Gvermi6526.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6526.t1
Unique NameGvermi6526.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length162
Homology
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A2V3IRM2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRM2_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 6.730e-47
Identity = 80/111 (72.07%), Postives = 96/111 (86.49%), Query Frame = 0
Query:   51 EAMMPDAMKDTLLQDIKSMRAKRAPNSGADSQTGSLARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKK 161
            +A +P A++DTLLQDI+ MR KR   + A+++  S++ LK+ IE+ILLWDFFLV+ LL WLAVALVPHFASKND LLDPWLALWQPFIQPVLGVLMLGTIVQGT+S+ISKK
Sbjct:   17 DAKIP-AVEDTLLQDIQRMRTKRKGATEAEAKKSSISPLKNAIETILLWDFFLVIALLVWLAVALVPHFASKNDFLLDPWLALWQPFIQPVLGVLMLGTIVQGTLSYISKK 126          
BLAST of Gvermi6526.t1 vs. uniprot
Match: R7QS74_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS74_CHOCR)

HSP 1 Score: 147 bits (371), Expect = 3.680e-42
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 0
Query:   17 GSGVASYSRHRCRPTMGKDNDSEKSSKKNSASGREAMMPDAMKDTLLQDIKSMRAKRAPNSGADSQTGSLARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKK 161
            G+ VAS S  +      K  +SEK    ++     +    +  D L  D++ +RAKR        +T  ++ +KSV++S+L+W+FFLVLGLLGWL +AL+PHFASKND LLDPWLALWQPFIQPVLGVLMLGTIVQG+IS+I+ K
Sbjct:   29 GAKVASISMSKKTSKRAKRGESEKQPDPSTPPADASRSTVSAPDLLKADVERIRAKRKNAPAQKVETAPMSTVKSVVDSVLIWNFFLVLGLLGWLGIALIPHFASKNDVLLDPWLALWQPFIQPVLGVLMLGTIVQGSISYINSK 173          
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A1X6P8Z4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8Z4_PORUM)

HSP 1 Score: 99.4 bits (246), Expect = 8.960e-23
Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 0
Query:   56 DAMKDTLLQDIKSMRAKRAPNSGADSQTG-------SLARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKK 161
            ++++ TL +D+   R ++    G D+          +LAR+   + ++L+ DFF+V   L WL VALVPHFA  N+ LLD WL+LW   IQP+LGVLMLGTIV GT+S++  K
Sbjct:  109 ESVESTLARDLAGFRTRQRRREGKDAAAAVEPEAESTLARVGKTVNTLLVADFFVVCFFLAWLVVALVPHFAYHNEVLLDAWLSLWTLVIQPLLGVLMLGTIVAGTLSYVQSK 221          
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A7S0ZB81_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB81_9RHOD)

HSP 1 Score: 82.8 bits (203), Expect = 6.280e-17
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   60 DTLLQDIKSMRAKR-APNSGAD----SQTGSLARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKK 161
            D L  D++ MRA R + NS +D    +    + R+   ++ +L+ DFFLVL  L WLA+A+V     ++D L   W +LWQP IQP+LG+LMLGTIV GT+ ++++K
Sbjct:   70 DMLAADLELMRASRTSANSSSDVANRNNESMMKRVSDSLQLVLIVDFFLVLFFLLWLAIAVV----KQDDDLYTIWYSLWQPIIQPILGILMLGTIVTGTLRYVNQK 172          
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A835ZDF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.130e-16
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   60 DTLLQDIKSMRAKRAPNSGADSQTGSLARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTIS 156
            D L  DI   + + A     DS   + A LK++   IL  DFF+V+G LGWL VA++     K+ +LLD + A W P IQP LGVLM GTI  GT+S
Sbjct:   72 DELGADIAKYKRREAAAGPKDSSLDAGATLKAIFSWILTADFFIVVGFLGWLVVAVIARSVLKDGSLLDGFSAAWAPIIQPALGVLMAGTIASGTVS 168          
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A5J4YX53_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX53_PORPP)

