Gvermi6549.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A2V3IH59_9FLOR (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH59_9FLOR) HSP 1 Score: 254 bits (649), Expect = 6.330e-80 Identity = 135/266 (50.75%), Postives = 174/266 (65.41%), Query Frame = 0
Query: 48 AMDSSSKPVSYPSGKAKDETRVFVDSLFRQGDVVELPHEEQKHLRARRFRSGDKLVLFNSVGQTAASEYQNQKVLILEVS-GSGQKDHNLSHLIAIPRKPSRADWLVEKLTELGADSITFMQTNRTVVADPSPNKLHRWRRIAVSASKQSMRDSTPEILVVDFEAAIQRVSQHPLPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAICQFFYGGTFQDERRKRRSR 312
A+DSSS ++YP+GK K +TRVF+D FR G+V+ LP EE KHLRA RF++GD+ VLFN G +A + QN+ ++LE + S LIA+P+ SR+D +VEKLTELGAD ITFM+T RT+ PS NKL RW RIA++ASKQS+RD PEI +DF +A++ V HPLP LL G LLSS RE+ L +VGPEGGFE E L +AGA +SLG RLR ETAAI S A I Q Y +++ +S+
Sbjct: 50 AVDSSSDSLAYPTGKRKSDTRVFLDIGFRTGEVISLPQEEFKHLRALRFKNGDEFVLFNGAGDSATAALQNKTAVVLEARYKTTHLKAQFSALIAVPKTGSRSDSIVEKLTELGADCITFMRTKRTIATMPSANKLERWNRIAIAASKQSLRDVPPEIAAIDFSSALETVVLHPLPFLLCSMGDLLLSSSCQTRIRREKQALVIVGPEGGFEMSEARQLTEAGAIPVSLGSNRLRIETAAIVSVALISQILYTTMIREDEASNKSK 315
BLAST of Gvermi6549.t1 vs. uniprot
Match: R7QLU6_CHOCR (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLU6_CHOCR) HSP 1 Score: 176 bits (447), Expect = 9.530e-50 Identity = 100/248 (40.32%), Postives = 141/248 (56.85%), Query Frame = 0
Query: 52 SSKPV--SYPSGKAKDETRVFVDSLFRQGDVVELPHEEQKHLRARRFRSGDKLVLFNSVGQTAASEYQNQK-VLILEVSGSGQKDHNLSHLIAIPRKPSRADWLVEKLTELGADSITFMQTNRTVVADPSPNKLHRWRRIAVSASKQSMRDSTPEILVV-DFEAAIQRVSQHPLPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAICQ 295
+++PV SY GKA TRVF+ F G LP EE HLRARR R G ++ LF+ G A + ++ V +L + + + ++ +IA+P+ PSRAD +VEKL ELG + + +T R + A P+ +L RW R+AV+ASKQSMR P + ++ ++ SQ L LLLS G P+L + R++ LVGPEGGF D E L+ GA +I LG RLR ETAA + A + Q
Sbjct: 29 TTRPVIASYTRGKATSSTRVFLSGPFHPGAEYTLPPEEAAHLRARRIRHGSQITLFDGTGAFATATLDSESSVTVLTTTSAEARSKSICAIIALPKSPSRADGIVEKLVELGVHRLVWARTERVIAAAPNQARLARWARLAVAASKQSMRTDVPIVQTTSNWGELLELASQSDLVLLLSAAGTPILGQRCTDAVRAARNIAVLVGPEGGFTDTEEEKLEAVGALKIGLGSNRLRVETAAFTAVAVLMQ 276
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A378U1R7_NEIEL (Ribosomal RNA small subunit methyltransferase E n=13 Tax=Neisseria TaxID=482 RepID=A0A378U1R7_NEIEL) HSP 1 Score: 117 bits (294), Expect = 6.240e-28 Identity = 79/235 (33.62%), Postives = 128/235 (54.47%), Query Frame = 0
Query: 68 RVFVDSLFRQGDVVELPHEEQKHLRARRFRSGDKLVLFNSVGQT--AASEYQNQKVLILEVSGSGQKDHNLS-HLIAIPRKPS--RADWLVEKLTELGADSITFMQTNRTVV---ADPSPNKLHRWRRIAVSASKQSMRDSTPEIL-VVDFEAAIQRVSQHPLPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAI 293
R F+ + G+ V LP + +HL R R G+++VLFN G + A +++ E+S S ++ H+ I S R D+ ++K ELG + I +++ R+VV + + ++ RW+ I +SA +QS R++ P + ++ F A+Q + LL+ N SC LN+ RSV+F+VGPEGG+ + E Q+AG +SLG LRTETAA+A+ AA+
Sbjct: 3 RFFLSAALHVGETVALPGDVVRHLNVLRCRIGEEIVLFNGDGLSYHAVLNSLDKRTAEAEISSSRPSENESPLHITLIQAVSSGERMDFTLQKSVELGVNEIIPVESARSVVKLSGERAEKRVSRWQEIVISACEQSGRNTVPAVRPLLPFRRALQNLPDAEAKLLMGLNR-----SCRLNSLPPPRSVVFMVGPEGGWTEEEERLAQEAGFQAVSLGRRVLRTETAALAAIAAM 232
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A2D8PR62_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PR62_9PROT) HSP 1 Score: 114 bits (286), Expect = 9.570e-27 Identity = 77/219 (35.16%), Postives = 120/219 (54.79%), Query Frame = 0
Query: 82 ELPHEEQKHL-RARRFRSGDKLVLFNSVGQTAASEY----QNQKVL-ILEVSGSGQKDHNLSHLIAIPRKPSRADWLVEKLTELGADSITFMQTNRTVVAD-PSPNKLHRWRRIAVSASKQSMRDSTPEILVVDFEAAIQRVSQHPLPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAI 293
+L +E ++L +A R G+K+ +F+ G A + + Q L + E + + DH L +A P K RADWLVEK+TE+GA + ++QT R+VV P K RW R+A SA++QS R P+I +++ +S+ L P+ + L + + ++GPEGGF DHE L+++G N + L + LRTETAAIA+AA +
Sbjct: 24 QLTKDESRYLLKALRLTEGEKIEVFDGQGFFALATLHRIDEGQPYLDVQEPQEAPKPDHELYLAVATP-KGDRADWLVEKITEIGASGLIWLQTERSVVTPKPGSKKFERWARLADSAARQSRRVRVPKI---QGPMSLEELSEQEFQNRLV--ASPIKTDNALPKGALQGRTVVVIGPEGGFTDHELEQLKNSGYNLLWLSPHILRTETAAIAAAAVL 236
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A2R4XIN6_9BURK (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Orrella marina TaxID=2163011 RepID=A0A2R4XIN6_9BURK) HSP 1 Score: 115 bits (287), Expect = 9.910e-27 Identity = 76/236 (32.20%), Postives = 120/236 (50.85%), Query Frame = 0
Query: 68 RVFVDSLFRQGDVVELPHEEQKHLRARRFRSGDKLVLFNSVGQTAASEYQ--NQKVLILEVSGSGQKDHNLSHLIAIPR---KPSRADWLVEKLTELGADSITFMQTNRTVV---ADPSPNKLHRWRRIAVSASKQSMRDSTPEILVV-DFEAAIQRVSQHP-LPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAI 293
R F D+ D +ELP + H+R RR R G+ +VLF+ G+ A + ++ + ++ S +S I + + + DW++EK TELG + +Q +R+VV +D + + RR+ SAS+Q R+ ++L+ + AI+ P L +LS PL S +L R + +GPEGG+ E N L AGA ISLG LRTETA +A+ +A+
Sbjct: 9 RFFCDTRLEHCDTIELPDDVAHHVRVRRLREGEPIVLFDGKGRQAEARISVISKSLCQAKIESSSLVSREISGKITLVQAMASQDKMDWIIEKATELGVTRMIAVQASRSVVKLNSDRASKRAAHGRRLIESASEQCGRNHLMQLLMPHSLKQAIEACKDQPMLACVLSEAALPLTSESLLETVRRHQGCSVFIGPEGGWAPDEQNELIKAGAVAISLGRRVLRTETAGLAAVSAL 244
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A7J7ILD3_9RHOD (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILD3_9RHOD) HSP 1 Score: 115 bits (289), Expect = 1.760e-26 Identity = 88/258 (34.11%), Postives = 132/258 (51.16%), Query Frame = 0
Query: 81 VELPHEEQKHLRARRFRSGDKLVLFNSVGQTAASEY--QNQKVLIL----------EVSGSGQKDHNLSHLIAIPRKPSRADWLVEKLTELGADSITFMQTNRTVVADPSPNKLH--RWRRIAVSASKQSMRDSTPEILVVDFEAAIQRVSQ-HPLP---------------------LLLSPNGKPLLSSC------VLNNAER---ERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAI 293
+ELP EQ+H+R+RR + G + LF+ G+ AA + + + V L EV S Q+ ++S ++A P+ RADW++EKL ELG + R V P K RW+ ++++A+KQS+R + + + D A + R++ P P LL P+ + L+S VL+ +ER R V+ +VGPEGG E +AL AGA +SLG RLRTETAA+A AAA+
Sbjct: 58 LELPPNEQQHVRSRRLKDGTMVELFDGSGRLAAGQLACRGRAVEALRWLPTDTGATEVP-SMQQVLSVSCVVATPKSTQRADWMIEKLNELGVSGYRHLACRRVEVDAPQIEKRAAVRWQHVSIAAAKQSLRRTLLDCGLADANATVTRMAHWFPSPVVTLEDLVRQMSVTASEDVVFLLAKPDARRTLASWRRAHSPVLSPSERWTSPRQVVCVVGPEGGLSSDEEDALLQAGAIGVSLGAQRLRTETAAVALAAAL 314
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A098U8W8_9BURK (Ribosomal RNA small subunit methyltransferase E n=5 Tax=Massilia TaxID=149698 RepID=A0A098U8W8_9BURK) HSP 1 Score: 111 bits (277), Expect = 1.940e-25 Identity = 84/231 (36.36%), Postives = 115/231 (49.78%), Query Frame = 0
Query: 78 GDVVELPHEEQKHLRARRFRSGDKLVLFNSVGQTAASEYQN--QKVLILEVSGSGQKDHNLSHLIAIPR---KPSRADWLVEKLTELGADSITFMQTNRTVV---ADPSPNKLHRWRRIAVSASKQSMRDSTPEILVVDFEAAIQRVSQHPLPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAICQFFYGG 300
G VV+LP HL R +SGD+LVLFN G A + ++ EV D L + + + + S+ DW+VEK ELGA + + R+VV D + +L W+ + VSAS+Q R+ ++ V S +LLSP L+ V A R V LVGPEGGF DHE +A + AGA +S+G LRTETA +A A AI +GG
Sbjct: 13 GSVVDLPEAVAHHLHVVRQQSGDELVLFNGEGGQARARLVEIGKRRASAEVVALDAVDVELPFRVTLAQGLPEGSKMDWIVEKAVELGAAGVIPLAAQRSVVRLSGDRADKRLAHWQAVVVSASEQCGRNRLADVAPVQDVNRWLADSGTGTRILLSPRADASLAQWV--RATPPRDVTLLVGPEGGFTDHEEDAARAAGALALSMGPRVLRTETAGLA-ALAILAAGWGG 240
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A656D426_9BACT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Candidatus Kryptobacter tengchongensis TaxID=1643429 RepID=A0A656D426_9BACT) HSP 1 Score: 110 bits (274), Expect = 6.900e-25 Identity = 81/242 (33.47%), Postives = 126/242 (52.07%), Query Frame = 0
Query: 70 FVDSLFRQGDVVELPHEEQKHL-RARRFRSGDKLVLFNSVGQTAASEYQN---QKV---LILEVSGSGQKDHNLSHLIAIPRKPSRADWLVEKLTELGADSITFMQTNRTVVA----DPSPNKLHRWRRIAVSASKQSMRDSTPEILV-VDFEAAIQRVSQHPLPLLL--SPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAICQFF 297
++D + VVE+ EE HL R R R G+ + LF+ G+ ++ N +K +I E G+ D +++ AI + P R ++ +EKLTELG I + T R + A D S NK+ RW++I +SA KQS R P++ VDF++ + +++ ++ S K +L L + S+L GPEGGF E ++G + ISLG RLR+ETA+I + QFF
