Gvermi6625.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6625.t1
Unique NameGvermi6625.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length406
Homology
BLAST of Gvermi6625.t1 vs. uniprot
Match: A0A2V3IRP4_9FLOR (Peptide chain release factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRP4_9FLOR)

HSP 1 Score: 649 bits (1674), Expect = 1.100e-232
Identity = 333/401 (83.04%), Postives = 359/401 (89.53%), Query Frame = 0
Query:    5 FATSPVLGRCTFTQNAFVCRSRPHPTTPAIRTLHRAVPTMREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENIENE 405
            FA S  LG   F    F CR R       +    R VP M   GMIRKL++TKD F+SLT+QLADP +MS+SKELMRVSKARAALEPVVQAY+EWS S+ +LE+AREMF+EA+DDPELREMAREEI ILE +L ELE  LK LLLPKDPNDEKNCMLE+RAGTGGDEASIWAGDLVRVYMKYA +QNWTVSLVSES GTDGGYKECILEITGD+VYSKMKYEAGVHRVQRVPATETQGRVHTSTAT+AIMPEVD+VEVKIDPKDIELTTARSGGAGGQNVNKVETAVDL+HKPTGIR+FCTQERSQLKNRERA+QILRAKLYEMELAE+NAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNF LQDFLNG+VE+I+QACIFKDQQAALE IENE
Sbjct:    7 FAVSVTLGTNAFLSTRFSCRRRAEKELQPLSRSLRYVPRMDATGMIRKLQSTKDTFESLTMQLADPDVMSNSKELMRVSKARAALEPVVQAYDEWSNSTTSLEEAREMFAEASDDPELREMAREEIGILEGQLGELESQLKTLLLPKDPNDEKNCMLEVRAGTGGDEASIWAGDLVRVYMKYAGAQNWTVSLVSESPGTDGGYKECILEITGDSVYSKMKYEAGVHRVQRVPATETQGRVHTSTATIAIMPEVDDVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLVHKPTGIRVFCTQERSQLKNRERALQILRAKLYEMELAEQNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFSLQDFLNGSVEDIIQACIFKDQQAALEGIENE 407          
BLAST of Gvermi6625.t1 vs. uniprot
Match: R7QHP1_CHOCR (Peptide chain release factor RF1, Rhodoplastic n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHP1_CHOCR)

HSP 1 Score: 591 bits (1523), Expect = 2.540e-210
Identity = 296/360 (82.22%), Postives = 332/360 (92.22%), Query Frame = 0
Query:   44 MREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENIE 403
            M    MIRKL++TK+ FDS+T+QLADP +  DSKELMR+SKARAALEPVV AY++W  S++ LE+A+E+FSEA+DD E++E+AREE++ LE+ L +LE+ LK+LLLPKDPNDEKNCMLE+RAGTGGDEASIWAGDLVRVYMKYA  Q W+V+LVSES G+DGGYKECILEI GDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTAT+AIMPEVD+VEVKIDPKDIEL+T RSGGAGGQNVNKVETAVDL+HKPTGIRIFCTQERSQLKNRERAMQILRAKLYE+ELAE+NAEIYGRRKSQVGTGSRSEKIRTYNYKDSR TDHRLGQNF LQDFLNG VENIVQACIF+DQQA LE +E
Sbjct:    1 MDAGAMIRKLQSTKETFDSMTMQLADPDVCGDSKELMRISKARAALEPVVAAYDDWMASTSALEEAKELFSEASDDAEMKEIAREEVNSLEQHLRDLEEMLKILLLPKDPNDEKNCMLEVRAGTGGDEASIWAGDLVRVYMKYAAEQGWSVALVSESEGSDGGYKECILEIRGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATLAIMPEVDDVEVKIDPKDIELSTTRSGGAGGQNVNKVETAVDLMHKPTGIRIFCTQERSQLKNRERAMQILRAKLYELELAEQNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRCTDHRLGQNFSLQDFLNGNVENIVQACIFQDQQAMLEALE 360          
BLAST of Gvermi6625.t1 vs. uniprot
Match: A0A1X6PEJ9_PORUM (RF_PROK_I domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEJ9_PORUM)

