Gvermi6636.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi6636.t1 vs. uniprot
Match: A0A2V3IND1_9FLOR (E3 ubiquitin-protein ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IND1_9FLOR) HSP 1 Score: 270 bits (691), Expect = 2.480e-91 Identity = 134/151 (88.74%), Postives = 145/151 (96.03%), Query Frame = 0
Query: 1 MGVSWSSVSDCLGDISGSSSTRYNRVPPSRRVEQSSTNSRSERAALRQRCINEEKHLSISVASPGAAIAPPPPPLIPDSNAVYNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVEA-DKLQS 150
MGVSWSSVSDCLGDISGSS+TRYNRVPPSRRVEQSST SR++R ALRQR +++EK L+ISVASPGAAIAPPPPPLIPDSNAVYNLL+DEDEDVCPTCLE YEKDNPKI+SRCGHAFHLQCIVAWETRSGTRFCPICAK+MEYVEA DK+QS
Sbjct: 1 MGVSWSSVSDCLGDISGSSNTRYNRVPPSRRVEQSSTTSRTDRTALRQRYLSDEKQLAISVASPGAAIAPPPPPLIPDSNAVYNLLEDEDEDVCPTCLETYEKDNPKIVSRCGHAFHLQCIVAWETRSGTRFCPICAKVMEYVEAQDKIQS 151
BLAST of Gvermi6636.t1 vs. uniprot
Match: R7Q462_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q462_CHOCR) HSP 1 Score: 198 bits (504), Expect = 9.040e-63 Identity = 108/156 (69.23%), Postives = 123/156 (78.85%), Query Frame = 0
Query: 1 MGVSWSSVSDCLGDIS-GSSSTRYNRVPPSRRVEQSSTNSRS-ER-AALRQRCI---NEEKHLSISVASPGAAIAPPPPPLIPDSNAVYNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVEADKLQS 150
MGVSWSSVSDCLG S GS+ RY+RVPPS RV SS +SR ER +ALRQR +EEK +V S GAAIAP PL+PDSNAVYNLLDDE EDVCPTCLE Y +DNPKI S CGH+FHLQCIVAWETRSG+RFCPICAK+MEY EA++ ++
Sbjct: 1 MGVSWSSVSDCLGSFSDGSAHPRYSRVPPSHRVGPSSVSSRQPERLSALRQRSTPPASEEKLAHCAVPSQGAAIAPXXXPLVPDSNAVYNLLDDEQEDVCPTCLECYAEDNPKISSTCGHSFHLQCIVAWETRSGSRFCPICAKVMEYAEAEQFRT 156
BLAST of Gvermi6636.t1 vs. uniprot
Match: A0A7S1ETP9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETP9_9RHOD) HSP 1 Score: 96.7 bits (239), Expect = 1.020e-22 Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 0
Query: 54 EKHLSISVASPGAAIAPPPPPLIPDSNAVYNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVEADKL 148
++H+ +P P PPPL+PDS AVY+LL+ E E+VCPTCLE Y +NP++ S C H FHL CI W RS +CPICAK M + + ++
Sbjct: 40 KQHIGFEEGTPSP---PLPPPLVPDSKAVYDLLEGEHEEVCPTCLEEYTNENPRMTSMCQHTFHLACIYEWLERSP--YCPICAKKMMFADGSEM 129
BLAST of Gvermi6636.t1 vs. uniprot
Match: A0A7S1TND2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TND2_9RHOD) HSP 1 Score: 91.7 bits (226), Expect = 1.680e-20 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 0
Query: 54 EKHLSISVASPGAAIAPP-PPPLIPDSNAVYNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLM 140
EK++ +P APP PPPL+PD+ AVY+L++ E EDVCPTCLE Y DNPK+ S C H+FHL C+ W RS +CPICA+ M
Sbjct: 64 EKNIGFEEGTP----APPVPPPLVPDAKAVYDLIEGE-EDVCPTCLEEYTIDNPKMTSECQHSFHLACVYEWLERSP--YCPICAQRM 144
BLAST of Gvermi6636.t1 vs. uniprot
Match: M2WVX4_GALSU (Zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WVX4_GALSU) HSP 1 Score: 94.0 bits (232), Expect = 1.890e-20 Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 0