Sbjct: 5 YIDPKDIKNGVVEIKGEEFHHLARVSRKRVGELIYLFDGGGKIYTAKIVNITREKAKCEIIAEEFMKGEIDVDIAVAQAILKNPERFEFAIEKLTELGTKYIIPLITERVIPAKSLEDISRNKIERWKKIILSACKQSNRALIPKLCEPVDFKSFVTEFTEYDRKVIFHESDEFKRILLYNYLERMKGVNSILVATGPEGGFTSEEIKLAVNSGFDVISLGERRLRSETASIIGVGVLIQFF 246
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A6J1IBI6_CUCMA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=7 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1IBI6_CUCMA) HSP 1 Score: 110 bits (275), Expect = 1.650e-24 Identity = 76/221 (34.39%), Postives = 116/221 (52.49%), Query Frame = 0
Query: 77 QGDVVELPHEEQKHL-RARRFRSGDKLVLFNSVGQTAASEYQNQKV-----LILEVSGSGQKDHNLSHLIAI--PRKPSRADWLVEKLTELGADSITFMQTNRTVVADPSPNKLHRWRRIAVSASKQSMRDSTPEI-LVVDFEAAIQRVSQHPLPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIA 288
+GD++ L +E H+ + R ++ D++ LFN G +N +V L +E S H+ A K RADWLVEK TELGA S+T + T R A S N++HR+ RI ++A+KQ R + + + + +++ L + PL+S+ L + E E L +VGPEG F + E N +++AGA + LG YRLR ETA +A
Sbjct: 81 KGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC--ATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSA--LASIETESGGLLVVGPEGDFTEKEVNMIKEAGAIAVGLGPYRLRVETATVA 297
BLAST of Gvermi6549.t1 vs. uniprot
Match: A0A8B8MF99_ABRPR (16S rRNA (uracil(1498)-N(3))-methyltransferase n=3 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8MF99_ABRPR) HSP 1 Score: 108 bits (271), Expect = 3.630e-24 Identity = 78/235 (33.19%), Postives = 126/235 (53.62%), Query Frame = 0
Query: 77 QGDVVELPHEEQKHL-RARRFRSGDKLVLFNSVGQTAASEYQNQKVLILEVSGSGQKDHNLSHLIAIPR--------------KPSRADWLVEKLTELGADSITFMQTNRTVVADPSPNKLHRWRRIAVSASKQSMRDSTPEILV---VDFEAAIQRVSQHPLPLLLSPNGKPLLSSCVLNNAERERSVLFLVGPEGGFEDHETNALQDAGANRISLGGYRLRTETAAIASAAAI 293
+G+V+ + +E H+ + R + D++ LFN G QN + +G L+ LI+IP K RADWL+EK TELGA+S+T + T R+ S +++ R R+ ++ASKQ R E+++ V+ + + R+SQ L L+ + + P+LS+ L E+E L ++GPEG F + E + + +AGA +SLG +RLR ETA+IA A +
Sbjct: 52 KGNVIRVKGDEFWHMTKVLRLSTNDRVQLFNGKGGLVEGCIQN-------IDRTGLDFVALNDLISIPPQNTQLHVFAGFGTLKGGRADWLLEKCTELGANSVTPLLTERSPAI--SESRVDRLERVILAASKQCQR--LHEMVLKPPVEIDDLLHRISQSKLSLVATASATPVLSA--LMTLEKENCGLIIIGPEGDFTEKEVSMMIEAGATAVSLGPHRLRVETASIALLATV 273 The following BLAST results are available for this feature:
BLAST of Gvermi6549.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6549.t1 ID=Gvermi6549.t1|Name=Gvermi6549.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=313bpback to top |