HSP 1 Score: 76.3 bits (186), Expect = 1.620e-14
Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   57 AMKDTLLQDIKSMRAKRAPNSGADSQTGSLARLK-------SVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISK 160
            +++DTL +D+  ++AKRA                       S ++++L+ DFF+VLG L WLAVA+V +    +D L   W ALW P IQP LGVLMLGTIV G +    K
Sbjct:   54 SIEDTLAEDLARLKAKRAXXXXXXXXXXXXXXXXXXXXXAASFVQTVLVADFFVVLGFLAWLAVAVVKN----DDDLYSQWYALWTPLIQPALGVLMLGTIVSGVLGMGKK 160          
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A7S1TMC3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMC3_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 5.700e-14
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   60 DTLLQDIKSMRAKRAPNSGADSQTGSLARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKK 161
            + L +D++ MR++RA  + + + + +     ++++ IL+ DFFLVLG L WLAVA+V    S ND          +PFIQP LGVLMLGTIV G  S ++KK
Sbjct:   75 EMLARDLEVMRSRRAAKAASTTDSKAGFDGGALLQKILIADFFLVLGFLAWLAVAVV----SGNDDWYSQXXXXXEPFIQPALGVLMLGTIVSGLTSAMNKK 172          
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A7S1TBK9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBK9_9RHOD)

HSP 1 Score: 72.8 bits (177), Expect = 4.010e-13
Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 0
Query:   60 DTLLQDIKSMRAKRAPNSGADSQTGS---------LARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKK 161
            + LL+DI+ M+ K+      D Q G           + LK+ + +    +F  VL  L WLAVAL      + D+L D W  +W   IQP LG+LMLGT++ GT+S ++++
Sbjct:   56 ERLLEDIRRMKEKKRSAGARDEQDGEENEKVDQGLASALKNALWTAFGVNFAAVLFFLAWLAVALALRLGMREDSLFDAWYRIWPTVIQPSLGILMLGTVISGTLSNLNRR 166          
BLAST of Gvermi6526.t1 vs. uniprot
Match: A0A1Y1IJR1_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJR1_KLENI)

HSP 1 Score: 69.3 bits (168), Expect = 1.040e-11
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 0
Query:   56 DAMKDTLLQDIKSMRAKRAPNSGADSQTGSLARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKK 161
            D +     Q+ KS  A  A    +D+ T +    KSVI++IL+ DFF ++ +L WL   +V   A  +  LLD WL LW    QP +GVLM GTIV GTIS +S+ 
Sbjct:   76 DRLSSDEFQEAKSFFA--ATKEFSDNATRAT---KSVIDTILVADFFFIILVLLWLIAGVVERQALDSTKLLDVWLPLWGTVFQPAIGVLMAGTIVSGTISTLSQN 176          
BLAST of Gvermi6526.t1 vs. uniprot
Match: M1V739_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V739_CYAM1)

HSP 1 Score: 65.1 bits (157), Expect = 4.240e-10
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   62 LLQDIKSMRAKRAPNSGADSQTGS----LARLKSVIESILLWDFFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTI 150
            LL DI+  R +++P +    Q G       RL+S + ++L+ D FLV   + WL V ++    S   ALLD W  LWQP +QP+LG+LM G +
Sbjct:   83 LLSDIERFR-RQSPGNAEKIQVGESKPVAGRLRSWLTNLLIADAFLVFFFMAWLVVGVILQLTSGYSALLDVWYILWQPVVQPLLGLLMAGAL 174          
The following BLAST results are available for this feature:
BLAST of Gvermi6526.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IRM2_9FLOR6.730e-4772.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QS74_CHOCR3.680e-4252.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P8Z4_PORUM8.960e-2344.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZB81_9RHOD6.280e-1742.99Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A835ZDF1_9STRA2.130e-1645.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5J4YX53_PORPP1.620e-1440.54Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1TMC3_9RHOD5.700e-1443.14Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S1TBK9_9RHOD4.010e-1335.14Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1Y1IJR1_KLENI1.040e-1141.51Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
M1V739_CYAM14.240e-1038.71Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..117
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 95..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1238461..1238946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6526.t1Gvermi6526.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1238461..1238946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6526.t1 ID=Gvermi6526.t1|Name=Gvermi6526.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=162bp
MTSTTGFVFTPTPKRLGSGVASYSRHRCRPTMGKDNDSEKSSKKNSASGR
EAMMPDAMKDTLLQDIKSMRAKRAPNSGADSQTGSLARLKSVIESILLWD
FFLVLGLLGWLAVALVPHFASKNDALLDPWLALWQPFIQPVLGVLMLGTI
VQGTISFISKK*
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