Gvermi6501.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6501.t1
Unique NameGvermi6501.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length268
Homology
BLAST of Gvermi6501.t1 vs. uniprot
Match: A0A2V3IMN7_9FLOR (Alpha-ketoglutarate-dependent dioxygenase alkB-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMN7_9FLOR)

HSP 1 Score: 349 bits (895), Expect = 3.780e-119
Identity = 166/206 (80.58%), Postives = 185/206 (89.81%), Query Frame = 0
Query:   34 KITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYRRVVNEHEHSKDQ 239
            KIT++K FL K EAD+LL AT +ARSWARTPVTFFGK+VLQPRDTAFFGTKLYTYSDERR+PTGW++DPPAS ALH LG RIE  LGLP +WFNVILANRY+NGRDFMGWHSDNE+SLG EPIIASIS+G++RRFLVRLR AY     PEKIEY+L HGSLLVMSG+MQS+YQHSLPKVALSKCN LRLNFTYRRVVNE +HSK+Q
Sbjct:   29 KITFYKHFLTKLEADELLQATVDARSWARTPVTFFGKKVLQPRDTAFFGTKLYTYSDERRQPTGWQDDPPASTALHELGHRIETALGLPTEWFNVILANRYHNGRDFMGWHSDNERSLGDEPIIASISIGAQRRFLVRLRAAYHTGDTPEKIEYVLEHGSLLVMSGKMQSFYQHSLPKVALSKCNSLRLNFTYRRVVNESDHSKNQ 234          
BLAST of Gvermi6501.t1 vs. uniprot
Match: R7QHN6_CHOCR (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHN6_CHOCR)

HSP 1 Score: 319 bits (817), Expect = 2.860e-107
Identity = 157/233 (67.38%), Postives = 185/233 (79.40%), Query Frame = 0
Query:    5 RKTSRGRQLPQFILRPGPEGDLLLPESRGKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYRRVVNEHEHSK 237
            R+    R+    ++RPGP+G L LPES G +TY   FL + +A+ LL  TK+A SW RTP+TFFGK VLQPRDTAFFGTKLY+YSDERR PTGWEED PAS AL  LG +IE+ L LP+DWFNVILANRY +G+DFMGWHSDNEKSLG  PIIASISLG+ERRFL+R +   QE    EK+EY+L HGSLLVM+G MQ  YQHSLPKVALSKC++LRLNFT+RRVV+E + SK
Sbjct:    3 RRQVAKRKRATDLIRPGPDGKLCLPESAGSVTYVPSFLSQADANLLLEETKDACSWERTPITFFGKSVLQPRDTAFFGTKLYSYSDERRMPTGWEEDLPASAALKRLGNQIEDHLQLPKDWFNVILANRYWHGQDFMGWHSDNEKSLGDHPIIASISLGAERRFLLRKKGVVQEGEQREKLEYVLKHGSLLVMTGTMQKTYQHSLPKVALSKCDQLRLNFTFRRVVDESDQSK 235          
BLAST of Gvermi6501.t1 vs. uniprot
Match: UPI001E1D24E2 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D24E2)

HSP 1 Score: 239 bits (611), Expect = 7.320e-76
Identity = 124/218 (56.88%), Postives = 152/218 (69.72%), Query Frame = 0
Query:   19 RPGPEGDLLLPESRGKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYRRVVN-EHEH 235
            R GP G L LP   G + Y  +FL++ EAD L   T +A +W  TP+TFFGK VLQPRDTAF+GT  Y+YSDE R P  W+  PPASNAL  L  RIE  L LP D+FNV L N+Y NG  +MG+H+D+E SLG  PIIASIS+G+ERRFL+R + + + E    +IEY+LAHGSLLVM+G  Q YY+H+LPK A  K  E RLNFT+R VV  E EH
Sbjct:   19 RAGPSGTLTLPNKYGTVMYIPEFLDRSEADALFEKTIDAPAWQCTPITFFGKSVLQPRDTAFYGTAPYSYSDETRPPVHWDAQPPASNALFDLKCRIERFLELPNDYFNVALCNKYTNGTRYMGYHADDELSLGECPIIASISVGTERRFLLRPKDSAKLEDS-RRIEYVLAHGSLLVMAGHTQKYYKHALPKQA--KATETRLNFTFRHVVGQEDEH 233          
BLAST of Gvermi6501.t1 vs. uniprot
Match: A0A0Q2SHM0_VIBFU (DNA repair protein n=14 Tax=Vibrio TaxID=662 RepID=A0A0Q2SHM0_VIBFU)

