Gvermi6586.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6586.t1
Unique NameGvermi6586.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length179
Homology
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A2V3IXK8_9FLOR (Putative plastid-lipid-associated protein 4, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK8_9FLOR)

HSP 1 Score: 260 bits (665), Expect = 5.670e-86
Identity = 128/178 (71.91%), Postives = 149/178 (83.71%), Query Frame = 0
Query:    1 MSVQAPSGVKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVLVKK 178
            MSV AP+  K+ALL+ V PLNFGRDV ++P +Q +I+ L RQVEATN SLSPGTDPNLSGVWD VYTTS+SIL    PGFLQS RIVQEINA  LKGRN ET++FGPL+  NAVNFEL  +S KRF+VNF++FV+ N +R+NVREN RFTGWLEVTYLDEDLRISRGN GNLF+L+KK
Sbjct:   37 MSVTAPNTFKQALLEKVHPLNFGRDVADNPAEQLDIEQLARQVEATNKSLSPGTDPNLSGVWDMVYTTSKSILATGSPGFLQSRRIVQEINAAVLKGRNSETFRFGPLQFDNAVNFELNPASEKRFDVNFVEFVLLNFIRVNVRENMRFTGWLEVTYLDEDLRISRGNAGNLFILIKK 214          
BLAST of Gvermi6586.t1 vs. uniprot
Match: UPI001CC69F2D (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC69F2D)

HSP 1 Score: 126 bits (317), Expect = 7.120e-33
Identity = 69/167 (41.32%), Postives = 105/167 (62.87%), Query Frame = 0
Query:    9 VKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            +K+ LL+ + PL+ G +    P+ Q+E+D + RQ+E  N +  P     L+G W+ +YTTSRSIL  ++P FL+SS   Q IN + L+ +N+E++ F      N V  +LT  +P++  V F  F +  L+ I   E  RF G LE+TYLD++LRISRG++GNLF+L
Sbjct:   80 LKDELLETIAPLDRGANA--SPEDQQEVDQIARQLEVVNPTKEPLKSDLLNGKWELIYTTSRSILQTERPKFLRSSVNYQAINVDTLRAQNMESWPF-----FNQVTADLTPLNPRKVAVKFDYFKILGLIPIKAPERARF-GELEITYLDDELRISRGDKGNLFIL 238          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A7C9DQZ2_OPUST (PAP_fibrillin domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DQZ2_OPUST)

HSP 1 Score: 123 bits (308), Expect = 1.490e-31
Identity = 69/167 (41.32%), Postives = 101/167 (60.48%), Query Frame = 0
Query:    9 VKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            +KE LL  + PL+ G D    P+ Q+ ID L R++EA N +  P     L+G W+ +YTTS+SIL  ++P FL+S    Q IN + L+ +N+ET+ F      N V  +LT  + ++  V F  F +  L+ +   E  R  G LE+TYLDEDLR+SRG++GNLF+L
Sbjct:   76 IKEELLQAIEPLDRGADAT--PEDQQRIDQLTRKLEAVNPTKEPLKSDLLNGKWELIYTTSKSILQTERPKFLRSRVNYQAINLDTLRAQNMETWPF-----FNQVTADLTPLNSRKVAVKFDYFKILGLIPVKAPETAR--GSLEITYLDEDLRVSRGDKGNLFIL 233          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A1Q3AZQ2_CEPFO (PAP_fibrillin domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AZQ2_CEPFO)

HSP 1 Score: 122 bits (305), Expect = 5.070e-31
Identity = 68/167 (40.72%), Postives = 101/167 (60.48%), Query Frame = 0
Query:    9 VKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            +KE LL  + PL+ G D    P+ Q+ +D + R++EA N +  P     L+G W+ +YTTS+SIL   +P FL+SS+  Q IN + L+ +N+E++ F      N V  +LT  +  +  V F  F +  L+ +   E  R  G LE+TYLDEDLRISRG++GNLF+L
Sbjct:   87 IKEELLQAIAPLDRGADAT--PEDQQRVDQIARKLEAVNPTKEPLKSDLLNGKWELIYTTSQSILQNQRPKFLRSSKNFQAINTDTLRAQNMESWPF-----FNQVTADLTPLNSNKVAVKFDYFKIAGLIPVKAPERAR--GELEITYLDEDLRISRGDKGNLFIL 244          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A5B7B516_DAVIN (PAP_fibrillin domain-containing protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7B516_DAVIN)

HSP 1 Score: 121 bits (304), Expect = 6.190e-31
Identity = 69/170 (40.59%), Postives = 104/170 (61.18%), Query Frame = 0
Query:    6 PSGVKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            P  +KE LL+ + PL+ G D    P+ Q+ ID + R++EA N + +P     L+G W+ +YTTSRSIL   +P FL+S    Q INA+ L+ +N+E++ F      N V  +LT  + ++  V F  F +  L  I ++   R  G LE+TYLDE+LR+SRG++GNLF+L
Sbjct:   78 PKPIKEELLEAIAPLDRGADAT--PEDQQRIDQIARKLEAVNPTKNPLKSDLLNGKWELIYTTSRSILQTQRPKFLRSRTNFQAINADTLRAQNMESWPF-----FNQVTADLTPLNARKVAVKFDFFKIAGL--IPIKAPGRAHGELEITYLDEELRVSRGDKGNLFIL 238          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A1U7ZG20_NELNU (probable plastid-lipid-associated protein 4, chloroplastic isoform X3 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZG20_NELNU)

HSP 1 Score: 120 bits (302), Expect = 1.380e-30
Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 0
Query:    8 GVKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQ-SSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            G+KE LL+ + PL+ G +    P+ Q  +D + R++EA N    P     LSG W+ +YTTS+SIL A +P FL+ + +I Q IN + L+ +N+ET+ F      N     L   + KR  V F  F + +++ I  R + R  G LE+TYLDE+LRISRGNEGNLF+L
Sbjct:   84 GLKEELLETIAPLDRGAEAT--PEAQARVDQVARKLEAVNEIKEPLKSNLLSGKWELLYTTSKSILKAQRPKFLRPNGKIYQAINVDTLRAQNMETWPF-----FNQATANLVPINAKRVAVKFDSFKIASVVPIKARGSGR--GQLEITYLDEELRISRGNEGNLFIL 243          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A218X3V7_PUNGR (probable plastid-lipid-associated protein 4, chloroplastic n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218X3V7_PUNGR)

HSP 1 Score: 120 bits (301), Expect = 1.950e-30
Identity = 66/167 (39.52%), Postives = 103/167 (61.68%), Query Frame = 0
Query:    9 VKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            +KE LLD + PL+ G +    P+ Q+ +D++ R++EA N +  P   P L+G W+ +YTTS+SIL   +P FL+S+   Q IN + L+ +N+E++ F      N V  +LT  + ++  V F  F +  L+ I      R  G LE+TYLDE+LR+SRG++GNLF+L
Sbjct:   80 LKEELLDAIAPLDRGAEAT--PEDQQRVDEMARRLEAANPTKEPLKSPLLNGKWELIYTTSQSILQTQRPKFLRSTTNYQGINVDTLRAQNMESWPF-----FNQVTADLTPLNSRKVAVKFDYFKIAGLIPIKAPGRAR--GELEITYLDEELRVSRGDKGNLFIL 237          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A251UMX5_HELAN (Putative plastid-lipid associated protein PAP / fibrillin family protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UMX5_HELAN)

HSP 1 Score: 120 bits (300), Expect = 2.070e-30
Identity = 67/169 (39.64%), Postives = 103/169 (60.95%), Query Frame = 0
Query:    7 SGVKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            S +K+ LLD + PL+ G +    P+ Q+ I+ +VR++EA N +  P   P L G W+ +YTTS+SIL   +P FL+S    Q INA+ L+ +N+E++        N V  +LT  + ++  V F  F +  L+ +   +  R  G LE+TYLDE+LR+SRG++GNLFVL
Sbjct:   72 SSIKQELLDAIAPLDRGAEA--SPEDQEAIEQIVRKLEAANPTKEPLKSPFLDGKWELIYTTSQSILQTKRPKFLRSRVNYQAINADTLRAQNMESFP-----TFNQVTADLTPVNSRKVAVKFDYFKILGLIPVKAPDTAR--GSLEITYLDEELRVSRGDKGNLFVL 231          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A328D570_9ASTE (PAP_fibrillin domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328D570_9ASTE)

