Gvermi6690.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6690.t1
Unique NameGvermi6690.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length121
Homology
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BLAST of Gvermi6690.t1 vs. uniprot
Match: A0A2V3IQW9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQW9_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 3.010e-43
Identity = 80/109 (73.39%), Postives = 94/109 (86.24%), Query Frame = 0 
Query:   10 SSLDHVETLTNELANAIHAQFQTAAKVAAIDIDTVKAMNSSAETFYAGMNERISALAVAADQVQSQAEDAKKFASDMAALLKKARRLEALVIRLDEYTTRQEAALSRKQ 118
            SSLD VE  TN L+ AIH QFQTA KVAAID+DT+ +MN S +TFYAGMNERIS LA+A+DQVQS A+DA+KFASDM  LL+KA+RLEALV RL+EYT+RQEAAL+RKQ
Sbjct:   11 SSLDAVEKATNALSTAIHTQFQTATKVAAIDLDTITSMNISTQTFYAGMNERISTLALASDQVQSHAQDAQKFASDMTLLLQKAKRLEALVDRLNEYTSRQEAALTRKQ 119
The following BLAST results are available for this feature:
BLAST of Gvermi6690.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQW9_9FLOR3.010e-4373.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PFAMPF10046BLOC1_2coord: 23..113
e-value: 1.3E-10
score: 41.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1941963..1942418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6690.t1Gvermi6690.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1941963..1942418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6690.t1 ID=Gvermi6690.t1|Name=Gvermi6690.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=121bp
MDGDSTENTSSLDHVETLTNELANAIHAQFQTAAKVAAIDIDTVKAMNSS
AETFYAGMNERISALAVAADQVQSQAEDAKKFASDMAALLKKARRLEALV
IRLDEYTTRQEAALSRKQYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019269BLOC1_su2