Query: 75 LIPDSNAVYNLL-DDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVE 144
L+P+S AVY L+ +DE ED+CPTCLE Y ++NPKI ++CGH FHL CI W RS R+CP+CA +ME+ E
Sbjct: 204 LVPESTAVYELVSEDEKEDICPTCLEPYTEENPKITAKCGHTFHLSCIYEWLERS--RYCPVCANIMEFEE 272
BLAST of Gvermi6636.t1 vs. uniprot
Match: M2XWK4_GALSU (Zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWK4_GALSU) HSP 1 Score: 88.2 bits (217), Expect = 9.090e-19 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0
Query: 65 GAAIAPPPPPLIPDSNAVYNLLDDED-EDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVE 144
G P PPPL+ D AV +L+++ ED CPTCLE Y+ +NPKI+++CGH++HL C+ W RS +CPICA ME+ E
Sbjct: 122 GGPSPPKPPPLVADRTAVDDLIEESSKEDFCPTCLEPYDAENPKIVAKCGHSYHLACLYEWLERSP--YCPICAARMEFAE 200
BLAST of Gvermi6636.t1 vs. uniprot
Match: A0A0V0H326_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0H326_SOLCH) HSP 1 Score: 83.6 bits (205), Expect = 6.430e-18 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 0
Query: 83 YNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVEAD 146
+++ EDEDVCPTCLE Y DNPKI ++C H +HL CI W+ RS T CP+C KLME+ E +
Sbjct: 59 HDVCSSEDEDVCPTCLEEYTPDNPKIFTKCSHHYHLSCIYEWQERSET--CPVCGKLMEFEETN 120
BLAST of Gvermi6636.t1 vs. uniprot
Match: A0A0A9D226_ARUDO (RING-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9D226_ARUDO) HSP 1 Score: 82.4 bits (202), Expect = 1.070e-17 Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 83 YNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVEA 145
Y ++ EDEDVCPTCLE Y DNPKI+++C H FHL CI W RS T CPIC K ME+ E+
Sbjct: 39 YTVVTSEDEDVCPTCLEEYTPDNPKIITKCCHHFHLGCIYEWMERSDT--CPICGKEMEFCES 99
BLAST of Gvermi6636.t1 vs. uniprot
Match: A0A804PZR7_MAIZE (RING-type domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804PZR7_MAIZE) HSP 1 Score: 81.3 bits (199), Expect = 3.350e-17 Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 83 YNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVEA 145
Y ++ EDEDVCPTCLE Y DNPKI+++C H FHL CI W RS T CPIC K ME+ E+
Sbjct: 43 YAVVASEDEDVCPTCLEEYTPDNPKIITKCCHHFHLGCIYEWMERSDT--CPICGKEMEFCES 103
BLAST of Gvermi6636.t1 vs. uniprot
Match: A0A0E0JT12_ORYPU (RING-type domain-containing protein n=12 Tax=Oryzeae TaxID=147380 RepID=A0A0E0JT12_ORYPU) HSP 1 Score: 82.0 bits (201), Expect = 1.420e-16 Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 0
Query: 80 NAVYNLLDDEDEDVCPTCLEIYEKDNPKILSRCGHAFHLQCIVAWETRSGTRFCPICAKLMEYVE 144
N + ++ EDEDVCPTCLE Y DNPKI+++C H +HL CI W RS T CPIC K ME+ E
Sbjct: 128 NGSFAVVTSEDEDVCPTCLEEYTPDNPKIIAKCSHHYHLSCIYEWMERSDT--CPICGKEMEFCE 190 The following BLAST results are available for this feature:
BLAST of Gvermi6636.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6636.t1 ID=Gvermi6636.t1|Name=Gvermi6636.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=152bpback to top |