Gvermi6493.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6493.t1
Unique Name	Gvermi6493.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	134

Homology

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A2V3IML4_9FLOR (Cytochrome B5-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IML4_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 6.280e-65
Identity = 95/130 (73.08%), Postives = 111/130 (85.38%), Query Frame = 0

Query:    4 LPLAIIGLLLCICVYVLNRRYRHGGLGGGSPVLAAPQTASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDLAPPETSDKKGD 133
            LPLA+IGL+LCI +YV+ RR RHGGL GGS +LA P  A+S+GS R Y+E++VA HN+  DLWLIIKGKVY+ + Y ALHPGGEAMLRNAGRDSTKGFSGSQHPARVWD+IDEFYIG++A  ETSDKK D
Sbjct:    4 LPLAVIGLVLCIGLYVVFRRQRHGGLAGGSAILATPHRAASLGSDRVYSEQEVAQHNTAEDLWLIIKGKVYDLSPYIALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDMIDEFYIGNVATLETSDKKAD 133

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A6V7QVF7_ANACO (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QVF7_ANACO)

HSP 1 Score: 110 bits (276), Expect = 6.290e-29
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 0

Query:   17 VYVLNRRYRHGGLGGGSPVLAAPQTASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDLAP 124
            ++++ R +   G   G+P     +TA      R YT+++V+ HN+  D W+IIK KVY+ T Y   HPGG+A+L NAG DST+GF G QH +RV+D++DEFYIGDL P
Sbjct:   17 LFIIPRSHSSKGKANGAPSNVNGKTA------RTYTKKEVSLHNTRKDCWIIIKDKVYDVTPYVEEHPGGDAILNNAGGDSTEGFYGPQHASRVFDMVDEFYIGDLKP 118

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A1D1YBG7_9ARAE (Cytochrome b5 n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YBG7_9ARAE)

HSP 1 Score: 107 bits (268), Expect = 9.970e-28
Identity = 53/117 (45.30%), Postives = 72/117 (61.54%), Query Frame = 0

Query:    8 IIGLLLCICVYVLNRRYRHGGLGGGSPVLAAPQTASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDLAP 124
            ++GLL+    +    R    G+          QT S+    + YT+ +V+ HNS  D W+I+K KVY+ T Y   HPGG+A+LRNAG DST+GF G QH  RV+D+IDEFY+GDL P
Sbjct:    9 LLGLLMAALFFTSRPRKNGDGI--------VVQTLSTRKIFKKYTQAEVSLHNSRKDCWIIVKDKVYDVTPYVEEHPGGDAILRNAGGDSTEGFYGPQHATRVFDMIDEFYVGDLKP 117

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A8B9AK67_PHODC (cytochrome B5-like protein n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AK67_PHODC)

HSP 1 Score: 107 bits (268), Expect = 9.970e-28
Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 0

Query:    6 LAIIGLLLCICVYVLNRRYRHGGLGGGSPVLAAPQTASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDLAP 124
            + I+ L++   ++++ R   +G   G  P +    T+ ++   + YT+E+V  HN  +D W+IIKGKVY+ T Y   HPGG+AML NAG DST+GF G QH  RV+D++DEF IGDL P
Sbjct:    6 MTIVVLIVLGALFIIPRSKNNGKTKGTRPSV----TSKTL---KTYTKEEVCLHNKRDDCWIIIKGKVYDVTPYVEEHPGGDAMLNNAGGDSTEGFYGPQHATRVFDMVDEFCIGDLKP 117

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A833W3E9_9POAL (Cytochrome b5 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833W3E9_9POAL)

HSP 1 Score: 107 bits (268), Expect = 1.090e-27
Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 0

Query:   41 TASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDL 122
            ++S V + R YT+E+V+ HN+  D W+I+K KVY+ T Y   HPGG+A+L NAGRDST+GF G QH  RV+D++DEFYIGDL
Sbjct:   37 SSSLVKNVRDYTKEEVSKHNTRKDCWIIVKDKVYDVTPYVEEHPGGDAILNNAGRDSTEGFYGPQHATRVFDMVDEFYIGDL 118

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A0K9P4P9_ZOSMR (Cytochrome B5-like protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P4P9_ZOSMR)

HSP 1 Score: 107 bits (267), Expect = 1.410e-27
Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 0

Query:   49 RFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDLAP 124
            R YTE +V+ HNS  D W+I+K +VY+ T Y   HPGG+++L+NAGRDST+GF G QH  RV+D+ID+FYIGDL P
Sbjct:   42 RAYTESEVSLHNSRKDCWIIVKDQVYDVTSYVEEHPGGDSILKNAGRDSTEGFFGPQHGTRVFDIIDDFYIGDLKP 117

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A426YJD6_ENSVE (Cytochrome b5 heme-binding domain-containing protein n=3 Tax=Musaceae TaxID=4637 RepID=A0A426YJD6_ENSVE)

HSP 1 Score: 108 bits (269), Expect = 1.600e-27
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0

Query:    6 LAIIGLLLCICVYVLNRRYRHGGLGGGSPVLAAPQTASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDL 122
            +A+I LLL   ++V+ R  R G   G  P +            + YT+E+V+ HN+  D W+I+K KVYN T Y   HPGG+A+L NAG +ST+GF G QH  RV+D++DEFYIGDL
Sbjct:   35 IAMILLLLLGALFVIPRSSRKGKAQGTHPSVTTKTR-------KTYTKEEVSLHNTRTDCWIIVKDKVYNVTPYVEEHPGGDAILNNAGGNSTEGFYGPQHATRVFDMVDEFYIGDL 144

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A6I9RDG8_ELAGV (cytochrome B5-like protein n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9RDG8_ELAGV)

HSP 1 Score: 104 bits (259), Expect = 2.300e-26
Identity = 43/74 (58.11%), Postives = 58/74 (78.38%), Query Frame = 0

Query:   49 RFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDL 122
            + YT+E+V+ HN  +D W+I+KGKVY+ T Y   HPGG+A+L NAG DST+GF G QH  RV+D++DEF+IGDL
Sbjct:   42 KTYTKEEVSVHNKRDDCWIIVKGKVYDVTPYVEEHPGGDAILNNAGGDSTEGFYGPQHATRVFDMVDEFHIGDL 115

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BLAST of Gvermi6493.t1 vs. uniprot
Match: UPI0018AF0B87 (cytochrome B5-like protein n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF0B87)

HSP 1 Score: 104 bits (259), Expect = 2.300e-26
Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 0

Query:   19 VLNRRYRHGGLGGGSPVLAAPQTASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDL 122
            +L  R    GLG G       +T       + +T+E+V+ HN+ ND W+I+K KVY+ T Y   HPGG+A+L++AG DST+GF G QH +RV+D++DEFYIGDL
Sbjct:   18 LLIPRSSSKGLGKGPQPYIVRKTL------KIFTKEEVSLHNTRNDCWIIVKDKVYDVTPYVEEHPGGDAILKHAGGDSTEGFYGPQHASRVFDMVDEFYIGDL 115

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BLAST of Gvermi6493.t1 vs. uniprot
Match: A0A7I8KBF6_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KBF6_SPIIN)

HSP 1 Score: 103 bits (256), Expect = 4.150e-26
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0

Query:   36 LAAPQTASSVGSGRFYTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKGFSGSQHPARVWDLIDEFYIGDL 122
            L      +S  + + YT+ +V+ HNS ND W+I+K KVY+ T Y   HPG +A+L NAG DST+GF G QH  RV+D++DEFYIGDL
Sbjct:   13 LVVASLLASRSTPKTYTKAEVSLHNSRNDCWIIVKDKVYDVTSYVEEHPGADAILNNAGGDSTEGFFGPQHATRVFDMVDEFYIGDL 99

The following BLAST results are available for this feature:

BLAST of Gvermi6493.t1 vs. uniprot

BLAST of Gvermi6493.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IML4_9FLOR	6.280e-65	73.08	Cytochrome B5-like protein n=1 Tax=Gracilariopsis ...	[more]
A0A6V7QVF7_ANACO	6.290e-29	47.22	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A1D1YBG7_9ARAE	9.970e-28	45.30	Cytochrome b5 n=2 Tax=Anthurium amnicola TaxID=167...	[more]
A0A8B9AK67_PHODC	9.970e-28	44.54	cytochrome B5-like protein n=1 Tax=Phoenix dactyli...	[more]
A0A833W3E9_9POAL	1.090e-27	57.32	Cytochrome b5 n=1 Tax=Carex littledalei TaxID=5447...	[more]
A0A0K9P4P9_ZOSMR	1.410e-27	59.21	Cytochrome B5-like protein n=1 Tax=Zostera marina ...	[more]
A0A426YJD6_ENSVE	1.600e-27	46.15	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A6I9RDG8_ELAGV	2.300e-26	58.11	cytochrome B5-like protein n=1 Tax=Elaeis guineens...	[more]
UPI0018AF0B87	2.300e-26	47.12	cytochrome B5-like protein n=1 Tax=Dioscorea cayen...	[more]
A0A7I8KBF6_SPIIN	4.150e-26	51.72	Hypothetical protein n=2 Tax=Spirodela intermedia ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 51..123 e-value: 1.9E-22 score: 90.6
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 52..123 e-value: 2.3E-19 score: 69.3
IPR001199	Cytochrome b5-like heme/steroid binding domain	PROSITE	PS50255	CYTOCHROME_B5_2	coord: 48..123 score: 23.409609
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 47..132 e-value: 6.5E-26 score: 92.2
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 47..127
None	No IPR available	PANTHER	PTHR19359:SF95	CYTOCHROME B5-LIKE PROTEIN	coord: 46..122
None	No IPR available	PANTHER	PTHR19359	CYTOCHROME B5	coord: 46..122
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 38..133
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..37
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..37
None	No IPR available	TMHMM	TMhelix		coord: 4..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_88	contig	ScGOVlb_88:1128488..1129030 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6493.t1	Gvermi6493.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_88 1128488..1129030 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6493.t1 ID=Gvermi6493.t1|Name=Gvermi6493.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=134bp
MITLPLAIIGLLLCICVYVLNRRYRHGGLGGGSPVLAAPQTASSVGSGRF
YTEEDVAAHNSPNDLWLIIKGKVYNFTDYFALHPGGEAMLRNAGRDSTKG
FSGSQHPARVWDLIDEFYIGDLAPPETSDKKGD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001199	Cyt_B5-like_heme/steroid-bd
IPR036400	Cyt_B5-like_heme/steroid_sf