HSP 1 Score: 158 bits (400), Expect = 1.350e-44
Identity = 92/207 (44.44%), Postives = 119/207 (57.49%), Query Frame = 0
Query:   26 LLLPESRGKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYRRVVNE 232
            L LP SR  + + + FL ++EAD       +   W +  +T FGK VLQPR  A++G K YTYS    +PT W      +  L  L  R E + G     FN +LAN Y +GRD MGWH DNE  LGR+P+IAS+SLG  RRF++R        H  EK E  L HGSLLVM+G  Q  +QHSLPK A +K    R+N T+R + +E
Sbjct:   16 LTLPNSR--LLWVEHFLTEQEADHAYSVLTSELDWQQQAITLFGKSVLQPRLQAWYGEKAYTYSGLTMQPTPW------TPLLAALKARCEAMAGCT---FNSVLANLYRDGRDSMGWHQDNEPELGRQPVIASLSLGESRRFVLR------HLHTKEKFELTLGHGSLLVMAGDTQHDWQHSLPKTARAKAP--RINLTFRHIRDE 203          
BLAST of Gvermi6501.t1 vs. uniprot
Match: A0A0C3I6U4_9VIBR (DNA repair protein n=1 Tax=Vibrio mytili TaxID=50718 RepID=A0A0C3I6U4_9VIBR)

HSP 1 Score: 156 bits (394), Expect = 9.240e-44
Identity = 83/196 (42.35%), Postives = 114/196 (58.16%), Query Frame = 0
Query:   31 SRGKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTY 226
             +GKI YH  FL   EAD+     +    W +  +T FG+ VLQPR  A+ G   YTYS    +P  W  +      L  L +R E++    Q+ FN +LAN Y NG+D MGWH DNE  LG  P+IAS++LG+ RRFL+R        H   +IEY L+HGSLL+M+G++Q +++HS+PK A  K   + L F Y
Sbjct:   17 DQGKIYYHPNFLSLLEADEYFTKLRTTLPWQQKSITLFGRSVLQPRLQAWHGDATYTYSGLTSEPHPWTPE------LSELKQRCESIA---QEPFNSVLANLYRNGQDSMGWHQDNEPELGTNPVIASLNLGATRRFLLR------NLHCKTQIEYELSHGSLLIMAGKLQHHWKHSVPKTAKPKGERINLTFRY 197          
BLAST of Gvermi6501.t1 vs. uniprot
Match: A0A1Y1Z2J2_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z2J2_9FUNG)

HSP 1 Score: 157 bits (397), Expect = 1.050e-43
Identity = 97/236 (41.10%), Postives = 128/236 (54.24%), Query Frame = 0
Query:    7 TSRGRQLPQFILRPGPEGDLLL---PESR------GKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLV--RLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYRRVVN 231
              + R  P       PE D ++   PE R      G +TY+ ++  KE+AD  L   +    W R P+  FGK V QPR  A+ G K YTYS     PT W  DP      ++L    E+ L LP+D+FN +L NRY +G ++MG+HSDNE SLG  PIIAS S G  R F    +L K+        KIEY L HGS LVMSG  Q Y++H+LPK   S   + R+N T+R+V +
Sbjct:   18 NKKPRGSPSAATTNTPEPDPVVIKPPEIRELQGGTGTLTYYPRYFTKEQADRYLEYLEENLEWKRYPIKMFGKVVQQPRTIAYIGDKQYTYSGLTLGPTAW--DPVVKEIANSL----EDTLELPRDYFNFVLCNRYTSGAEYMGYHSDNESSLGERPIIASTSFGQARPFFFQHKLDKSL-------KIEYHLEHGSTLVMSGLTQKYWKHALPKRP-SALYQTRINLTFRKVFH 239          
BLAST of Gvermi6501.t1 vs. uniprot
Match: A0A349FDY6_VIBSX (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Vibrio sp. TaxID=678 RepID=A0A349FDY6_VIBSX)

