Gvermi6519.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6519.t1
Unique Name	Gvermi6519.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	631

Homology

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BLAST of Gvermi6519.t1 vs. uniprot
Match: A0A2V3J3U9_9FLOR (SAM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3U9_9FLOR)

HSP 1 Score: 323 bits (829), Expect = 6.560e-99
Identity = 263/642 (40.97%), Postives = 366/642 (57.01%), Query Frame = 0

Query:    1 MGFDHALDCCPSCAIPLTLFTPRERVQHINECLDSERREQQTHAPSCAXXXXXXXXXXXXXXXXXXXXXXXVSVPRPRQRQPVRKRPRSTGL----PSSSAPRQPLPRKRCDEKVVKLLTHLGLERYAQRFADEEIDLDTLRILKDEDFVNLRIPDAARRRIADALHAVPILDRLQTSTIAEERSEPSIIPTQKFGTSKLGAALPRRKSLFEDDEDLEYRPTQTAI------PNTKQAVEKGPNPGSPKVFSRSTACALETVDLITPSKNENKDKAAIQTNSQLSDDSDFDFDTAILMESQISLETKIEKWRKREMRKEEMRHQSELCKIESTYRSMMARLEGTTKASAAASAPSECITFTRKSEAIELAGPAPIDLTTELSDEAEVVPESDPPKETGKDGKTQARESLGTSNEQESGRVPVIDCCSDSDEEFMRKHVLRSPPSGYKSLLPALDFGSDSEILG--DLNQKEKQVGSKAGVLHRKSNAAPSCEKGSGGYDLSHDLSSSSGQQECLKGDSPEERQSSDLERNMTVRLTLSNNDADXXXXXXXXXXXXXXRRKKKRGVSHEEISAAIRKDKDLYDRILKVESIAFDVILQSIRRSGTAVSRNALTNYLHSEGIMYKGDATSKSSKAYLNTLNFPF 630
            M     LD CPSC++P TLF P +   HIN C DS  +E+   AP C   XXXXXXXXXXXXXXXXXXXX   +P     +PV+++P ++      P+ S+P    PR++CDE++  LL  LGL+RY QRFADEEIDL  LR+L DEDFV LRIPD ARRRIADALHAVPILD LQ +   E  +E  IIPTQ+F TS+LGA L RRK L+E+++D EY+PTQ         P    A ++    G+ K +  S A  L+T   +   K  + +  A+  +S   D+S+ DF+  I ++SQISLE KIE WR+R++R+EE RH + + +I++ Y+ M+++LE   K     + P+E +   +K+E  E    A +DLT E   E+     + P     +     + ES    N + +      +  SDSDEE +R  +L+S       +  AL+  SD ++     L+   +   S+   L R+   A S E+     D+   +   S Q +    +S   R+ S  +R    RL+     +D               +KK+ G  HE I+ AIRKD+DLYDRILKVES+ +  IL S+R+SG  VS+ ALT +LH+EGIMYKG+A SK S+ YLN LN  F
Sbjct:    1 MNHKTFLDACPSCSVPFTLFAPHDIESHINRCFDS--KEKTNDAPICGTCXXXXXXXXXXXXXXXXXXXXDEQLPL----RPVKRKPPNSSAQFARPTVSSP----PRQKCDEQLTDLLNLLGLQRYTQRFADEEIDLKALRLLTDEDFVRLRIPDPARRRIADALHAVPILDGLQPTDEVEPTNEERIIPTQRFATSRLGAMLQRRKPLYEEEDDDEYKPTQKPTGSQRHTPTGDSAPDRTSLMGTTKTYGISQA-KLDTAASLRKEKYSSLNLGALSASS---DESELDFERDISLKSQISLEMKIENWRRRQLRQEETRHTAVVQRIQNRYQEMVSQLE---KEKENQTRPAEVL---QKAEFNEQRTTAVVDLTEETVRESVEETRAAPDICINETVVISSAES--DDNAKTARAAKRSNTYSDSDEESLRGMILKS------HIGSALESDSDLDVFKAPKLSAGWRPGTSRELSLRRQKERAASDEE-----DMIDLMRERSPQDKSGTNNSALLREPSAGKR--ISRLSPKRACSDSDSNSEEGQDAVSRLKKKRTGTGHEIIATAIRKDRDLYDRILKVESVPYSGILNSVRQSGLNVSKKALTTFLHTEGIMYKGEAVSKGSRDYLNKLNSDF 607

The following BLAST results are available for this feature:

BLAST of Gvermi6519.t1 vs. uniprot

BLAST of Gvermi6519.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J3U9_9FLOR	6.560e-99	40.97	SAM domain-containing protein n=1 Tax=Gracilariops...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 109..164 e-value: 4.4E-7 score: 30.2
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 105..170 e-value: 9.0E-11 score: 43.5
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 109..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 517..542
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 378..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 480..553
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..412

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_88	contig	ScGOVlb_88:1217226..1219118 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6519.t1	Gvermi6519.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_88 1217226..1219118 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6519.t1 ID=Gvermi6519.t1|Name=Gvermi6519.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=631bp
MGFDHALDCCPSCAIPLTLFTPRERVQHINECLDSERREQQTHAPSCAVC
SRNLNFLTPVARQEHVNRCLDVSVPRPRQRQPVRKRPRSTGLPSSSAPRQ
PLPRKRCDEKVVKLLTHLGLERYAQRFADEEIDLDTLRILKDEDFVNLRI
PDAARRRIADALHAVPILDRLQTSTIAEERSEPSIIPTQKFGTSKLGAAL
PRRKSLFEDDEDLEYRPTQTAIPNTKQAVEKGPNPGSPKVFSRSTACALE
TVDLITPSKNENKDKAAIQTNSQLSDDSDFDFDTAILMESQISLETKIEK
WRKREMRKEEMRHQSELCKIESTYRSMMARLEGTTKASAAASAPSECITF
TRKSEAIELAGPAPIDLTTELSDEAEVVPESDPPKETGKDGKTQARESLG
TSNEQESGRVPVIDCCSDSDEEFMRKHVLRSPPSGYKSLLPALDFGSDSE
ILGDLNQKEKQVGSKAGVLHRKSNAAPSCEKGSGGYDLSHDLSSSSGQQE
CLKGDSPEERQSSDLERNMTVRLTLSNNDADSSSSSGELQQTQTSRRKKK
RGVSHEEISAAIRKDKDLYDRILKVESIAFDVILQSIRRSGTAVSRNALT
NYLHSEGIMYKGDATSKSSKAYLNTLNFPF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001660	SAM
IPR013761	SAM/pointed_sf