Gvermi6471.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6471.t1
Unique NameGvermi6471.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length343
Homology
BLAST of Gvermi6471.t1 vs. uniprot
Match: A0A2V3ITZ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITZ7_9FLOR)

HSP 1 Score: 395 bits (1016), Expect = 9.620e-135
Identity = 211/336 (62.80%), Postives = 253/336 (75.30%), Query Frame = 0
Query:   18 AAAHRDGQEYTYMSMFVRPESSQPHGGDDNLEQIYRQFSRHEDPFEPKRTSRRQLHANN-DQDED-SEPDAGLDAMDDNDVSDPP----------PEEXXXXXXXXDAARPMSVHVQVPPLPSNEDGNDSQSEPEESSEQIARRFGEDVPRLMKMLKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFKYICIDTNNLILDAVKERVGMTVQSKFIKRKFWKEGLPNVDLVFSWSGLDNMKEGNVLRYLQKLAKSGKKHKLIMLGNHSGSLVKKGDVEKIARFTADGKPLNFRRKPFNLVKPMRMIRDLGIDGNDKQLYLYKPWEMFPKR 341
            AA HR+GQEYTY+SMF+RP+S Q  GGDDNLEQIYRQFS H D   P++ SR QLH+N  D DED +  + G  AMD++D++D            PE+        D+   + V  Q+    S  + +++   PE+  + IA RFGEDV RLM MLKKL+SQY+I+SMADVPCRAHSHWM   LE+IAE NENFKY C+DTNN IL AV++RVGMTV +K+IKRKFWKEGLP VDLVFSWSGLDNMKEGNV+RYL KL  SG+KHKLIMLG+HSG+L + G  E+IARFTADG+P NFRRKPF L KPMR+I DLG DGNDKQLY+YKPWEM+PKR
Sbjct:    5 AAGHRNGQEYTYLSMFLRPDSKQSKGGDDNLEQIYRQFSFHGDTKPPRKASR-QLHSNKEDDDEDGAHSNEGFGAMDESDMADQEEVEEDFPSKAPEQEQSSRSALDSDG-IKVRKQLENHQSTSERSENTDTPEDL-DAIADRFGEDVDRLMMMLKKLVSQYDIRSMADVPCRAHSHWMSDFLETIAEHNENFKYYCVDTNNKILQAVQKRVGMTVDAKYIKRKFWKEGLPKVDLVFSWSGLDNMKEGNVMRYLHKLGGSGRKHKLIMLGSHSGALARSGSAEEIARFTADGEPHNFRRKPFYLAKPMRIIGDLGKDGNDKQLYVYKPWEMYPKR 337          
BLAST of Gvermi6471.t1 vs. uniprot
Match: A0A1X6PF04_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PF04_PORUM)

HSP 1 Score: 117 bits (294), Expect = 1.240e-25
Identity = 72/193 (37.31%), Postives = 103/193 (53.37%), Query Frame = 0
Query:  152 EDVPRLMKMLKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFKYICIDTNNLILDAVKERVGMTVQSKFIKRKFWKEGLPNVDLVFSWSGLDNMKEGNVLRYLQKLAKSGKKHKLIMLGNHSGSLVKKGDVEKIARFTADGK----PLNFRRKPFNLVK-PMRMIRDLGIDG--NDKQLYLYKPWEM 337
            +DV RL  ML ++I  Y IKSM DVPCRAH  WMPQ+L  +  +  +F Y C+D +  ++   +  VG  V   F+ R +W   LP  DLVF+W GLD     +V R L  +  SG K+ L+      GS     D        A GK    P+NFR+ PF L + PMR+I+++ +    + + L LY+  E+
Sbjct:  371 DDVTRLSFMLWRVIKTYHIKSMVDVPCRAHGSWMPQLLARLDYDLPDFHYTCVDASPRVVKGARAAVGDLVDGHFLVRDWWARRLPPADLVFAWRGLDTAPAEHVHRLLSAVPASGAKYLLL------GSADTHNDGHGAG--AAGGKKWVPPINFRKAPFRLPQHPMRVIKEVTLPSAAHSRSLLLYQVAEL 555          
BLAST of Gvermi6471.t1 vs. uniprot
Match: A0A2V3INH4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INH4_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 5.990e-20
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 0
Query:  160 MLKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFKYICIDTNNLILDAVKERVGMTVQSKFIKR 229
            MLKK ISQY+ +SMAD PCRAHSHWM    E+ AE+ +NFKY C DT   IL  V++RVG TV  K++KR
Sbjct:    2 MLKKFISQYDTRSMADAPCRAHSHWMSDFFETNAEQTQNFKYYCFDTIKKILYVVQKRVGTTVDGKYMKR 71          
BLAST of Gvermi6471.t1 vs. uniprot
Match: R7QRJ5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRJ5_CHOCR)

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-9
Identity = 39/111 (35.14%), Postives = 57/111 (51.35%), Query Frame = 0
Query:  142 SSEQIARRFGEDVPRLMKMLKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFKYICIDTNNLILDAVKERVG-----MTVQSKFIKRKFWKEGLPNVDLVFSWSG 247
            S   +  R G ++  L  M+ K+I  Y+IKS+ D+PCR    W P++LE I  E   FKY C+DT++   D ++ +        T+     +  F    LP  DLVFSW G
Sbjct:  294 SGVNLEARDGTNITHLSYMVFKIIKNYDIKSVVDIPCRNTLSWFPKLLERIDFEVAGFKYYCVDTDSYSKDDIQTKFSDAGSPETLHISPEEAHF----LPKTDLVFSWDG 400          
BLAST of Gvermi6471.t1 vs. uniprot
Match: UPI0013D2F264 (class I SAM-dependent methyltransferase n=1 Tax=Dysgonomonas sp. 520 TaxID=2302931 RepID=UPI0013D2F264)

HSP 1 Score: 66.2 bits (160), Expect = 7.380e-9
Identity = 53/175 (30.29%), Postives = 92/175 (52.57%), Query Frame = 0
Query:  161 LKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFKYICIDTNNLILDAVKERVGMTVQSKFIKRKFWKEGLPNVDLVFSWSGLDNMKEGNVLRYLQKLAKSGKKHKLIMLGNHSGSLVKKGDVEKIARFTADGKPLNFRRKPFNLVKPMRMIRDLGI-DG--NDKQLYLY 332
            L ++I +Y I+SM DVPC  ++ WM  +       +    YI  D  + I+++  +++  + +  F      K+ LP VD++F    L ++   NV + L    KSG K+  +++ N+S +  +  D+        D +PLN RRKPF+L KP+   R+  + +G  +DK +YLY
Sbjct:   84 LPQIIEKYRIESMLDVPCGDYN-WMKLV-------DLKCNYIGGDIVSEIIES-NQQLYASDKVNFQVLDITKDDLPKVDMIFCKDCLLHLSYENVAKALNNFKKSGSKY--LLVSNYSRTW-RNHDIHN-----GDYRPLNIRRKPFSLPKPIYRFREKSVAEGVESDKYMYLY 241          
BLAST of Gvermi6471.t1 vs. uniprot
Match: A0A5J4YNM8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNM8_PORPP)

HSP 1 Score: 66.6 bits (161), Expect = 1.850e-8
Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = 0
Query:  151 GEDVPRLMKMLKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFKYICIDTNNLILDAVKERVGMTVQS--KFIKR--KFWKEGLPNVDLVFSWSGLDNMKEGNV 256
            G +V ++  ++ K I Q  +KS+AD PC  ++ WMPQ+L  +  E  NFKY C+D ++  L  ++     T     +FI    + +K    NVD+VFSW+GL    E  +
Sbjct:  298 GVNVTKVSSLMYKWIKQLGVKSLADYPCTDNAVWMPQLLAILDFEIRNFKYYCLDDDHEQLRQLEVSDSFTGAGLPEFIPTDVRHFKHFPTNVDMVFSWNGLQKYAEHGI 407          
BLAST of Gvermi6471.t1 vs. uniprot
Match: A0A2V3IW38_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW38_9FLOR)

HSP 1 Score: 58.2 bits (139), Expect = 5.560e-6
Identity = 51/189 (26.98%), Postives = 85/189 (44.97%), Query Frame = 0
Query:  157 LMKMLKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFKYIC-IDTNNLILDAVK----ERVGMTVQSKFIKRKFWKEGLPNVDLVFSWSGLDNMKEGNVLRYLQKLAKSGKKHKLIML--GNHSGSLVKKGDVEKIARFTADGKPLNFRRKPFNLVKPMRMIRDLGIDGNDKQLYLYKPWEMF 338
            L ++L KLIS + IKSM   PC   + W+   +E++   N NFK+ C I++   ++  +K      +G T  + +  +      LP  DL+FSW GL+     ++    +    S   + ++    G  +  +V  G  E  +   +    LNFR  PF L +  R+I   G      QL +Y    M+
Sbjct:  109 LARLLVKLISFHNIKSMITFPCATETLWIFTFVEAMKGINPNFKHYCVIESYEFVVGMMKTYDRSYLGNTEFAVYSPKGHGS--LPMADLMFSWEGLETWTFDSIFTLFKDAELSSVTYTILKNTPGIENAMMVDNGR-ETYSVVRSSSHALNFRGYPFGLGRAKRVISFHG-----SQLLMYNTTNMW 289          
The following BLAST results are available for this feature:
BLAST of Gvermi6471.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3ITZ7_9FLOR9.620e-13562.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PF04_PORUM1.240e-2537.31Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3INH4_9FLOR5.990e-2060.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QRJ5_CHOCR1.300e-935.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI0013D2F2647.380e-930.29class I SAM-dependent methyltransferase n=1 Tax=Dy... [more]
A0A5J4YNM8_PORPP1.850e-834.55Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V3IW38_9FLOR5.560e-626.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..342
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:864327..865355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6471.t1Gvermi6471.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 864327..865355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6471.t1 ID=Gvermi6471.t1|Name=Gvermi6471.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=343bp
MLRSAAVLLAVLALVCCAAAHRDGQEYTYMSMFVRPESSQPHGGDDNLEQ
IYRQFSRHEDPFEPKRTSRRQLHANNDQDEDSEPDAGLDAMDDNDVSDPP
PEEDQDPAPAPDAARPMSVHVQVPPLPSNEDGNDSQSEPEESSEQIARRF
GEDVPRLMKMLKKLISQYEIKSMADVPCRAHSHWMPQMLESIAEENENFK
YICIDTNNLILDAVKERVGMTVQSKFIKRKFWKEGLPNVDLVFSWSGLDN
MKEGNVLRYLQKLAKSGKKHKLIMLGNHSGSLVKKGDVEKIARFTADGKP
LNFRRKPFNLVKPMRMIRDLGIDGNDKQLYLYKPWEMFPKRK*
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