877.t1 vs. uniprot
Match: A0A2J6HLQ4_9BACT (NUDIX hydrolase (Fragment) n=1 Tax=Marinilabiliales bacterium TaxID=2053303 RepID=A0A2J6HLQ4_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 6.410e-16
Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:   56 PEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQDPVLKAGDDAVDARFFRTDEI 155
            P+VLLIKRGNEP KG+W++PGG V  DE+ + AA+REL+EETAV         R        P+     +  FA I ++D  ++AGDDA +A +F  + +
Sbjct:    2 PKVLLIKRGNEPYKGMWAIPGGFVDMDETCEAAAVRELQEETAVTGIALTQF-RTYSTVDRDPRHRTISVVYFAFIDEKDVAVQAGDDAAEAAWFSVNSL 100          
BLAST of Gvermi6877.t1 vs. uniprot
Match: A0A7V6RI47_9BACT (NUDIX hydrolase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7V6RI47_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 1.640e-15
Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   40 PRIAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIY--VFAGICKQDPVL---KAGDDAVDARFF 150
            PR AV+T +   +  +  VLL+KR NEP KG+WSLPGG  +E+E+L+D A REL+EET++D C         D    P + P  R+   VF  I   D +L   +AGDDA +A++F
Sbjct:   12 PRPAVATDIILIH--KQSVLLVKRANEPYKGMWSLPGGFNEENETLEDTARRELKEETSLDICFLEQFKAFSD----PKRDPRTRVITIVFYAILPDDFLLSRTQAGDDAAEAKWF 121          
BLAST of Gvermi6877.t1 vs. uniprot
Match: A0A2A5GUE4_9HYPH (NUDIX hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A5GUE4_9HYPH)

HSP 1 Score: 78.6 bits (192), Expect = 2.670e-15
Identity = 54/135 (40.00%), Postives = 73/135 (54.07%), Query Frame = 0
Query:   39 SPRIAVSTALFRHYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVDSCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQDPVLKAGDDAVDARFFRTDEICSLLMVDGLEARVLKALT 173
            +P IAVS AL   +     +L+++RG  P KGLW+LPGGKV+  E+LQ AALRELREET + S     L +  DI         + +  F     Q  VL  GDDA  AR+   D+   L  V+GL+  +  + T
Sbjct:    5 NPTIAVSVAL---WDDNDRLLIVQRGRAPKKGLWALPGGKVELGETLQQAALRELREETGL-SAQLGGLFQVXDII---GSGHHFTLXSFVAHAPQG-VLTPGDDAASARWVNADQAXELPCVEGLQXAIXLSQT 131          
The following BLAST results are available for this feature:
BLAST of Gvermi6877.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPN4_9FLOR1.560e-5553.54ADP-ribose pyrophosphatase n=1 Tax=Gracilariopsis ... [more]
UPI001BA615C07.470e-1743.59NUDIX hydrolase n=2 Tax=Carboxylicivirga TaxID=162... [more]
A0A2A4LH20_9HYPH1.370e-1642.97Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7Y7TYV3_9BACT2.780e-1636.13NUDIX hydrolase n=1 Tax=Bacteroidetes bacterium Ta... [more]
A0A2N2W126_9BACT3.220e-1642.98NUDIX hydrolase n=1 Tax=Bacteroidetes bacterium HG... [more]
UPI0011E04D644.400e-1641.44NUDIX domain-containing protein n=1 Tax=Marmoricol... [more]
UPI000785B3F05.500e-1643.80NUDIX domain-containing protein n=1 Tax=Aureimonas... [more]
A0A2J6HLQ4_9BACT6.410e-1643.00NUDIX hydrolase (Fragment) n=1 Tax=Marinilabiliale... [more]
A0A7V6RI47_9BACT1.640e-1543.10NUDIX hydrolase n=1 Tax=Bacteroidales bacterium Ta... [more]
A0A2A5GUE4_9HYPH2.670e-1540.00NUDIX hydrolase n=1 Tax=Hyphomicrobiales bacterium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020476NUDIX hydrolasePRINTSPR00502NUDIXFAMILYcoord: 72..86
score: 38.92
coord: 86..101
score: 43.22
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 44..163
e-value: 2.0E-16
score: 60.2
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 39..173
score: 14.574828
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 31..168
e-value: 3.2E-25
score: 90.4
NoneNo IPR availablePANTHERPTHR43736ADP-RIBOSE PYROPHOSPHATASEcoord: 38..175
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 24..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:334594..335166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6877.t1Gvermi6877.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 334594..335166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6877.t1 ID=Gvermi6877.t1|Name=Gvermi6877.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=191bp
MCRLSAYMLPRPVRLNSLHSQRSGSYPHRVVCTATESGSPRIAVSTALFR
HYQARPEVLLIKRGNEPNKGLWSLPGGKVKEDESLQDAALRELREETAVD
SCNCRILPRPIDIALVPPKRPAYRIYVFAGICKQDPVLKAGDDAVDARFF
RTDEICSLLMVDGLEARVLKALTAVLDDIKLATEFNGSPY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020476Nudix_hydrolase
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf