Gvermi6700.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6700.t1
Unique NameGvermi6700.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length401
Homology
BLAST of Gvermi6700.t1 vs. uniprot
Match: A0A2V3IXF3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXF3_9FLOR)

HSP 1 Score: 474 bits (1221), Expect = 9.620e-164
Identity = 228/396 (57.58%), Postives = 305/396 (77.02%), Query Frame = 0
Query:    2 AKRLGLPQVLTPLLTVIFFALICTVFVAAAAHPISKTNLTYTAVRGRSMHSVDLSHLKADPSIDPCRGRPHPVPIPTNLSRPPSLFFLHIPKTAGTLVYNIAIQYANKTKGLSCQFLFDGNRYSYNEYQPSFSPVPKPAKHSLEEKAVKAWEDRNMKEKMDLYKQGACRSIRGHVTYSLRDVISKPVVSMTIVRNPLERLVSMFEFALMMIRTQPNKSGWDSWLSGVPLEHELANSSSLLNRGFYDDNGEWIAKSNIGFSFHFYGVLHQLSGIRPLFRDVGKPRSFRIGNAREMAEKAKDNLCSTHILGVQNNMSATVDSILEYMHPYAQWTSKEQEAAKHAVVNRNNHKRGARINDYIPKYALRELERRLGHEIEVYHFAEAIVAHREWLKSSKQ 397
            + +  +P +L   L VI    + TV+ A A   + K      A R + ++S   S    +P+ DPC GRP P PIP +LSRPP+LFFLHIPKTAGTLVYN+ +QYANKTKGL CQFLFDGNRY+ ++Y+PSF      + +S+EEK  +AW++ ++K+K  LYK+GACRS+RGHVTY+LRD I  PVVSMT++R+PLER +SMFEFALMM++T+PN SGWDSW+SG  ++ EL N+SS+LNRGFYDD+G W+ K N+GFSFHFYGVLHQLSGI+P+FR VG+P++FRI NA+EMAEKAK+NLCSTHILG Q N+S  +D++ EYM PYA+WT++E+   +H+  N+N+HKR +++ + +P    RE+ERRL HEIEVY FAE ++A+R+WL+S KQ
Sbjct:   23 SSKHSVPLLLQTTLLVILLLNVTTVW-ARALEEVPKFATNEKADRFQRIYS---SRTAVEPARDPCNGRPSPPPIPNSLSRPPTLFFLHIPKTAGTLVYNVVLQYANKTKGLPCQFLFDGNRYTLHKYEPSFKTSHHFSLNSIEEKGFRAWKENDVKQKEMLYKRGACRSLRGHVTYALRDEIDSPVVSMTVLRDPLERFMSMFEFALMMVKTRPNTSGWDSWMSGASVQRELTNASSILNRGFYDDDGNWMEKDNVGFSFHFYGVLHQLSGIQPIFRGVGEPKAFRIINAKEMAEKAKNNLCSTHILGSQKNISRALDTLFEYMVPYARWTNREKNETRHSHANQNSHKRRSQLAENLPLSTRREIERRLKHEIEVYRFAENVIAYRQWLRSMKQ 414          
BLAST of Gvermi6700.t1 vs. uniprot
Match: A0A2V3J5J3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J3_9FLOR)

HSP 1 Score: 293 bits (750), Expect = 5.370e-93
Identity = 148/333 (44.44%), Postives = 218/333 (65.47%), Query Frame = 0
Query:   63 SIDPCRGRPHPVPIPTNLSRPPSLFFLHIPKTAGTLVYNIAIQYANKTKGLSCQFLFDGNRYSYNEYQPSFSPVPKPAKH-SLEEKAVKAWEDRNMKEKMDLYKQGACRSIRGHVTYSLRDVISKPVVSMTIVRNPLERLVSMFEFALMMIRTQPNKSGWDSWLSGVPLEHELANSSSLLNRGFYDDNGEWIAKSNIGFSFHFYGVLHQLSGIRPLFRDVGKPRSFRIGNAREMAEKAKDNLCSTHILGVQNNMSATVDSILEYMHPYAQWTSKEQEAAKHAVVNRNNHKRGARINDYIPKYALRELERRLGHEIEVYHFAEAIVAHREWLKS 394
            S +PC     P P P   +RPPS+FFLHIPKTAGTL++++  ++A K++GL+C + FDGNR  ++ +  +  P     +H SL+ + + A++ R+ K++  LY QGACR +RGHVT S+      P   +TI+R+PL R VSM+EFA  M++++P  +GWD WL    L  EL N+SSL +RGFYD+ GEW AK N+GFSFHFYGVLHQLSG+ P F   G    FRI NA  MAE AK  LC+TH++G+Q+ +   +D++++   P+AQWT  E+     +VVN+   ++  ++ D++  +  R +  RL HEI+VY FA  +V +R  +K+
Sbjct:   51 SPNPCAAYATPFPQPP--TRPPSVFFLHIPKTAGTLLFSLLQRFAVKSRGLTCSYAFDGNRNPFHHFAVANPPQNTTFEHDSLQHRLLTAYKTRDFKQRATLYAQGACRVVRGHVTASMLAPFETPPYIVTIMRDPLARFVSMYEFARTMMKSRPVVTGWDPWLQADSLLDELNNASSLFHRGFYDEFGEWRAKKNVGFSFHFYGVLHQLSGMTPRFEHEGDKDRFRIVNADVMAETAKRQLCATHLVGLQHQVQDVLDTVMDVTEPFAQWTPAERSQYLKSVVNKTPGRKSRKVEDHLDAHWQRVISERLRHEIDVYEFAVRLVEYRSTVKA 381          
BLAST of Gvermi6700.t1 vs. uniprot
Match: A0A2V3IU09_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU09_9FLOR)

HSP 1 Score: 150 bits (378), Expect = 1.360e-39
Identity = 73/171 (42.69%), Postives = 100/171 (58.48%), Query Frame = 0
Query:  212 IRTQPNKSGWDSWLSGVPLEHELANSSSLLNRGFYDDNGEWIAKSNIGFSFHFYGVLHQLSGIRPLFRDVGKPRSFRIGNAREMAEKAKDNLCSTHILGVQNNMSATVDSILEYMHPYAQWTSKEQEAAKHAVVNRNNHKRGARINDYIPKYALRELERRLGHEIEVYHFA 382
            ++++P  +GWD WL    L  EL N SSL +RGFYD  G+W  K N GFSFHFYGVL QLSGI P F   G    FRI NA  MA  AK  LC+TH++G+   ++  +DS++     +A WT  E+      V+N+   +    + D++  +  R +  RL HEI+VY FA
Sbjct:    1 MKSRPIATGWDPWLQADSLVDELNNPSSLFHRGFYDPYGQWREKRNEGFSFHFYGVLQQLSGITPRFEHEGGKDRFRIANAHVMAHAAKRQLCATHVVGLHYQVAHALDSVMNVTESFAHWTPAERSRYLRIVLNKTPGRSSRNVEDHLDAHWQRVISERLRHEIDVYGFA 171          
The following BLAST results are available for this feature:
BLAST of Gvermi6700.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IXF3_9FLOR9.620e-16457.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5J3_9FLOR5.370e-9344.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IU09_9FLOR1.360e-3942.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 83..207
e-value: 2.9E-7
score: 30.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 83..399
e-value: 1.6E-26
score: 95.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 79..229
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..400
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..28
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1989798..1991000 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6700.t1Gvermi6700.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1989798..1991000 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6700.t1 ID=Gvermi6700.t1|Name=Gvermi6700.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=401bp
MAKRLGLPQVLTPLLTVIFFALICTVFVAAAAHPISKTNLTYTAVRGRSM
HSVDLSHLKADPSIDPCRGRPHPVPIPTNLSRPPSLFFLHIPKTAGTLVY
NIAIQYANKTKGLSCQFLFDGNRYSYNEYQPSFSPVPKPAKHSLEEKAVK
AWEDRNMKEKMDLYKQGACRSIRGHVTYSLRDVISKPVVSMTIVRNPLER
LVSMFEFALMMIRTQPNKSGWDSWLSGVPLEHELANSSSLLNRGFYDDNG
EWIAKSNIGFSFHFYGVLHQLSGIRPLFRDVGKPRSFRIGNAREMAEKAK
DNLCSTHILGVQNNMSATVDSILEYMHPYAQWTSKEQEAAKHAVVNRNNH
KRGARINDYIPKYALRELERRLGHEIEVYHFAEAIVAHREWLKSSKQRRT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase
IPR027417P-loop_NTPase