Gvermi6463.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6463.t1
Unique NameGvermi6463.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length323
Homology
BLAST of Gvermi6463.t1 vs. uniprot
Match: A0A2V3III8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III8_9FLOR)

HSP 1 Score: 348 bits (893), Expect = 1.010e-114
Identity = 178/323 (55.11%), Postives = 235/323 (72.76%), Query Frame = 0
Query:    2 SSSHKLDSVSILVHPNDLRGANHNGVRKENRFARRKCLRMWRRVSVEAAPALVRDRVFYAPDIIHGAQHTSRTPTEFIKATPESPNVVRKGDEFEISFVGMNVTPQDTLACNENELFLYSLYDGEDSSAATQAQEIQHGKG--VAMENGFLVSTEFTNSPSSPRLQRIGSLNSVIAPTSALGGKDLPFIHYDPLRDGRKKGTEPNSYVTIPASMSLYKQFKTGNKESTSGVHKHTSVRFTVLDIDNLTDEQLQILGGVTQLGELVELGAVAVPYVDFISHAFQAVATIGRRSLKKYSQPDHVFSVDIQFLLADAAEPALRDDS 322
            SS+ K +S+SILVHPNDL+G+ +NG+RK NRF+RR C R WRRVSVEAAPA+VRDRVFYAPD  H  + TSRT T++I+ TP+  N+V+KGDEFEISFVGMN++PQD  ACN+NEL LYSL  G DS+    AQ+I       V M+NGF+VS +     S P+++R+ S++S + P  +   KD+PFIHYD   DGR  GT+PN++V IPAS ++YKQF+   +          SVRF VLDID ++DEQ++ + G+TQLG+ VE GAVA+PY + ++ AFQAVA IG+R L+KYS PDHV  VD++F LA++  PA  DDS
Sbjct:    3 SSAPKPNSISILVHPNDLKGSANNGLRKGNRFSRRTCFRRWRRVSVEAAPAMVRDRVFYAPDESHKPESTSRTATQYIRITPDVDNLVKKGDEFEISFVGMNISPQDLFACNKNELVLYSLTSGSDSAKCEWAQKISSANSLKVNMQNGFVVSDQVAPDQSQPKIRRVASIDSRLNPALSTYQKDVPFIHYDTEGDGRTTGTKPNTFVPIPASKAVYKQFRRSCRRREID-DDDISVRFEVLDIDKVSDEQIEAVFGITQLGDFVEKGAVALPYAELVARAFQAVAAIGKRGLRKYSAPDHVLPVDMKFRLANSHMPA-GDDS 323          
BLAST of Gvermi6463.t1 vs. uniprot
Match: A0A2V3ID24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID24_9FLOR)

HSP 1 Score: 140 bits (352), Expect = 3.350e-34
Identity = 100/325 (30.77%), Postives = 167/325 (51.38%), Query Frame = 0
Query:    9 SVSILVHPNDLRGANHNGVRKENRFARRKCLRMWRRVSVEAAPALVRDRVFYAPDIIHGAQ-HTSRTPTEFIKATPES-PNVVRKGDEFEISFVGMNVTPQDTLACNENELFLYSLYDGED------------------SSAATQAQEIQHGKGVAMENGFLVSTEFTNSPSSPRLQRIGSLNSVIAPTSALGGKDLPFIHYDPLRDGRKKGTEPNSYVTIPASMSLYKQFK-TGNKESTSGVHKHTSVRFTVLDIDNLTDEQLQILGGVTQLGELVELGAVAVPYVDFISHAFQAVATIGRRSLKKYSQPDHVFSVDIQFLLAD 312
            ++SI+V    L+ A  + +RK +   R   L   RRV VEA+     D + +AP+  +  + H     TEFIK    +  +VVR  D+FE+SF+G++V  QD +   +NE+ L SL   ED                  S+++  A +    + VA+ +    + E       P  Q+   L+ +        G D+ F+H+DP  DG   G+EP+++  IP +  L+ Q + + +  +  G  +  S+RFTV++ID L +EQL  +  + ++ + V   A +VP + FIS   +   T+GR +LKK ++PDHV S D+ F+LA+
Sbjct:   22 TISIIVLRKSLQSATSDSLRKRDWHERCLPLPTRRRVFVEASEYGTADSILFAPERPNANESHQRVAATEFIKVNQNTCSDVVRHDDDFEVSFIGLSVAQQDYIG--DNEMLLCSLARREDHQEVLEYLASSAYSTINSSNSSVDAHKNGTEEDVAVRSDVGKTNERDGVVPIPPKQKTVDLSDLPTALPIRPG-DVTFLHFDPETDGHDTGSEPDTFTPIPGTKRLFIQRRGSASTLAEGGNVRDVSIRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPILKFISWLLKFANTVGRSALKKVARPDHVMSSDVSFMLAE 343          
BLAST of Gvermi6463.t1 vs. uniprot
Match: A0A2V3IEE2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE2_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 7.500e-32
Identity = 89/266 (33.46%), Postives = 133/266 (50.00%), Query Frame = 0
Query:   77 EFIKATPESPNVVRKGDEFEISFVGMNVTPQDTLAC-----NENELFLYSLYDGEDSSA--ATQAQEIQ-------HGKGVAMENGFLVSTEFTNSPSSPRLQRIGSLNSVIAPTSALGGKDLPFIHYDPLRDGRKKGTEPNSYVTIPASMSLY-------KQFKTGNKESTSGVHKHTSVRFTVLDIDNLTDEQLQILGGVTQLGELVELGAVAVPYVDFISHAFQAVATIGRRSLKKYSQPDHVFSVDIQFLLADAAEPALRDD 321
            E  K  P++ NVVR  DEF ISFVGM+V   D +       ++NEL LYS+    +SS   AT A+E           K V  E    +  E   S ++  L+    L     PT+     D  FIHYDP+ D    GT  +++V +PAS   Y       ++ K   +       K   V+FTV++ID ++D Q + + GV  +G  +   A ++PY+  ++ AF   ++IG+  LK YS+PDHV S D++F LA+A      +D
Sbjct:    5 EMDKVRPDAKNVVRNTDEFVISFVGMSVASHDAVTGLSKHKSDNELLLYSVKCATNSSLPNATIAEEETTQDELELSEKNVDDEGKAELIREKDPSSTAKHLENAEQLK---VPTTFGANNDSVFIHYDPVADAHNTGTLADTFVNVPASKRAYACSKEVLREHKNNQEADDRLCLKKIPVKFTVMEIDKISDMQARAVMGVDHVGSFMSDTAGSIPYIALLTKAFAVGSSIGKHGLKSYSRPDHVLSADVEFCLANAPSDDDNED 267          
The following BLAST results are available for this feature:
BLAST of Gvermi6463.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3III8_9FLOR1.010e-11455.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID24_9FLOR3.350e-3430.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEE2_9FLOR7.500e-3233.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:830342..832777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6463.t1Gvermi6463.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 830342..832777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6463.t1 ID=Gvermi6463.t1|Name=Gvermi6463.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=323bp
MSSSHKLDSVSILVHPNDLRGANHNGVRKENRFARRKCLRMWRRVSVEAA
PALVRDRVFYAPDIIHGAQHTSRTPTEFIKATPESPNVVRKGDEFEISFV
GMNVTPQDTLACNENELFLYSLYDGEDSSAATQAQEIQHGKGVAMENGFL
VSTEFTNSPSSPRLQRIGSLNSVIAPTSALGGKDLPFIHYDPLRDGRKKG
TEPNSYVTIPASMSLYKQFKTGNKESTSGVHKHTSVRFTVLDIDNLTDEQ
LQILGGVTQLGELVELGAVAVPYVDFISHAFQAVATIGRRSLKKYSQPDH
VFSVDIQFLLADAAEPALRDDS*
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