HSP 1 Score: 525 bits (1352), Expect = 7.730e-183
Identity = 260/359 (72.42%), Postives = 309/359 (86.07%), Query Frame = 0
Query:   47 AGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENIENE 405
            A +IRKL+TT+D F++L  QLADP + +D++ELMR+SK RA LEPVV+AY EW  S+  L++ARE+FS+A DD E+REMAR E+  LE+ +EELE  LKVLLLPKDPNDEKNCMLE+RAGTGGDEA IWA DLVRVY KYA + +W VS VSES    GG KEC+LE+TGDAVYSK+KYEAGVHRVQRVPATE+QGRVHTST+TVAIMPEVDEV+VKID KD++++T RSGG+GGQNVNKVETAVDL+HKPTGIR+FCTQERSQLKNRE AMQILRAKLYE+EL   NAE+ GRR++QVGTG+RSEKIRTYNYKDSRV+DHRLG+NF L  FL G +++++QACIF DQQ  LE + NE
Sbjct:  101 ASLIRKLDTTRDTFENLDRQLADPDVCNDARELMRLSKVRATLEPVVEAYEEWLSSNEQLKEARELFSDAGDDAEMREMARAEVSELEEVIEELESRLKVLLLPKDPNDEKNCMLEIRAGTGGDEAGIWASDLVRVYTKYAEAMSWRVSTVSESLSEAGGVKECVLEVTGDAVYSKLKYEAGVHRVQRVPATESQGRVHTSTSTVAIMPEVDEVDVKIDMKDVDISTTRSGGSGGQNVNKVETAVDLMHKPTGIRVFCTQERSQLKNRELAMQILRAKLYELELEAHNAEVSGRRRAQVGTGARSEKIRTYNYKDSRVSDHRLGRNFSLNAFLEGDIDDMIQACIFADQQEQLEEMANE 459          
BLAST of Gvermi6625.t1 vs. uniprot
Match: RF1_CYAP4 (Peptide chain release factor 1 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=RF1_CYAP4)

HSP 1 Score: 484 bits (1247), Expect = 2.090e-168
Identity = 247/359 (68.80%), Postives = 291/359 (81.06%), Query Frame = 0
Query:   44 MREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENI 402
            M E+ ++ KL++ +  F  LT +LADP + +D +E  RV+KARA+LE  V  Y+ W     +L +AR++  EA  DPEL+EMA +E++ L ++   LE  LK+LLLP+DPND+KN MLE+RAGTGGDEASIWAGDLVR+Y +YA SQ W V LVSES G  GG+KE ILEI G+ VYSK+KYEAGVHRVQRVPATE  GRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDL HKPTGIRIFCT+ERSQL+N+ERAMQILRAKLYEM+L E+ +EI  RR+SQVGTGSRSEKIRTYNYKD+R TDHRLGQNFPL   L G +E I+QACI +DQQ  L  +
Sbjct:    1 MAESYLLDKLKSVELTFHELTRRLADPEVATDPEEFQRVAKARASLEETVDTYDTWKTVQQHLAEARQIAREAASDPELQEMAVQEVNELTEKSAHLEQRLKILLLPRDPNDDKNIMLEIRAGTGGDEASIWAGDLVRLYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKLKYEAGVHRVQRVPATEASGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLQEQQSEITSRRRSQVGTGSRSEKIRTYNYKDNRATDHRLGQNFPLNQVLEGDIEGIIQACITQDQQEQLAEL 359          
BLAST of Gvermi6625.t1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK)

HSP 1 Score: 483 bits (1242), Expect = 7.530e-167
Identity = 247/382 (64.66%), Postives = 302/382 (79.06%), Query Frame = 0
Query:   25 SRPHPTTPAIRT-LHRAVPTMREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENIENE 405
            S PHP        L  A+P+     M  KL+  +  F+ LT  LADP +++DSK+LM++SK R+ LE +V+A+ E+     +L  A+E+FSE+  DPE+REMAR+EID  E  ++EL++ LK+LLLP DPNDE+NCMLE+RAGTGGDEA IWAGDLV VY KYA +Q W  +L+ ES+   GG K C LE+ G+AVYSK+KYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEV VKIDPKDIELTTARSGGAGGQNVNKVETA DL HKPTGIRIFCTQERSQLKN+E AM +LRA+LYEMEL ++ +E+ G R++QVGTG+RSEKIRTYN+KDSR +DHR+GQNFPLQ FL+G V++I+QA I  DQQ  L+ +  E
Sbjct:   34 SFPHPVARKTSGGLKMAIPSY----MQDKLKGIEQTFNQLTNSLADPDVLNDSKQLMKISKERSKLEEIVEAFQEYKSREADLTGAKELFSESAGDPEMREMARDEIDECETVMDELQEKLKILLLPTDPNDERNCMLEIRAGTGGDEAGIWAGDLVEVYKKYAQTQGWACTLIEESAADMGGVKSCTLEVRGEAVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDPKDIELTTARSGGAGGQNVNKVETAADLFHKPTGIRIFCTQERSQLKNKEMAMNLLRARLYEMELEKQRSEVSGARRAQVGTGARSEKIRTYNWKDSRCSDHRIGQNFPLQMFLDGKVDDIIQALIVSDQQDQLKEMAEE 411          
BLAST of Gvermi6625.t1 vs. uniprot
Match: A0A845WY81_9CYAN (Peptide chain release factor 1 n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845WY81_9CYAN)

HSP 1 Score: 478 bits (1230), Expect = 9.550e-166
Identity = 237/359 (66.02%), Postives = 293/359 (81.62%), Query Frame = 0
Query:   44 MREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENI 402
            M E+ ++ KL++ +  F+ L  +LADP ++++  EL +V+KARA+LE  V AY EW  ++  L  A+E+  ++ DDPEL+ MA +E+  LE ++  LE  LK+LLLP DPND+KN MLE+RAGTGGDEASIWAGDLVR+Y +YA SQ W VSLVSES+G  GG+KE ILEI GD VYSK+K+EAGVHRVQRVP TE  GRVHTSTAT+A+MPEVD+VEV IDPKD++++TARSGGAGGQNVNKVETAVDLIHKPTGIR+FCT+ERSQL+NRERAMQILRAKLYEM+L E+ A +   R+SQVGTG+RSEKIRTYNYKD+RVTDHRLGQNFPL   L G + NIV+AC+ +DQQ  LE +
Sbjct:    1 MAESYLLDKLKSVEQTFNELNRRLADPDVVTNPDELQKVAKARASLEETVLAYGEWQQANEELVGAKEILKDSQDDPELQSMASQEVTTLEDQINTLEQRLKILLLPSDPNDDKNIMLEVRAGTGGDEASIWAGDLVRIYSRYADSQQWRVSLVSESAGEMGGFKEAILEIQGDRVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATIAVMPEVDDVEVDIDPKDLDISTARSGGAGGQNVNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKLQEQQAAVTSLRRSQVGTGARSEKIRTYNYKDNRVTDHRLGQNFPLSTALTGDINNIVEACVSQDQQEQLEQL 359          
BLAST of Gvermi6625.t1 vs. uniprot
Match: K9XZS4_STAC7 (Peptide chain release factor 1 n=2 Tax=Stanieria TaxID=102115 RepID=K9XZS4_STAC7)

HSP 1 Score: 478 bits (1229), Expect = 1.400e-165
Identity = 240/361 (66.48%), Postives = 292/361 (80.89%), Query Frame = 0
Query:   44 MREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENIEN 404
            M E  ++ KL++ +  +  LT +L DP + ++  EL +++K R++LE  V  Y EW  ++  L  A+E+F EA  D E+REMA  E+D LE+++ +LE  LK+LLLP+DPND+KN MLE+RAGTGGDEASIWAGDLVR+Y +YA SQNW V LVSES    GG+KE ILEI GD+VYSK+K+EAGVHRVQRVP TE  GRVHTSTATVAIMPEVDEVEV+IDPKDIEL TARSGGAGGQNVNKVETAVDLIHKPTGIRIFCT+ERSQL+NRERAMQILRAKLY+M+LAE+  E+ G R+SQVGTG+RSEKIRTYNYKD+RVTDHRLGQNF L   L G +E+++Q+CI +DQQ  L  + N
Sbjct:    1 MAEVYLLEKLKSVEQTYQELTRRLGDPDIATNPDELQKIAKIRSSLEETVNTYEEWKKATEELAGAKEIFKEAGGDSEMREMAALEVDQLEEKINQLESRLKILLLPRDPNDDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQNWNVKLVSESLADMGGFKEAILEIQGDSVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMKLAEQQQEVRGLRQSQVGTGARSEKIRTYNYKDNRVTDHRLGQNFALASALEGNIEDMIQSCISQDQQERLAALAN 361          
BLAST of Gvermi6625.t1 vs. uniprot
Match: A0A7J7IFF6_9RHOD (RF_PROK_I domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFF6_9RHOD)

HSP 1 Score: 479 bits (1234), Expect = 1.810e-165
Identity = 236/360 (65.56%), Postives = 294/360 (81.67%), Query Frame = 0
Query:   46 EAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENIENE 405
            + G++ KL++T +AF++LT  L++P + +DS EL R++KARA LEP+ +AYNEW    N +    E+  E   D ELRE+AR EI     +++E E+ +KVLLLP+DPND+KN MLE+RAGTGGDEASIW GDLV VY +YA S+NW V ++S S    GG+KECILEI+GD VYS++K+EAGVHRVQRVPATET GRVHTSTATVAIMPEV+E+EVKIDPKD+E+ TARSGGAGGQNVNKVETAVDL HKPTGIR+FCT+ERSQ KNRERAMQILRAKLYE++L E+  +I G R+SQVGTGSRSEK+RTYNYKD+RVTDHRL QNFPL +FL G ++ I+ AC F+DQ+  +E++ NE
Sbjct:   52 DPGLVHKLQSTSEAFEALTKSLSNPEICTDSAELARITKARAKLEPIYEAYNEWKGLQNTIASTTELLEE---DEELRELARAEIQEATAKMQETEERIKVLLLPQDPNDDKNIMLEVRAGTGGDEASIWCGDLVNVYTRYAQSRNWNVKVLSASDADMGGFKECILEISGDRVYSRLKFEAGVHRVQRVPATETMGRVHTSTATVAIMPEVNEIEVKIDPKDVEIQTARSGGAGGQNVNKVETAVDLYHKPTGIRVFCTEERSQQKNRERAMQILRAKLYEIQLNEQREKIEGLRRSQVGTGSRSEKVRTYNYKDARVTDHRLSQNFPLGNFLEGKLDEIIDACAFEDQRRRMESMMNE 408          
BLAST of Gvermi6625.t1 vs. uniprot
Match: A0A352ARB5_9CYAN (Peptide chain release factor 1 n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352ARB5_9CYAN)

HSP 1 Score: 477 bits (1228), Expect = 2.060e-165
Identity = 237/359 (66.02%), Postives = 294/359 (81.89%), Query Frame = 0
Query:   44 MREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENI 402
            M E  ++ KL++ +  F+ LT +LADP + +D  E+ RV+KAR++LE VVQ Y+ W  +  +L   R++  EA +DPEL+EMA  E++ L+ +LE+LE  LK+LLLP+DPND+KN MLE+RAGTGGDEASIWAGDL+R+Y +YA SQNW V L+SES    GG+KE ILEI GD VYSK+K+EAGVHRVQRVP TE  GRVHTSTATVA+MPEV+EVEV+IDPKD+E+ TARSGGAGGQNVNKVETAVDLIHKPTGIR+FCT+ERSQL+NRERAMQILRAKLYE++L E+ A +   R+SQVGTGSRSEKIRTYNYKD+RVTDHRLGQN+ L   L G +E+++QACI +DQQ  LE +
Sbjct:    1 MAETYLLEKLQSVEQTFNELTRRLADPDIATDPVEMQRVTKARSSLEEVVQTYDIWKAAQQDLAGTRQVLKEANNDPELQEMAALEVEELQTKLEQLETRLKILLLPRDPNDDKNIMLEIRAGTGGDEASIWAGDLLRMYSRYAESQNWRVKLLSESPADMGGFKETILEIQGDRVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVNEVEVQIDPKDLEIKTARSGGAGGQNVNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEIKLQEQQAAVTSMRRSQVGTGSRSEKIRTYNYKDNRVTDHRLGQNYSLNTILEGDLESVIQACISQDQQERLEEL 359          
BLAST of Gvermi6625.t1 vs. uniprot
Match: A0A7C3PEG8_9CYAN (Peptide chain release factor 1 n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PEG8_9CYAN)

HSP 1 Score: 477 bits (1227), Expect = 2.830e-165
Identity = 240/362 (66.30%), Postives = 292/362 (80.66%), Query Frame = 0
Query:   44 MREAGMIRKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWSISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLPKDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSESSGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALENIENE 405
            M EA ++ KL++ +  F+ LT +LADP + +D  EL RV+KAR++LE VV AY+EW      L +AR+++ E+ +DPEL+E+A  E+D LE R+E LE  LKVLLLP DPND+KN MLE+RAGTGGDEASIWAGDLVR+Y +YA  QNW V LVSES+   GG+KE ILEI GD VYSK+K+EAGVHRVQRVPATE+QGRVHTSTATVA+MPE+D+VEV IDP ++E+TT RSGGAGGQNVNKVETAVDL+HKPTGIRI C +ERSQL+NRERAMQILRAKL+EM+L E+ A +   R+ QVGTGSRSEKIRTYNYKD+RVTDHRLGQNF L   L G +E ++Q CI +DQQ  LE +  E
Sbjct:    1 MAEAYLLEKLKSVEQTFNELTRRLADPDVAADPSELQRVAKARSSLEDVVLAYDEWKALQEQLVEARQIYKESANDPELQEIASLEVDTLEDRIEHLEGRLKVLLLPSDPNDDKNIMLEVRAGTGGDEASIWAGDLVRMYSRYAERQNWRVKLVSESTADMGGFKEAILEIQGDRVYSKLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEIDDVEVHIDPNEVEITTIRSGGAGGQNVNKVETAVDLLHKPTGIRIKCMEERSQLQNRERAMQILRAKLFEMKLQEQQAAVTSARRMQVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLNPILEGDLEEVIQTCITQDQQDQLEALAAE 362          
The following BLAST results are available for this feature:
BLAST of Gvermi6625.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRP4_9FLOR1.100e-23283.04Peptide chain release factor 1 n=1 Tax=Gracilariop... [more]
R7QHP1_CHOCR2.540e-21082.22Peptide chain release factor RF1, Rhodoplastic n=1... [more]
A0A1X6PEJ9_PORUM7.730e-18372.42RF_PROK_I domain-containing protein n=1 Tax=Porphy... [more]
RF1_CYAP42.090e-16868.80Peptide chain release factor 1 n=1 Tax=Cyanothece ... [more]
A0A6S9M8F3_HETAK7.530e-16764.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A845WY81_9CYAN9.550e-16666.02Peptide chain release factor 1 n=1 Tax=Spirulina s... [more]
K9XZS4_STAC71.400e-16566.48Peptide chain release factor 1 n=2 Tax=Stanieria T... [more]
A0A7J7IFF6_9RHOD1.810e-16565.56RF_PROK_I domain-containing protein n=1 Tax=Cyanid... [more]
A0A352ARB5_9CYAN2.060e-16566.02Peptide chain release factor 1 n=1 Tax=Cyanobacter... [more]
A0A7C3PEG8_9CYAN2.830e-16566.30Peptide chain release factor 1 n=1 Tax=Oscillatori... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableGENE3D3.30.70.1660coord: 335..405
e-value: 2.0E-10
score: 42.6
NoneNo IPR availableGENE3D6.10.140.1950coord: 40..154
e-value: 4.9E-30
score: 106.0
NoneNo IPR availableGENE3D3.30.70.1660coord: 155..267
e-value: 1.7E-43
score: 150.3
NoneNo IPR availableGENE3D3.30.160.20coord: 268..334
e-value: 6.0E-28
score: 98.5
NoneNo IPR availablePANTHERPTHR43804:SF4PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTICcoord: 38..404
NoneNo IPR availablePANTHERPTHR43804LD18447Pcoord: 38..404
IPR005139Peptide chain release factorSMARTSM00937PCRF_a_2coord: 111..226
e-value: 3.4E-57
score: 206.0
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 58..251
e-value: 3.6E-69
score: 232.5
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 258..368
e-value: 1.1E-38
score: 131.7
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 275..291
IPR004373Peptide chain release factor 1TIGRFAMTIGR00019TIGR00019coord: 47..404
e-value: 2.4E-149
score: 495.1
IPR004373Peptide chain release factor 1HAMAPMF_00093Rel_fac_1coord: 49..403
score: 35.552258
IPR045853Peptide chain release factor class I superfamilySUPERFAMILY75620Release factorcoord: 58..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1756851..1758068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6625.t1Gvermi6625.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1756851..1758068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6625.t1 ID=Gvermi6625.t1|Name=Gvermi6625.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=406bp
MPLFFATSPVLGRCTFTQNAFVCRSRPHPTTPAIRTLHRAVPTMREAGMI
RKLETTKDAFDSLTLQLADPGLMSDSKELMRVSKARAALEPVVQAYNEWS
ISSNNLEQAREMFSEATDDPELREMAREEIDILEKRLEELEDHLKVLLLP
KDPNDEKNCMLELRAGTGGDEASIWAGDLVRVYMKYATSQNWTVSLVSES
SGTDGGYKECILEITGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTAT
VAIMPEVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLIHKPTGI
RIFCTQERSQLKNRERAMQILRAKLYEMELAERNAEIYGRRKSQVGTGSR
SEKIRTYNYKDSRVTDHRLGQNFPLQDFLNGAVENIVQACIFKDQQAALE
NIENE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF
IPR000352Pep_chain_release_fac_I
IPR004373RF-1
IPR045853Pep_chain_release_fac_I_sf