Gvermi6620.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6620.t1
Unique NameGvermi6620.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length129
Homology
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BLAST of Gvermi6620.t1 vs. uniprot
Match: A0A2V3IP48_9FLOR (Protein unc-45 homolog B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP48_9FLOR)

HSP 1 Score: 160 bits (406), Expect = 2.960e-43
Identity = 81/122 (66.39%), Postives = 96/122 (78.69%), Query Frame = 0 
Query:    6 DVEKPSTRPRPPPYDPLLPSPPTHPTPMHQRQSSPNDKSNQLTVNQTAVPMDTPHESPHDLFCLAKEYENRGRVSDAINLYLKAALNGHLSAMVSYASHVISSDERAAFVWFQSAAVRGHPR 127
            D  +P++R  PPPYDPLLP+P +H       Q S    +NQLTVN   VPMDTPHE+PHDLFCLAKEYE R R SDA NLYLKAA+NGHLSAMV+YAS ++++DERAAFVWF++AA RGHPR
Sbjct:    7 DNVQPASRRTPPPYDPLLPTPSSHAMQTQHVQQS----NNQLTVNHHPVPMDTPHETPHDLFCLAKEYEARARHSDAANLYLKAAMNGHLSAMVAYASQLVATDERAAFVWFRAAAERGHPR 124
The following BLAST results are available for this feature:
BLAST of Gvermi6620.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IP48_9FLOR2.960e-4366.39Protein unc-45 homolog B n=1 Tax=Gracilariopsis ch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 58..127
e-value: 1.4E-6
score: 30.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 66..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1737458..1738005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6620.t1Gvermi6620.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1737458..1738005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6620.t1 ID=Gvermi6620.t1|Name=Gvermi6620.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=129bp
MPAGIDVEKPSTRPRPPPYDPLLPSPPTHPTPMHQRQSSPNDKSNQLTVN
QTAVPMDTPHESPHDLFCLAKEYENRGRVSDAINLYLKAALNGHLSAMVS
YASHVISSDERAAFVWFQSAAVRGHPRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf