Gvermi6667.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6667.t1
Unique NameGvermi6667.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length277
Homology
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A2V3INA4_9FLOR (Signal recognition particle receptor subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA4_9FLOR)

HSP 1 Score: 381 bits (979), Expect = 3.750e-131
Identity = 193/275 (70.18%), Postives = 229/275 (83.27%), Query Frame = 0
Query:    1 MVLEQYAGPLRPFLFGAASSIEWELKIRGIDVPPLPTIIDALVVTFVLLIISLAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYLPDTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTFASGSAQELDVRGIVRFAKAYF 275
            MVLEQYAGP RP L   A +I  +LK  G+DVPPL  I+DA+V+T VLL++SL +   R K+ R  L+LVGISGE D+PSVGKTSLF VLRDG FPKYGTVPSMQPN+A  +LP T + V ++D+PGHPRL Y+L E LSRAK +VFVVDGE+FTAQARRDA+LLHD+LTNP+VA  ATP+LIFINKTDAQKCAKEATVKVRL+AELDR+RTASASRL+S+G +G E  EEERAFLG+ENEAF FEH  SPV+ ASGSAQELDV GI+ FA+++F
Sbjct:    1 MVLEQYAGPFRPTLLQGARAISQQLKGLGVDVPPLDFIMDAIVITAVLLLLSLLFIPLRSKDKRDTLLLVGISGESDSPSVGKTSLFTVLRDGVFPKYGTVPSMQPNQAQIWLPATNLLVNLVDYPGHPRLLYKLTEHLSRAKGIVFVVDGEMFTAQARRDAALLHDVLTNPVVANKATPVLIFINKTDAQKCAKEATVKVRLQAELDRVRTASASRLRSVGAEGKEEGEEERAFLGFENEAFCFEHAASPVSIASGSAQELDVEGILEFARSHF 275          
BLAST of Gvermi6667.t1 vs. uniprot
Match: R7Q0G7_CHOCR (Signal recognition particle receptor subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0G7_CHOCR)

HSP 1 Score: 257 bits (657), Expect = 4.550e-82
Identity = 146/290 (50.34%), Postives = 191/290 (65.86%), Query Frame = 0
Query:    1 MVLEQYAGPLRPFLFGAASSIEWELKIRGIDVPPLPTIIDALVVTFVLLIIS-----LAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYLPDTTIRVP---MIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGT-------DGAEAPEEERAFLGYENEAFAFEHIESPVTFASGSAQELDVRGIVRFAKAYF 275
            MVLEQY GP+RP +  AA ++  +++  GI+ P    + DALV+T ++L I+     L+   SRR + R  +++VGISG+ DAP+VGKT+LF  LR G  PK+GTVPSM  N+A F     +I  P    IDFPGHPRL++++   L  AKC+VFVVDG+ FTAQAR+D  LL  ILT+P +A+  TPLLIF NK+D     K  TV+ RLEAEL+R R +S + L+S G         GA A EEERA LGYENE F+F+H   PVTFASGSA   DV  I+ FA++ F
Sbjct:    1 MVLEQYLGPIRPHVIHAAVALGNKMQAYGIEPPAHANLTDALVITVLVLTITVLGIALSTLLSRR-DPRNAVLIVGISGDSDAPAVGKTALFKSLRYGTLPKHGTVPSMTVNDATFVPHGLSISAPPMRWIDFPGHPRLRHKMHAYLQMAKCIVFVVDGQRFTAQARKDTELLFTILTDPFIAEKGTPLLIFCNKSDVANPTKTVTVQTRLEAELERARASSVTTLRSAGVAVDGSGNQGALADEEERAQLGYENEPFSFDHAPGPVTFASGSAVNNDVEAIINFARSSF 289          
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A7S3ACM7_9RHOD (Signal recognition particle receptor subunit beta n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ACM7_9RHOD)

HSP 1 Score: 132 bits (333), Expect = 4.410e-34
Identity = 87/231 (37.66%), Postives = 129/231 (55.84%), Query Frame = 0
Query:   41 ALVVTFVLLIISLAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYLPDTTIRVPMIDFPGH-PRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTFASGSAQELDVRGIVRF 270
            ALV   V L+I +       K  R  +++VG SG  +  SVGKT+L   L++   PKYG +PS+  N A+  +    +RV  +D PG  P L   L + L  AK +VF++D       ARRDA +LHD+LT+  + K   PLLIF NK+D    +    VK  LE EL  +R+   S + ++ T G   P++ + FLG+E E F FEH+ + +TFASGS  + ++  + +F
Sbjct:   12 ALVAVVVFLLIYIVA--GSGKSKRNAILIVGRSGTGENKSVGKTALLKQLKNNEQPKYGLLPSLVVNSAEINVNGKPVRV--MDVPGMVPSL---LEDLLDSAKGIVFMIDSSEIRDNARRDAEILHDVLTHGSIMKEKIPLLIFCNKSDLIASSSPDAVKTYLERELQLIRS---SAVNAVETAGGTKPKQ-KEFLGFEEEVFRFEHVPNKLTFASGSVIKGNIDPVQKF 231          
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A1C7N9D8_9FUNG (Signal recognition particle receptor subunit beta n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N9D8_9FUNG)

HSP 1 Score: 123 bits (309), Expect = 1.180e-30
Identity = 81/224 (36.16%), Postives = 122/224 (54.46%), Query Frame = 0
Query:   41 ALVVTFVLLIISLAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYLPDTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTFASGSAQELDV 264
            ALVV   L +I+L  +   +K+ +  ++L+GIS        GKTS++++L+ G    + TV SM+ NE    L +      ++D PGH R++++  E L   + +VFVVD    T + R  A  L+DIL  P V K   P+LI  NK+D         +K+  E EL+R+R    +R++   +D      E+ AFLGYE EAF FEHI++ V F S S Q+  V
Sbjct:   12 ALVVLTALTLIALTVY--TKKQNKNTILLLGIS------DAGKTSMYILLKSGK--NHPTVSSMKENEGQLTLNNKIFD--LVDIPGHDRVRFRYVEFLPVTRSIVFVVDSTTITRKIRPAAEYLYDILAQPQVQKQKIPVLIACNKSDMITALPTDKIKLLFETELNRLRGTRTARVEQQESD------EQEAFLGYEGEAFKFEHIDNTVEFKSCSVQDQKV 217          
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A507C4G8_9FUNG (Signal recognition particle receptor subunit beta n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C4G8_9FUNG)

HSP 1 Score: 119 bits (297), Expect = 1.160e-28
Identity = 79/242 (32.64%), Postives = 122/242 (50.41%), Query Frame = 0
Query:   38 IIDALVVTFVLLIISLAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYL-----PDTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHAT-----PLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTFASG--SAQELDVRGI 267
            +I  LV    + I+ +  +F +    R   ++ G+S        GKT+L++ LR G      T  SMQ NE  F L           + ++D PGH +L+Y+  E L  A+ ++FVVD    T Q RR A  L+DIL N    +HAT     P+L+  NK+D    A E  ++  LE E+D++R   A+ L    + G     +E  +LG++NEAF F+H+ S +TF     +  E ++ GI
Sbjct:   12 LIFVLVAVLAVTIVVILSYFRKATSRRDTFLITGLS------DAGKTTLYLRLRYGRIKPTHT--SMQENEGLFALHTENADKANAPIHIVDVPGHEKLRYRFAEFLPIARAIIFVVDSSTITQQVRRSAEYLYDILAN----RHATVPKPIPILVVCNKSDHLLAASEGKIRTLLETEIDKLRATRAAALDKQDSGG-----QEEVYLGFDNEAFKFDHVPSDITFVKSCLAGTEDEISGI 236          
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A167K6S3_PHYB8 (Signal recognition particle receptor subunit beta n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167K6S3_PHYB8)

HSP 1 Score: 115 bits (287), Expect = 2.260e-27
Identity = 70/214 (32.71%), Postives = 117/214 (54.67%), Query Frame = 0
Query:   54 AYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYLPDTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTFASGSAQELDVRGI 267
            ++F  ++K+T   ++L+G+S        GKT+L+ ++R G   K  TV SM+ NE    L + T    ++D PGH R++Y+  E L  A+ +VFVVD    + Q R  A  L+++L +        P+LI  NK D      +  ++  LEAE++R+R    + ++   ++G    +++  FLGYE EAF FEH+ES V F   S Q+ ++  +
Sbjct:   24 SFFLLKKKQTGDTILLLGVS------DAGKTALYTLIRFGK--KALTVTSMKENEGSVTLGNKTFG--LVDMPGHERIRYRYSEFLPVARGIVFVVDSTTISRQIRSVAEYLYNVLASLEAQNRKLPVLIACNKADMITALPKDKIQTLLEAEINRLRGTRTAAVEQQNSEG----DDQEGFLGYEGEAFKFEHLESIVDFEVCSVQKEEIDSV 223          
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A1X2GHC7_9FUNG (Signal recognition particle receptor subunit beta n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GHC7_9FUNG)

HSP 1 Score: 108 bits (270), Expect = 1.310e-25
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 0
Query:  104 MQPNEADFYLPDTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTFASGSAQELDVRGI 267
            M+ NEA F L + T+ V  +D PGH RL+Y+  + L+ A+C++FVVD        R  A  L+D+L NPIV     P+LI  NK D      +  V+  LE+EL+R+R+   + ++   +D      E+ A+LGYE EAF F+H+++P+     S     V  I
Sbjct:    1 MKENEASFVLNNKTLEV--VDIPGHERLRYRYADFLNVAQCVLFVVDSTTLHRNVRPVAEYLYDLLANPIVQAQKIPVLIVCNKQDMITALPKIKVQTLLESELNRLRSTRTASVEKQESD------EQEAYLGYEGEAFVFDHVDNPIDLVEVSISSKQVEPI 156          
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A507DBN2_9FUNG (Signal recognition particle receptor subunit beta n=3 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DBN2_9FUNG)

HSP 1 Score: 114 bits (284), Expect = 9.380e-25
Identity = 95/281 (33.81%), Postives = 142/281 (50.53%), Query Frame = 0
Query:   11 RPFLFGAASSIEWEL--KIRGIDVPPL---PTIIDA---LVVTFVLLIISLAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADF--YLPDTTIR------VPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFT--AQARRDASLLHDILTNP-IVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTF-----ASGSAQELDVRGI 267
            RP L      + W +  + +  D PP+      +DA   LVV  V +++ L YF  RR  +R    L  I+G  DA   GKT+L++ LR G      T  SMQ N+  F  +  D  +       +  +D PGH +L+Y+  E L  A+ +VFV+D    T  AQ RR A  L+DIL N    A    P+L+  NK+D    A E  +++ L++E+D++RT  ++ L    + G     +E  FLGY+NEAF FEH+ + + F       GS +  DV G+
Sbjct: 1020 RPTLRTLTLMLAWPIPEEAKLSDDPPMLLGNVYLDAGLVLVVAAVTIVVFLNYF--RRSISRKDTFL--ITGLSDA---GKTTLYLRLRYGRTKPTHT--SMQENDGRFAVFSNDANVSDRSNRLIHAVDVPGHEKLRYRFAEFLPIARAVVFVIDSSTVTQQAQVRRAAEYLYDILANKHAAAPKPVPMLVVCNKSDHLLAASEDKIRILLQSEIDKLRTTRSAALDKQDSGG-----QEEVFLGYDNEAFQFEHVPNEIRFLRCSLVCGSEERDDVSGM 1286          
BLAST of Gvermi6667.t1 vs. uniprot
Match: A0A1Y2EMM1_9FUNG (Signal recognition particle receptor subunit beta n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2EMM1_9FUNG)

HSP 1 Score: 105 bits (261), Expect = 1.670e-23
Identity = 73/219 (33.33%), Postives = 112/219 (51.14%), Query Frame = 0
Query:   38 IIDALVVTFVLLIISLAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYLP--DTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTF 254
            II A V  F++ I+ +  F + +KE +   ++ GI         GKTSLF+ LR+    +  T  S+  NE  F L   D      +IDFPGH +L+Y+  +     K ++FV+D   FT   R     L++IL N  +A++   +LI  NK D      +  +K  LE E++ +R+  A+ ++    D  +       FLGYENEAF FEH+ + VTF
Sbjct:    8 IISAAVAVFLIAILVILKF-TGKKEKKDTFIITGICDS------GKTSLFLKLRNDKIKETHT--SIAENEGRFPLAQEDEDKIFHIIDFPGHYKLRYKYQDFTPITKGVIFVIDSATFTRNERDVTEYLYEILANKHIAENEVSILIVCNKQDYLIALPKERIKTSLENEINNLRSTRAAGVEQQDEDNVDD------FLGYENEAFKFEHLPNQVTF 211          
BLAST of Gvermi6667.t1 vs. uniprot
Match: UPI000644F03C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F03C)

HSP 1 Score: 105 bits (261), Expect = 4.240e-23
Identity = 67/194 (34.54%), Postives = 105/194 (54.12%), Query Frame = 0
Query:   67 LVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGTVPSMQPNEADFYLPDTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVDGELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVKVRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIESPVTFASGSAQ 260
            LVL+G+         GKT+LF+ L   +   Y    S+  N+ +F   +   ++P+ID PGH +++  LP+ LS+A  +++++D   F  Q+  +A  L+DIL +P V +   P+LIF NKTD      E+ V+  LE ELD +R    S     G + A    E   +LG E  +F F+H+ + VTFA GS +
Sbjct:   86 LVLLGLCDS------GKTTLFLKLIQKSLTSYS---SISVNKGNFN--NAGKKLPIIDIPGHAKMRPTLPQYLSQASSIIYLIDSTTFFDQSIEEAQNLYDILVDPSVYERRVPILIFCNKTDLTTIG-ESDVQSILERELDELRKTRGSAPSMAGNEDAGV--EREIYLGNEGTSFQFDHLPNEVTFAQGSVK 265          
The following BLAST results are available for this feature:
BLAST of Gvermi6667.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3INA4_9FLOR3.750e-13170.18Signal recognition particle receptor subunit beta ... [more]
R7Q0G7_CHOCR4.550e-8250.34Signal recognition particle receptor subunit beta ... [more]
A0A7S3ACM7_9RHOD4.410e-3437.66Signal recognition particle receptor subunit beta ... [more]
A0A1C7N9D8_9FUNG1.180e-3036.16Signal recognition particle receptor subunit beta ... [more]
A0A507C4G8_9FUNG1.160e-2832.64Signal recognition particle receptor subunit beta ... [more]
A0A167K6S3_PHYB82.260e-2732.71Signal recognition particle receptor subunit beta ... [more]
A0A1X2GHC7_9FUNG1.310e-2536.59Signal recognition particle receptor subunit beta ... [more]
A0A507DBN2_9FUNG9.380e-2533.81Signal recognition particle receptor subunit beta ... [more]
A0A1Y2EMM1_9FUNG1.670e-2333.33Signal recognition particle receptor subunit beta ... [more]
UPI000644F03C4.240e-2334.54hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019009Signal recognition particle receptor, beta subunitPFAMPF09439SRPRBcoord: 80..251
e-value: 3.5E-24
score: 85.2
IPR019009Signal recognition particle receptor, beta subunitPANTHERPTHR11485:SF34SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT BETAcoord: 27..262
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 58..272
e-value: 1.2E-42
score: 147.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 78..198
NoneNo IPR availablePANTHERPTHR11485TRANSFERRINcoord: 27..262
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1875327..1876157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6667.t1Gvermi6667.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1875327..1876157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6667.t1 ID=Gvermi6667.t1|Name=Gvermi6667.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=277bp
MVLEQYAGPLRPFLFGAASSIEWELKIRGIDVPPLPTIIDALVVTFVLLI
ISLAYFFSRRKETRTCLVLVGISGEFDAPSVGKTSLFMVLRDGAFPKYGT
VPSMQPNEADFYLPDTTIRVPMIDFPGHPRLQYQLPECLSRAKCLVFVVD
GELFTAQARRDASLLHDILTNPIVAKHATPLLIFINKTDAQKCAKEATVK
VRLEAELDRMRTASASRLQSIGTDGAEAPEEERAFLGYENEAFAFEHIES
PVTFASGSAQELDVRGIVRFAKAYFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019009SRP_receptor_beta_su
IPR027417P-loop_NTPase