Gvermi6604.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6604.t1
Unique NameGvermi6604.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length226
Homology
BLAST of Gvermi6604.t1 vs. uniprot
Match: UPI001E1E03D2 (coenzyme Q-binding protein COQ10 homolog, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E03D2)

HSP 1 Score: 206 bits (525), Expect = 4.320e-64
Identity = 104/171 (60.82%), Postives = 127/171 (74.27%), Query Frame = 0
Query:   47 RPADSFVPTPKRSNSSTPRT--RSPHSRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFEPVGD--ITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRCVAKY 213
            RP+ +   T +R    TP T     HSR H E R +PF P +LY VVA+VD YSEFVPWCTSS V +RI + H++A+L VGF+VLSEKYTS++TL P+RS+ ADVPNS+LF+YLI DWTF+P  D   T+L FYVEF FRNP+YQRVT++FF EVVK MV AFE R V KY
Sbjct:   23 RPSPAVSDTIRRWFCETPSTFAAKDHSRKHLETRTLPFAPHELYSVVADVDSYSEFVPWCTSSNVVKRIGQDHLVAELGVGFQVLSEKYTSLVTLDPHRSIKADVPNSTLFNYLINDWTFKPGHDKSTTELTFYVEFQFRNPLYQRVTDLFFNEVVKNMVNAFERRAVVKY 193          
BLAST of Gvermi6604.t1 vs. uniprot
Match: A0A7J7INZ2_9RHOD (Coenzyme Q-binding protein coq10, mitochondrial n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INZ2_9RHOD)

HSP 1 Score: 146 bits (368), Expect = 1.190e-39
Identity = 73/158 (46.20%), Postives = 104/158 (65.82%), Query Frame = 0
Query:   64 PRTRSPHSRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFEPVGDITK--LKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRC--VAKYHGAE 217
            P TR+  SR+  E ++VPFT  +LY VVA+V+ Y EFVPWCT SRV RR  E  + A+L VGF++  E+Y S++ L+P R+V A    S LF+YL+ +W F P  +  +  + FYV+F FR+P+Y+   ++FF EV K+MV AFE R   V + HG +
Sbjct:   95 PATRATLSRSFEESKLVPFTTHELYSVVADVERYQEFVPWCTGSRVVRRFGERLLEAELKVGFQLFHEEYISLVRLEPGRAVRATATTSRLFEYLVNEWRFRPAENPKESWVYFYVDFRFRSPLYRTAVDLFFNEVAKKMVRAFEERAQVVHREHGEQ 252          
BLAST of Gvermi6604.t1 vs. uniprot
Match: A0A7S3A3G5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3G5_9RHOD)

HSP 1 Score: 144 bits (364), Expect = 1.610e-39
Identity = 70/144 (48.61%), Postives = 100/144 (69.44%), Query Frame = 0
Query:   72 RNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFE--PVGDITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRCVAKY 213
            + H E R+V F+PEQ+Y VV NVDEY +FVPWCT SR+    +     A L VGF +LSE+YTS++T++P +SV A+V N+ LF +L+ +W F+  P    T L+F + F F+N MYQ +++IFF++V  +MV AFE RC+ KY
Sbjct:   75 KKHLERRLVNFSPEQVYEVVKNVDEYKDFVPWCTDSRIISS-NGSCFQAKLGVGFNLLSEQYTSLVTVEPQKSVRAEVQNNPLFQFLVNEWLFKQGPREGTTWLEFLIAFQFKNQMYQGLSSIFFDQVASKMVQAFEQRCMEKY 217          
BLAST of Gvermi6604.t1 vs. uniprot
Match: A0A5J4Z647_PORPP (Coenzyme Q-binding protein COQ10-like, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z647_PORPP)

HSP 1 Score: 145 bits (366), Expect = 2.500e-39
Identity = 74/152 (48.68%), Postives = 100/152 (65.79%), Query Frame = 0
Query:   71 SRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDE-HHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFEPVGDITK--LKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRCVAKYHGAERH 219
            +R H E R+VPF+P++LYRVV +V +Y  FVPWC  S V R  +  H + A L VGFRV SE+YTSVI   P  SV     NSSLF +L+ +W F+P  D     L F V+F F+N +YQ  +N+FF+EV K+MV +FENRC+  Y+ + R+
Sbjct:  107 ARKHHERRLVPFSPDELYRVVLDVGQYKNFVPWCVESHVIRADETTHEMEAKLKVGFRVFSEEYTSVINYVPRSSVRVRAVNSSLFKHLVNEWRFKPGPDKHSAWLDFMVDFQFKNTLYQGASNLFFDEVCKKMVESFENRCMDLYNRSTRY 258          
BLAST of Gvermi6604.t1 vs. uniprot
Match: M2W1K8_GALSU (Polyketide_cyc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1K8_GALSU)

HSP 1 Score: 140 bits (354), Expect = 7.020e-38
Identity = 73/140 (52.14%), Postives = 96/140 (68.57%), Query Frame = 0
Query:   71 SRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFEPVGD--ITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENR 208
            +R H E R+VPFT E L+ VV NVDEY  FVPWC  SRV  +   + + A+L VGF++LSEKY S I L+P  S+    P + LF+YLI +W F+P  D   T L+FYV F FR+ +YQ + ++FFE+VVK+MV AFENR
Sbjct:   77 ARTHFERRLVPFTREHLFEVVKNVDEYKYFVPWCEDSRVFYK-KGNEMEAELTVGFKILSEKYISHIVLEPPCSIRVKSPETRLFEYLINEWYFKPGPDPHSTWLEFYVSFKFRSFLYQHIVDMFFEDVVKKMVTAFENR 215          
BLAST of Gvermi6604.t1 vs. uniprot
Match: M1V6C8_CYAM1 (Polyketide_cyc domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6C8_CYAM1)

HSP 1 Score: 142 bits (357), Expect = 1.160e-37
Identity = 82/191 (42.93%), Postives = 116/191 (60.73%), Query Frame = 0
Query:   25 PIRPAASLITKPLTP--LTPSIITRPADSFVPTPKRSNSSTPRTRSPH---SRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFEPVGDITK--LKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENR 208
            P+R A   I   L P  L  S++    D F      + S  PR RS     SR+ SE ++VPF+  +LY VVA+V+ Y EFVPWCTSSRV +R  E  + A+L VGF++  EKY S++ L+P R+V A    S LF++L+ +W F P  +  +  + FYV+F FR+P+YQ   ++FF EV ++MV AFE R
Sbjct:   82 PLRTAYVTIFSRLEPDGLPFSVLGSKRDFFGKLRSATVSEAPRDRSTQTALSRSFSESKLVPFSAHELYSVVADVERYHEFVPWCTSSRVIQRYGERLLEAELKVGFQLFHEKYISLVRLEPDRAVRATATTSQLFEHLVNEWRFRPGKNPNESWVDFYVDFRFRSPVYQAAVDLFFNEVARKMVRAFEER 272          
BLAST of Gvermi6604.t1 vs. uniprot
Match: D5ACH1_PICSI (Polyketide_cyc domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ACH1_PICSI)

HSP 1 Score: 138 bits (348), Expect = 1.010e-36
Identity = 67/145 (46.21%), Postives = 96/145 (66.21%), Query Frame = 0
Query:   71 SRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFE--PVGDITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRCVAKY 213
            ++ + E+RI+ ++PEQL+ VVA VD Y +FVPWC  S + RR ++    A+L +GF+ L E+Y S + LK  R +   V  SSLFDYLI  W F   P+G    L F+V+F FR+P+Y++V N+FF+EVV Q+V +FE RC   Y
Sbjct:  101 AKTYEEKRIIGYSPEQLFAVVAAVDLYEDFVPWCQRSAILRRKNDEAFDAELEIGFKFLVERYMSHVELKKPRYLKTTVSESSLFDYLINIWEFNDGPIGGTCDLHFFVDFQFRSPLYRQVANMFFKEVVSQLVHSFEQRCHTVY 245          
BLAST of Gvermi6604.t1 vs. uniprot
Match: UPI0004012DD6 (type II toxin-antitoxin system RatA family toxin n=2 Tax=Nisaea TaxID=390876 RepID=UPI0004012DD6)

HSP 1 Score: 133 bits (335), Expect = 3.700e-36
Identity = 60/140 (42.86%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   74 HSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFEPVGDITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRCVAKY 213
            H+E+R+VPFTPEQLY ++A++  Y EF+PWC  +R+ +R D   I+ADL +G++++ E++TS +TL P ++          F YL   W FEP  +   + FYV+F FR+ M Q++  +FF E V++MVGAFE R    Y
Sbjct:    4 HAEQRVVPFTPEQLYDLIADIQRYPEFLPWCVGARIRKR-DGSRIVADLVIGYKLIRERFTSTVTLSPEQNRIDVEYTDGPFKYLNNHWVFEPHPEGCMIDFYVDFEFRSKMLQKIIEVFFNEAVRRMVGAFEARAHELY 142          
BLAST of Gvermi6604.t1 vs. uniprot
Match: A0A1Y1IGW3_KLENI (Polyketide_cyc domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IGW3_KLENI)

