Gvermi6719.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6719.t1
Unique NameGvermi6719.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length113
Homology
BLAST of Gvermi6719.t1 vs. uniprot
Match: A0A2V3J3I5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3I5_9FLOR)

HSP 1 Score: 172 bits (437), Expect = 7.250e-54
Identity = 80/107 (74.77%), Postives = 89/107 (83.18%), Query Frame = 0
Query:    5 ADDVVNEKYPLYARNKAPFISFNGEEGFYLENKPVKQFAIVDKLTEPLFDYSDPSEFQSVKPQPPSSISWPSGDGRGKAIQGTKGSFDQANIKEYGPFPDFFKRSCD 111
            A  +V+EKYP YARN+APFISF+GE G  LE KPV+QFA+VDK TEPLFDYSDP EF+  KP PPS ISWPSGDGRGK + GTKG F Q N+KEYGPFPDFFKRSCD
Sbjct:    4 AQQIVDEKYPTYARNRAPFISFDGETGIRLEMKPVQQFALVDKTTEPLFDYSDPDEFKPNKPVPPSPISWPSGDGRGKKMNGTKGYFTQPNLKEYGPFPDFFKRSCD 110          
BLAST of Gvermi6719.t1 vs. uniprot
Match: A0A7S1EQ56_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ56_9RHOD)

HSP 1 Score: 119 bits (299), Expect = 1.480e-32
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 0
Query:    4 SADDVVNEKYPLYARNKAPFISFNGEEGFYLENKPVKQFAIVDKLTEPLFDYSDPSEFQSVKPQPPSSISWPSGDGRGKAIQGTKGSFDQANIKEYGPFPDFFKRSCD 111
            SA +VVNEKYPL  ++KAP ISF G  G  +E K ++ F    + TE LF Y D  +FQ VKP+    I+WPSGDGR   + GTKGSF Q N+KEYGPFPD+FKRSCD
Sbjct:   28 SAVEVVNEKYPLSKKHKAPVISFEGNSGLRIEMKKIEAFTEEVESTESLFSY-DNGKFQPVKPKD-MGIAWPSGDGRQVKMTGTKGSFTQPNLKEYGPFPDYFKRSCD 133          
BLAST of Gvermi6719.t1 vs. uniprot
Match: A0A1X6NK47_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK47_PORUM)

HSP 1 Score: 108 bits (270), Expect = 4.660e-28
Identity = 56/99 (56.57%), Postives = 66/99 (66.67%), Query Frame = 0
Query:   13 YPLYARNKAPFISFNGEEGFYLENKPVKQFAIVDKLTEPLFDYSDPSEFQSVKPQPPSSISWPSGDGRGKAIQGTKGSFDQANIKEYGPFPDFFKRSCD 111
            YP   R++APFISF+GE G  LE K V  FA VD  TE LFDY D   F   KP P    +W SGDGR   ++GTKGSF Q +++ YGPFPDF+KRSCD
Sbjct:   44 YPKVQRHEAPFISFDGEAGVKLEMKRVAAFAEVDDDTESLFDY-DVDRFIPNKPGPSPGTAWSSGDGRQVPLKGTKGSFTQPDLRRYGPFPDFYKRSCD 141          
BLAST of Gvermi6719.t1 vs. uniprot
Match: A0A5J4YXP2_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXP2_PORPP)

HSP 1 Score: 101 bits (251), Expect = 3.140e-25
Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    1 MSGSADDVVNEKYPLYARNKAPFISFNGEEGFYLENKPVKQFAIVDKLTEPLFDYSDPSEFQSVKPQPPSSISWPSGDGRGKAIQGTKGSFDQANIKEYGPFPDFFKRSCD 111
            M+ SA DVVN  YP   +NKAP ISF+G++G  LE   ++ FA  D   + LFDYS   +F   KP     I+WPSGDGR   ++G KGSF+Q ++++YGPFPDF KRS D
Sbjct:   30 MAASAADVVNAAYPKNIKNKAPVISFDGKKGVKLEMVTLQTFA-GDDSEDTLFDYSS-GKFMPQKPAD-MGIAWPSGDGRQAEMKGGKGSFNQPDLRKYGPFPDFLKRSMD 137          
The following BLAST results are available for this feature:
BLAST of Gvermi6719.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J3I5_9FLOR7.250e-5474.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1EQ56_9RHOD1.480e-3257.41Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NK47_PORUM4.660e-2856.57Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YXP2_PORPP3.140e-2550.45Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2087044..2087468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6719.t1Gvermi6719.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2087044..2087468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6719.t1 ID=Gvermi6719.t1|Name=Gvermi6719.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=113bp
MSGSADDVVNEKYPLYARNKAPFISFNGEEGFYLENKPVKQFAIVDKLTE
PLFDYSDPSEFQSVKPQPPSSISWPSGDGRGKAIQGTKGSFDQANIKEYG
PFPDFFKRSCDG*
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