HSP 1 Score: 155 bits (393), Expect = 1.160e-43
Identity = 82/197 (41.62%), Postives = 120/197 (60.91%), Query Frame = 0
Query:   31 SRGKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYR 227
              G++ Y ++FL +++AD+L  +      W +  +T FG+ VLQPR  A+F    Y YS    KPT      P   ++ TL K+ E++    +  FN +L N Y NG+D+MGWH DNEK LG  PIIASISLG+ER+F ++ + + Q      K++Y L+HGSL VM+G +Q Y++H+LPK  L    E R+N T+R
Sbjct:   11 DNGRLLYREEFLSQQQADELYHSLYTKTHWRQESITLFGRSVLQPRLQAWFSEHAYQYSGLLLKPT------PIPPSIATLKKQCEHIC---RQEFNSVLLNLYRNGQDYMGWHQDNEKELGHNPIIASISLGAERKFTLKHKDSKQ------KLDYKLSHGSLFVMAGEVQHYWKHALPKTTL--ITEPRINLTFR 190          
BLAST of Gvermi6501.t1 vs. uniprot
Match: K9Z846_CYAAP (DNA-N1-methyladenine dioxygenase n=5 Tax=Cyanobacterium TaxID=102234 RepID=K9Z846_CYAAP)

HSP 1 Score: 155 bits (391), Expect = 2.120e-43
Identity = 88/202 (43.56%), Postives = 123/202 (60.89%), Query Frame = 0
Query:   28 LPESRGKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGT--KLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYR 227
            LP S  +I+YHK F  ++EA  LL   K+   W +  +T FGK  L+PR TA++G   K+YTYS+    P  W +       L T+  RIEN++G+    FN +L N Y +G+D MGWHSDNE  LG+ P+IAS S G ERRFL++ R    +++  ++ E IL HGSLL+M+G  Q Y+ H +PK   SK    R+N T+R
Sbjct:    5 LPHS--EISYHKNFWSEKEATLLLEKLKSEIQWQQKTITLFGKTHLEPRLTAWYGDEGKIYTYSNSTMFPHKWNK------TLITIKNRIENIIGIE---FNSVLLNYYRHGKDSMGWHSDNEPELGKNPVIASASFGGERRFLLKPR----DKNQSQRKEIILRHGSLLIMAGETQHYWLHQIPKT--SKPVSERINLTFR 189          
BLAST of Gvermi6501.t1 vs. uniprot
Match: A0A2T3N9E6_9GAMM (Alpha-ketoglutarate-dependent dioxygenase AlkB n=3 Tax=Photobacterium TaxID=657 RepID=A0A2T3N9E6_9GAMM)

HSP 1 Score: 152 bits (385), Expect = 2.200e-42
Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0
Query:   32 RGKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYRRVV 230
            +G++ +H  FLE   AD      ++  +W +  +  FGK+V QPR  A+ G  +YTYS    +P  W      +  L  + +++  LLG+    FN +LAN Y NG+D MGWH DNE  LG +P+IAS+SLG+ RRF++R +++       EK EY L HGSLLVM+G +Q+Y+QH++PK    + +  R+N T+R ++
Sbjct:   19 QGRVYWHPHFLESSLADKCYQRLEDELNWQQKKIVIFGKEVWQPRLQAWCGEAVYTYSGLTMQPDPW------TPTLQVIRQQLNELLGVN---FNSVLANLYRNGKDSMGWHQDNEPELGEQPVIASVSLGATRRFVLRHKQS------KEKQEYQLNHGSLLVMAGDLQTYWQHAVPKT--QRVDTPRINLTFREII 200          
BLAST of Gvermi6501.t1 vs. uniprot
Match: A0A2T3NNQ6_9GAMM (Alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=Photobacterium sanctipauli TaxID=1342794 RepID=A0A2T3NNQ6_9GAMM)

HSP 1 Score: 151 bits (382), Expect = 8.040e-42
Identity = 81/198 (40.91%), Postives = 119/198 (60.10%), Query Frame = 0
Query:   33 GKITYHKQFLEKEEADDLLLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEEDPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKSLGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGRMQSYYQHSLPKVALSKCNELRLNFTYRRVV 230
            G++ +  QF    EAD L     ++ +W + P+  FG+QVLQPR  A+ G  +Y YS     P  W      + AL  +  R+++ LG     FN +LAN+Y +GRD+MGWH DNE  LG +P+IAS+SLG ERRF+++           EK EY L+HGSLLVM+G +Q+++ HS+PK    K  + R+N T+R ++
Sbjct:   30 GQLLWLPQFFSPSEADRLYRELDSSLAWQQLPIQMFGRQVLQPRLQAWCGDAVYQYSGLTMHPDPW------TPALVDIKSRLQSTLGRD---FNSVLANKYRDGRDYMGWHQDNEPELGHQPVIASVSLGEERRFVLKHLAT------GEKREYALSHGSLLVMAGALQTHWLHSVPKTQRPK--KSRINLTFRTII 210          
The following BLAST results are available for this feature:
BLAST of Gvermi6501.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMN7_9FLOR3.780e-11980.58Alpha-ketoglutarate-dependent dioxygenase alkB-lik... [more]
R7QHN6_CHOCR2.860e-10767.38Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
UPI001E1D24E27.320e-7656.88alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
A0A0Q2SHM0_VIBFU1.350e-4444.44DNA repair protein n=14 Tax=Vibrio TaxID=662 RepID... [more]
A0A0C3I6U4_9VIBR9.240e-4442.35DNA repair protein n=1 Tax=Vibrio mytili TaxID=507... [more]
A0A1Y1Z2J2_9FUNG1.050e-4341.10Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A349FDY6_VIBSX1.160e-4341.62Alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]
K9Z846_CYAAP2.120e-4343.56DNA-N1-methyladenine dioxygenase n=5 Tax=Cyanobact... [more]
A0A2T3N9E6_9GAMM2.200e-4239.70Alpha-ketoglutarate-dependent dioxygenase AlkB n=3... [more]
A0A2T3NNQ6_9GAMM8.040e-4240.91Alpha-ketoglutarate-dependent dioxygenase AlkB n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 35..227
e-value: 1.1E-28
score: 100.7
IPR037151Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyGENE3D2.60.120.590coord: 27..237
e-value: 4.3E-52
score: 178.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..267
NoneNo IPR availablePANTHERPTHR31212:SF4ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3coord: 31..233
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 27..229
IPR032854Alkylated DNA repair protein alkB homologue 3PANTHERPTHR31212ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3coord: 31..233
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 125..230
score: 10.727408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1145542..1146345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6501.t1Gvermi6501.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1145542..1146345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6501.t1 ID=Gvermi6501.t1|Name=Gvermi6501.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=268bp
MEKSRKTSRGRQLPQFILRPGPEGDLLLPESRGKITYHKQFLEKEEADDL
LLATKNARSWARTPVTFFGKQVLQPRDTAFFGTKLYTYSDERRKPTGWEE
DPPASNALHTLGKRIENLLGLPQDWFNVILANRYNNGRDFMGWHSDNEKS
LGREPIIASISLGSERRFLVRLRKAYQEEHPPEKIEYILAHGSLLVMSGR
MQSYYQHSLPKVALSKCNELRLNFTYRRVVNEHEHSKDQPTLERQCGREG
NDAPSMLSESESKRMRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
IPR037151AlkB-like_sf
IPR032854ALKBH3
IPR005123Oxoglu/Fe-dep_dioxygenase