Gvermi6553.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6553.t1
Unique NameGvermi6553.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length599
Homology
BLAST of Gvermi6553.t1 vs. uniprot
Match: A0A2V3IHA7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHA7_9FLOR)

HSP 1 Score: 398 bits (1022), Expect = 7.950e-128
Identity = 274/628 (43.63%), Postives = 374/628 (59.55%), Query Frame = 0
Query:    1 MNSNRPTRASNRKRRPSPSISSPVDDDDNAKNEAQDESGSTDIADDLLVEPGGKDLEDWSRDVDEEDDVTLEQLLLDDGEXXXXALVDDELLLNGDFQEDPEDLAINDVFDDVXXXXXXXXXXXXXXXXXXXSDGFEEDD---------ELAAQXXXXXXXX-EVSIPAGRKRKQRTVTKARGVSSKVPEDEENVEPSEDVLDSIRDGFQPVFEPKDVDGDDSNADLTSISDKDLNDDSEEQNAEDIRNAANILSKSGILGLGFEAEEQGAISAPQTSS--------STDDSKLKGDEEYDLENLYDFEDETEIEGNEESEFDSIEARERKQRQVDAEFALTSESSFGKVWELNEDTYVTITDPGQAYAYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSENLPVGSKEYIARRSYELLSKFSPAEMFQWTRRHGPPPKDIEDLYPKRKPKLTALGKQILTLSPPGSTHT--------EDPQASQESGDGGKRRRNKASGKTNRSKVNSAMIRVSENSPSSGRSSKNKKSPEH----ERAALDRSMEFPCLFKFKIEPCEEGFQCQIQPIVENALKRDVEQLSFSVEKEGKLERIEFSVIVENSKEITDIFEAFHGDERVKRSYG 598
            MN+ R  R SN K    PS  S +  D+N     + ESG  ++   LL  P  + LE WS    +E DV +E LLL + E     L D+E+LL+GDF ED  DL + DVF++                X   ++G +E           ELAAQ         E+ IP  +KR+ R+ +++  V+    ++++N++ SEDVLD + DGF+PVFE  D   D+ +A LT++ D+   ++ +E++AEDIRNAANILSKSGILG+G    E   IS  Q +S        +T +++L GD+  D E L  FED+ E E  EE      +  E      D E+ LT+ESS G+VWELNEDTYVTIT+PG+AY YELDE+DEEDQEMSTVRRGKQGGWSGGLASYP S +LPVGSKE+IARRSYEL+++ S  +MF+WT+RH   P  I+ LYP  +P+   LGKQIL LS P ++ +        E+  A++E G     R      +     V  A I V   + S     K ++  E     +R+A+DRSM FP ++KFKIE   EGF   +Q IV+N L RD+E L  +VE+ G+ +R+EF++ +ENSKEITD+F+A   D R+KRSYG
Sbjct:   16 MNTKRRPRTSNGKSESEPSRPSAIS-DENLSGVQEIESGEQEV---LLAGPENEALEGWSPVAADEGDVPIEALLLGEDEAEE-TLDDEEILLDGDFDEDSGDLNVEDVFEE------------DDEAXDDEAEGIDEXXXXXXXXXXXELAAQASSGDFDEDEIPIPGVQKRRVRSSSRSGTVTLDDIDEDDNIDSSEDVLDPLADGFEPVFEVGDSGRDEPSASLTTVKDEQRTEEFDEESAEDIRNAANILSKSGILGIGLGEAETDDISQSQANSVALSDNDSTTVNAELSGDD-LDFEKLLSFEDKPETEEKEEVVDKEPDEVEDIDADYDDEYTLTTESSVGRVWELNEDTYVTITEPGEAYPYELDEEDEEDQEMSTVRRGKQGGWSGGLASYPASSDLPVGSKEWIARRSYELIAESSAVDMFRWTKRHLTAPPLIDGLYPDERPEPVPLGKQILKLSTPETSASVTGTGLFQENLSATEEEGTMAPMRGEAQDDEGLEDYV--AEILVEPGNGSGPEDEKKRRGVEDAFEKDRSAMDRSMTFPYVYKFKIEGSGEGFPECVQDIVKNTLGRDIEDLPLAVERSGRYDRVEFNLTLENSKEITDLFDALRTDARIKRSYG 623          
BLAST of Gvermi6553.t1 vs. uniprot
Match: R7QM30_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM30_CHOCR)