HSP 1 Score: 120 bits (300), Expect = 2.880e-30
Identity = 69/166 (41.57%), Postives = 102/166 (61.45%), Query Frame = 0
Query:   10 KEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            KE LL+ + PL+ G D    P+ Q +I+ +VR++EA N +  P   P L+G W+ +YTTS+SIL  +KP FL+S R  Q IN + L+ +N+E+         N V  +LT  + ++  V F  F +  L+ I   E  R  G LE+TYLDE+LR+SRG++GNLF+L
Sbjct:   89 KEELLEAIAPLDRGADA--SPEDQDQIEQVVRKLEAANPTKQPLKSPLLNGKWELLYTTSQSILQTNKPKFLRSRRNYQGINTDTLRAQNMES-----CPTFNQVTADLTPINSRKVAVKFDYFKIAGLIPIKAPETAR--GSLEITYLDEELRVSRGDKGNLFIL 245          
BLAST of Gvermi6586.t1 vs. uniprot
Match: A0A7N0RH08_KALFE (PAP_fibrillin domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RH08_KALFE)

HSP 1 Score: 119 bits (299), Expect = 3.870e-30
Identity = 68/167 (40.72%), Postives = 99/167 (59.28%), Query Frame = 0
Query:    9 VKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSLSPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNVETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFTGWLEVTYLDEDLRISRGNEGNLFVL 175
            +KE LL+ + PL+ G +    P+ Q+ ID L R++EA N    P     L+G W+ +YTTS SIL  ++P FL+S    Q IN + L+ +N E++ F      N V  +LT  SP +  V F  F +  L+ +   +  R  G L++TYLDEDLRISRG++GNLF+L
Sbjct:   85 LKEELLEAIAPLDRGAEAT--PEDQERIDQLARKLEAANRVKEPLKSDLLNGKWELIYTTSTSILQRERPKFLRSRTNYQAINVDTLRAQNQESFPF-----FNQVTADLTPLSPSKVAVKFDYFKILGLIPVKAPDRAR--GELDITYLDEDLRISRGDKGNLFIL 242          
The following BLAST results are available for this feature:
BLAST of Gvermi6586.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXK8_9FLOR5.670e-8671.91Putative plastid-lipid-associated protein 4, chlor... [more]
UPI001CC69F2D7.120e-3341.32probable plastid-lipid-associated protein 4, chlor... [more]
A0A7C9DQZ2_OPUST1.490e-3141.32PAP_fibrillin domain-containing protein n=2 Tax=Op... [more]
A0A1Q3AZQ2_CEPFO5.070e-3140.72PAP_fibrillin domain-containing protein n=1 Tax=Ce... [more]
A0A5B7B516_DAVIN6.190e-3140.59PAP_fibrillin domain-containing protein n=1 Tax=Da... [more]
A0A1U7ZG20_NELNU1.380e-3042.01probable plastid-lipid-associated protein 4, chlor... [more]
A0A218X3V7_PUNGR1.950e-3039.52probable plastid-lipid-associated protein 4, chlor... [more]
A0A251UMX5_HELAN2.070e-3039.64Putative plastid-lipid associated protein PAP / fi... [more]
A0A328D570_9ASTE2.880e-3041.57PAP_fibrillin domain-containing protein n=3 Tax=Cu... [more]
A0A7N0RH08_KALFE3.870e-3040.72PAP_fibrillin domain-containing protein n=1 Tax=Ka... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 9..175
e-value: 2.5E-29
score: 102.6
NoneNo IPR availablePANTHERPTHR31906:SF14PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATEDcoord: 8..175
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 8..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1426381..1426917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6586.t1Gvermi6586.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1426381..1426917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6586.t1 ID=Gvermi6586.t1|Name=Gvermi6586.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=179bp
MSVQAPSGVKEALLDLVMPLNFGRDVVNDPDKQKEIDDLVRQVEATNTSL
SPGTDPNLSGVWDTVYTTSRSILGADKPGFLQSSRIVQEINAEELKGRNV
ETYKFGPLEILNAVNFELTASSPKRFEVNFIQFVVFNLLRINVRENKRFT
GWLEVTYLDEDLRISRGNEGNLFVLVKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP