Gvermi6871.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6871.t1
Unique NameGvermi6871.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length252
Homology
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BLAST of Gvermi6871.t1 vs. uniprot
Match: A0A2V3IM15_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM15_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 3.090e-22
Identity = 56/75 (74.67%), Postives = 65/75 (86.67%), Query Frame = 0 
Query:  176 EPTPIPGSAAMSADGSTVISDGDNTVSAAADTESGAASANGEEXXIAAGGPGLALGLGTAGRVYVDANGAYYTYQ 250
            EPTP+PGSAA++ADGS VI+DGDNTVS AAD  SG++SANGEE  +A  GPG ALGL TAGRVYVD+NGAYYTY+
Sbjct:  538 EPTPVPGSAAVAADGSGVIADGDNTVSVAADETSGSSSANGEEGAVAVAGPGAALGLATAGRVYVDSNGAYYTYR 612
The following BLAST results are available for this feature:
BLAST of Gvermi6871.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IM15_9FLOR3.090e-2274.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:320838..321593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6871.t1Gvermi6871.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 320838..321593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6871.t1 ID=Gvermi6871.t1|Name=Gvermi6871.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=252bp
MKAVTFLALLGVALAAAPTPCPPGATAPDTTGTYAAPSTAPAYTAPEGGK
APTKTPCPTSTPTGGDYTAPTGGDYTAPSGDYTAPSGDYTAPSGDYTAPS
GDYSAPTAAPKATPCPKGKGDTAPAGGDYAAAPAAPAYPAGGDSATSPAT
APAAGAPAAGAPAAGDAPMEATPAAEPTPIPGSAAMSADGSTVISDGDNT
VSAAADTESGAASANGEEGAIAAGGPGLALGLGTAGRVYVDANGAYYTYQ
A*
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