HSP 1 Score: 134 bits (337), Expect = 4.620e-36
Identity = 68/149 (45.64%), Postives = 95/149 (63.76%), Query Frame = 0
Query:   70 HSRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDE---HHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFE--PVGDITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRCVAKY 213
            H+R+H EER++ + P+QL+ VVA VD Y +FVPWC  S +  R  E     + A+L VGF++ +E YTS +T +  R V + V  S+LF+YL   W F   P  + T LKF V+F FR+P+Y RV N+FF+EV  +MV +FE RC   Y
Sbjct:   14 HARHHQEERVIGYPPDQLFDVVAAVDFYEDFVPWCQRSEILIRKQEGPVEEVEAELEVGFKIFTESYTSHVTQERPRYVRSTVSGSNLFEYLDCLWEFNSGPTPNKTALKFRVDFQFRSPLYHRVANLFFDEVAARMVSSFERRCEQVY 162          
BLAST of Gvermi6604.t1 vs. uniprot
Match: A0A1D2A1N7_AUXPR (Polyketide_cyc domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A1N7_AUXPR)

HSP 1 Score: 134 bits (338), Expect = 1.360e-35
Identity = 62/145 (42.76%), Postives = 99/145 (68.28%), Query Frame = 0
Query:   71 SRNHSEERIVPFTPEQLYRVVANVDEYSEFVPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVPNSSLFDYLITDWTFEPVGD--ITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQMVGAFENRCVAKY 213
            S+   E++++P+TPE++Y VVA V+ Y EFVPWC  S +T R   +++ A+L VGF++ +E+Y S +TL P +++ + V +S+LF YL  +W F P      T+L F V+FAF++ +Y+ + N+FF EVV++M+GA E RC   Y
Sbjct:   62 SKKFHEQKVLPYTPEEIYDVVAAVEHYHEFVPWCVRSVITARRPPNYLEAELEVGFQMFTERYISRVTLHPGQAISSSVGDSTLFRYLNNEWRFAPGPHPGSTRLDFSVDFAFKSALYRHLANVFFAEVVQRMMGALEGRCTLLY 206          
The following BLAST results are available for this feature:
BLAST of Gvermi6604.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1E03D24.320e-6460.82coenzyme Q-binding protein COQ10 homolog, mitochon... [more]
A0A7J7INZ2_9RHOD1.190e-3946.20Coenzyme Q-binding protein coq10, mitochondrial n=... [more]
A0A7S3A3G5_9RHOD1.610e-3948.61Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z647_PORPP2.500e-3948.68Coenzyme Q-binding protein COQ10-like, mitochondri... [more]
M2W1K8_GALSU7.020e-3852.14Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
M1V6C8_CYAM11.160e-3742.93Polyketide_cyc domain-containing protein n=1 Tax=C... [more]
D5ACH1_PICSI1.010e-3646.21Polyketide_cyc domain-containing protein n=1 Tax=P... [more]
UPI0004012DD63.700e-3642.86type II toxin-antitoxin system RatA family toxin n... [more]
A0A1Y1IGW3_KLENI4.620e-3645.64Polyketide_cyc domain-containing protein n=1 Tax=K... [more]
A0A1D2A1N7_AUXPR1.360e-3542.76Polyketide_cyc domain-containing protein n=2 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 71..214
e-value: 9.7E-47
score: 160.5
IPR005031Coenzyme Q-binding protein COQ10, START domainPFAMPF03364Polyketide_cyccoord: 80..206
e-value: 9.5E-25
score: 87.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..76
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 74..213
IPR044996Coenzyme Q-binding protein COQ10-likePANTHERPTHR12901SPERM PROTEIN HOMOLOGcoord: 45..216
IPR044996Coenzyme Q-binding protein COQ10-likeCDDcd07813COQ10p_likecoord: 74..209
e-value: 5.92045E-54
score: 167.649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1520118..1520795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6604.t1Gvermi6604.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1520118..1520795 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6604.t1 ID=Gvermi6604.t1|Name=Gvermi6604.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=226bp
MTVRTTTWIRSSWRQFSSHSKVVHPIRPAASLITKPLTPLTPSIITRPAD
SFVPTPKRSNSSTPRTRSPHSRNHSEERIVPFTPEQLYRVVANVDEYSEF
VPWCTSSRVTRRIDEHHIIADLAVGFRVLSEKYTSVITLKPYRSVCADVP
NSSLFDYLITDWTFEPVGDITKLKFYVEFAFRNPMYQRVTNIFFEEVVKQ
MVGAFENRCVAKYHGAERHGILHRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR005031COQ10_START
IPR044996COQ10-like