Gvermi6499.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6499.t1
Unique NameGvermi6499.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length353
Homology
BLAST of Gvermi6499.t1 vs. uniprot
Match: A0A2V3IMN8_9FLOR (DUF4097 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMN8_9FLOR)

HSP 1 Score: 398 bits (1023), Expect = 2.410e-135
Identity = 197/342 (57.60%), Postives = 257/342 (75.15%), Query Frame = 0
Query:    4 TRVLSAVRIATRQLHIQSWKLSSAPYGSLKISLPFTCNLNISPLDPHESDWEQTNIHLHIPTSAGMSEADARNLSRKLAVRAGQDADDGSSAHVEASAVQNDPTIAALLSANVPELRVEIPGLHNLWVEMADGKLRLCDTIEGDLRVRSDSAAVFINKLRSTSASIETKKGDVEARILQGNVSINCESGAVKLARAQGNDIKVRCGGALEAGCLYGGRMILRSDGGFSADAVHGEADVEAEKAEISAVQGKLKLKSKGDVRLTLADAGTELIEIDAGGDVCLGVQKNLVAEFSVQAKTVRDEVGVLQNSERGV-EHAGNACSVRVRCARSVTLRDEQWAGRV 344
            +R  S++R+  RQ+HI+SW+LS+ PYGSL + LPF C +NISPLDPH+SDW   NIHLHIPT + +SE+ AR+L+ K+ ++  +D D GS   VE S +Q+DP + + +  + PEL VEIPGLHNL VE+  G LRLCDTIEGD+ ++++SA +FINKLRSTSA IET KGDV+ARILQG+V INC+SG VKL RAQGND+ + CGG  EA  +YGGR+ +R+ G    DAVHG+ D+EA  A ISAVQG+LK++S GDV LTLAD+G + ++IDAGGDV LG+QK +VA+F +QA+ VRDE G LQ S  G  EHA +  SV V  +  VTLRD+ WA R+
Sbjct:   11 SRFGSSIRVVRRQIHIRSWQLSTKPYGSLSVKLPFACKVNISPLDPHKSDWTNANIHLHIPTCSNLSESQARDLAEKVGMKCFEDEDAGSLVRVE-SVLQDDPLLESSVVCHTPELYVEIPGLHNLQVELKTGDLRLCDTIEGDVHIKTESAPIFINKLRSTSARIETLKGDVDARILQGDVCINCDSGNVKLKRAQGNDMSIECGGKFEADSMYGGRIAVRTKGKLRIDAVHGDVDIEAANASISAVQGRLKMRSTGDVNLTLADSGGKRVDIDAGGDVRLGIQKGVVAQFELQARNVRDEAGALQRSAPGPGEHAEDCWSVHVSASGDVTLRDDGWAQRI 351          
BLAST of Gvermi6499.t1 vs. uniprot
Match: A0A2V3IF60_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF60_9FLOR)

HSP 1 Score: 82.4 bits (202), Expect = 4.450e-16
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query:   76 NLSRKLAVRAGQDADDGSSAHVEASAVQNDPTIAALLSANVPELRVEIPGLHNLWVEMADGKLRLCDTIEGDLRV 150
            N + +L +RA ++ D GSSAH+EASAVQND     +   + PELRVE+PGLHNL +E+  G ++L DTIEGDLR+
Sbjct:    4 NAASELKIRAREELDRGSSAHIEASAVQNDWESDKVFDTHTPELRVELPGLHNLCIELDHGIIQLHDTIEGDLRI 78          
BLAST of Gvermi6499.t1 vs. uniprot
Match: A0A7S1ETV7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETV7_9RHOD)

HSP 1 Score: 82.0 bits (201), Expect = 7.220e-14
Identity = 55/174 (31.61%), Postives = 94/174 (54.02%), Query Frame = 0
Query:  135 DGKLRLCDTIEG-DLRVRSDSAAVFINKLRSTSASIETKKGDVEARILQGNVSINCESGAVKLARAQGNDIK-VRCGGALEAGCLYGGRMILRSDGG-FSADAVHGEADVEAEKAEISAVQGKLKLK---SKGDVRLTLADAGTELIEIDAGGDVCLGVQKNLVAEFSVQAKTV 302
            DG +RL    EG D R+ + SA+VF+  L+  +  IET+ GD+++++L GN+++  +SG V   R QG  I+ +   GA+  G LYG   ++R++ G  S   + G + V ++  +++   G+  L    S+G VRL L+      +    G DV LG+   L A+  ++   V
Sbjct:    3 DGGIRLNGLFEGQDARILTSSASVFVEALQCPNIEIETRSGDIQSKVLNGNIAVRTDSGDVFADRLQGETIRCITDSGAINLGSLYGKYSVIRANSGDISIATLKGISCVRSKTGDLNLAGGEEDLDIEASRGQVRLQLSSPREVYVRCYRG-DVMLGLPPTLSADVDLEGNQV 175          
The following BLAST results are available for this feature:
BLAST of Gvermi6499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IMN8_9FLOR2.410e-13557.60DUF4097 domain-containing protein n=1 Tax=Gracilar... [more]
A0A2V3IF60_9FLOR4.450e-1654.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1ETV7_9RHOD7.220e-1431.61Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34094FAMILY NOT NAMEDcoord: 9..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1142402..1143460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6499.t1Gvermi6499.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1142402..1143460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6499.t1 ID=Gvermi6499.t1|Name=Gvermi6499.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=353bp
MNSTRVLSAVRIATRQLHIQSWKLSSAPYGSLKISLPFTCNLNISPLDPH
ESDWEQTNIHLHIPTSAGMSEADARNLSRKLAVRAGQDADDGSSAHVEAS
AVQNDPTIAALLSANVPELRVEIPGLHNLWVEMADGKLRLCDTIEGDLRV
RSDSAAVFINKLRSTSASIETKKGDVEARILQGNVSINCESGAVKLARAQ
GNDIKVRCGGALEAGCLYGGRMILRSDGGFSADAVHGEADVEAEKAEISA
VQGKLKLKSKGDVRLTLADAGTELIEIDAGGDVCLGVQKNLVAEFSVQAK
TVRDEVGVLQNSERGVEHAGNACSVRVRCARSVTLRDEQWAGRVLGVGCA
RT*
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