HSP 1 Score: 200 bits (509), Expect = 7.260e-53
Identity = 191/593 (32.21%), Postives = 305/593 (51.43%), Query Frame = 0
Query:   40 STDIADDLLVEPGGKDLEDWS----RDV-----DEEDDVTLEQLLLDDGEXXXXALVDDELLLNGDFQEDPEDLAINDVFDDVXXXXXXXXXXXXXXXXXXXSDGFEEDDELAAQXXXXXXXXEVSIPAGRKRKQRTVTKAR--GVSSKVP-EDEENVEPSEDVLDSIRDGFQPVFEPKDVDGDDSNADLTSISDKDLNDDSEEQNAEDIRNAANILSKSGILGLGFEAEEQ-----------GAISAPQTSSSTDDSKLKGDEEYDLE-NLYDFEDETEIEGNEESEFDSIEARERKQRQVDAE--------FALTSESSFGKVWELNEDTYVTITDPGQAYAYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSENLPVGSKEYIARRSYELLSKFSPAEMFQWTRRHGPPPKDIEDLYPKRKPKLTALGKQILTLSPPGSTHTEDPQASQESGDGGKRRRNKASGKTNRSKVNSAMIRVSENSPSSGRSSKNKKSPEHERA--ALDRSMEFPCLFKFKIEPCEEGFQCQIQPIVENALKRDVEQLSFSVEKEGKLERIEFSVIVENSKEITDIFEAFHGDERVKRSYG 598
            S++  D LL++P  ++  +W+    RDV     DE D+  ++ + +DDG      +++DE        +D E++ +  V ++V    XXXXXXXXXXXXXXX        ELAAQ        ++ I    KR  R  T +R  G  + V  +D +++  ++++L++I D   P+F+      ++    +  + D++L  + +E++ EDIR+AA+ILS SG+LGLG E  ++           G +  P    +     L   E+YD E  L D +DE +               +  +  +DA+          LTS+SS G++WELN+D YVTIT+PGQAYAYELDE+      MST+RRGKQGGWSGGLASY ++ ++P GS E++ARR+YEL+++ +  EMFQWTRRH  PP  I+ LYP   P    + +  L  S P                                 ++++++    +S    +  K   +PE      ALDR++ FPC +KFK+E   +     +    E  L R V   +  V+  G+ +R+E  V V +++++T++++    +  VK S+G
Sbjct:   74 SSNEKDSLLIDPDDREFVEWASTAERDVPTELPDEADEDIIDLVTIDDG--PAPPILEDE--------QDNEEVELEIVGENVDDEDXXXXXXXXXXXXXXXXX------ELAAQADAEDYEDDIPIATLSKRGGRISTGSRMSGPLAAVDVDDNDDIXXADEILETIDDDIPPIFDGPAALEEEVRPAIDGV-DEELFVEVDEESEEDIRSAADILSNSGLLGLGVEGGKRADMSEVTSFAMGGVEGPARPPA-----LAQPEQYDDEVALLDVDDE-DXXXXXXXXXXXXXXXQSLESYMDADXXXXXXXXIPLTSKSSSGRIWELNDDNYVTITEPGQAYAYELDEEXXXXXXMSTMRRGKQGGWSGGLASY-SARDMPEGSPEWVARRAYELVAESNQVEMFQWTRRHRGPPPIIDKLYPADPPPPPRIPRTRLQFSTPD--------------------------------IDASIVGTDSSSVEDEQGRKRTPAPEKVEGSHALDRAVNFPCQYKFKVEGSGDDLIDALIADTEKILGRPVPDSAVHVQPAGRYKRVEIMVEVTSARQVTNLYDTLRNNSGVKYSFG 610          
BLAST of Gvermi6553.t1 vs. uniprot
Match: A0A1X6NLQ4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLQ4_PORUM)

HSP 1 Score: 92.8 bits (229), Expect = 4.930e-16
Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 0
Query:  320 EFALTSESSFGKVWELNEDTYVTITDPGQAYAY---ELDEDDEEDQ--------EMSTVRRGKQGGWSGGLASYPTSEN----LPVGSKEYIARRSYELLSKFSPAEMFQWTRRHGPPPKDIEDLYPKRKPKLTALGKQILTL 447
            EF +T ++SFG+VW LN+D YVTIT+PG+ +A+   ++   DEED         E    RR      +   +++P +      + VGSKE+ AR +YE  +   P EM++W+R+H  PP  +E+L+P    +L  L +  L +
Sbjct:  301 EFGVTQDTSFGRVWALNDDNYVTITEPGEGFAFGDADVAATDEEDNGGGSNALHEHDATRRATPAWGASTASAWPAAMGGGVAMDVGSKEWAARAAYERCTSAPPVEMYRWSRKHSTPPAGMEELFPYEAAELPKLARLTLEI 443          
The following BLAST results are available for this feature:
BLAST of Gvermi6553.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IHA7_9FLOR7.950e-12843.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QM30_CHOCR7.260e-5332.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NLQ4_PORUM4.930e-1634.97Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007454Uncharacterised protein family UPF0250PFAMPF04359DUF493coord: 518..594
e-value: 3.5E-5
score: 24.3
NoneNo IPR availableGENE3D3.30.70.260coord: 512..595
e-value: 4.7E-6
score: 28.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..435
IPR027471YbeD-like domain superfamilySUPERFAMILY117991YbeD/HP0495-likecoord: 515..594

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1317599..1319395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6553.t1Gvermi6553.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1317599..1319395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6553.t1 ID=Gvermi6553.t1|Name=Gvermi6553.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=599bp
MNSNRPTRASNRKRRPSPSISSPVDDDDNAKNEAQDESGSTDIADDLLVE
PGGKDLEDWSRDVDEEDDVTLEQLLLDDGEEEDEALVDDELLLNGDFQED
PEDLAINDVFDDVDDDEEDEEDEDEDEDEDEDSDGFEEDDELAAQADGDG
FDEEVSIPAGRKRKQRTVTKARGVSSKVPEDEENVEPSEDVLDSIRDGFQ
PVFEPKDVDGDDSNADLTSISDKDLNDDSEEQNAEDIRNAANILSKSGIL
GLGFEAEEQGAISAPQTSSSTDDSKLKGDEEYDLENLYDFEDETEIEGNE
ESEFDSIEARERKQRQVDAEFALTSESSFGKVWELNEDTYVTITDPGQAY
AYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSENLPVGSKEYIARRS
YELLSKFSPAEMFQWTRRHGPPPKDIEDLYPKRKPKLTALGKQILTLSPP
GSTHTEDPQASQESGDGGKRRRNKASGKTNRSKVNSAMIRVSENSPSSGR
SSKNKKSPEHERAALDRSMEFPCLFKFKIEPCEEGFQCQIQPIVENALKR
DVEQLSFSVEKEGKLERIEFSVIVENSKEITDIFEAFHGDERVKRSYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007454UPF0250
IPR027471YbeD-like_sf