Gvermi6443.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6443.t1
Unique NameGvermi6443.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length128
Homology
BLAST of Gvermi6443.t1 vs. uniprot
Match: A0A2V3IT45_9FLOR (Acyl carrier protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT45_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 3.060e-55
Identity = 93/131 (70.99%), Postives = 106/131 (80.92%), Query Frame = 0
Query:    1 LRSFVGAARLASHQMMRSSIQP----SYVALKATKFHSFTRSFAAEPGFPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            LRS V AAR AS +MMRS++ P    S  +  A+      RSFAAE G+ DK +VS RVLE+VRKFEKVQPEKVT+ SHFVNDLGLDSLDTVELVMALEDEF+IEISDE+AEKIMTCGDAI Y+ADN+HAK
Sbjct:    6 LRSAVNAARFASQRMMRSTVHPCIAVSMYSKHASSIRPMWRSFAAEAGYLDKDEVSTRVLEVVRKFEKVQPEKVTDASHFVNDLGLDSLDTVELVMALEDEFSIEISDEQAEKIMTCGDAIAYVADNIHAK 136          
BLAST of Gvermi6443.t1 vs. uniprot
Match: A0A7R9UK22_DIALT (Acyl carrier protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UK22_DIALT)

HSP 1 Score: 115 bits (288), Expect = 1.120e-30
Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 0
Query:   37 RSFAAEPGFPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            RSFA    F D+ DV+DRVL +V+ FEKV P KVT  SHFV+DLGLDSLDTVE+VMA EDEF +EI D+EAEKI TC DAI +I  + HAK
Sbjct:   44 RSFAT---FLDRADVTDRVLGVVKSFEKVDPAKVTAKSHFVSDLGLDSLDTVEVVMAFEDEFTLEIEDKEAEKIQTCEDAINFICAHPHAK 131          
BLAST of Gvermi6443.t1 vs. uniprot
Match: A0A7S1TI15_9RHOD (Acyl carrier protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI15_9RHOD)

HSP 1 Score: 111 bits (277), Expect = 3.070e-28
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 0
Query:   36 TRSFAAEPGFPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            T   AA  GF  + +V +RVL +VR FEKV P++VT  SHF NDLGLDSLDTVELVMA+E+EF IEI D +A+KI+TC DA+ YI++N +AK
Sbjct:  105 TGDAAASAGFLAQEEVQERVLMVVRNFEKVAPDQVTADSHFTNDLGLDSLDTVELVMAMEEEFAIEIPDADADKILTCKDAVGYISNNPNAK 196          
BLAST of Gvermi6443.t1 vs. uniprot
Match: A0A1X6P9L8_PORUM (Acyl carrier protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9L8_PORUM)

HSP 1 Score: 109 bits (273), Expect = 4.860e-28
Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
Query:   40 AAEPGFPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            +A  G+ DK  V++RVL++V+KFEKV   KVT  SHF  DLGLDSLDTVELVM LEDEF IEI+DE AEKI++  DA+ +IA N +AK
Sbjct:   74 SAPVGYLDKASVTERVLDVVKKFEKVDAAKVTPDSHFTGDLGLDSLDTVELVMGLEDEFAIEIADESAEKIVSVADAVDFIAGNANAK 161          
BLAST of Gvermi6443.t1 vs. uniprot
Match: M1VM39_CYAM1 (Acyl carrier protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VM39_CYAM1)

HSP 1 Score: 108 bits (269), Expect = 7.980e-28
Identity = 57/97 (58.76%), Postives = 69/97 (71.13%), Query Frame = 0
Query:   36 TRSFAAEPG-----FPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            TRS+++E G     F D+ DV +RVL +VR FEKV   KVT  +HFV DL LDSLDTVELVMA EDEF IEI D  AEKI++  DA+ Y+ +N HAK
Sbjct:   33 TRSWSSEAGSGGSVFLDRKDVLERVLNVVRNFEKVDASKVTPDAHFVKDLALDSLDTVELVMAFEDEFAIEIPDAAAEKILSVADAVEYVTNNAHAK 129          
BLAST of Gvermi6443.t1 vs. uniprot
Match: M2Y536_GALSU (Acyl carrier protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y536_GALSU)

HSP 1 Score: 109 bits (272), Expect = 8.090e-28
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0
Query:   47 DKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            D  +V+DRVL +V+KFEKV P KVT  SHFVNDLGLDSLDTVELVMA EDEF IEI D +A+KI++C D I YI+ + +AK
Sbjct:   87 DPKEVADRVLSVVKKFEKVDPSKVTPNSHFVNDLGLDSLDTVELVMAFEDEFAIEIPDSDADKILSCEDMIKYISSHHNAK 167          
BLAST of Gvermi6443.t1 vs. uniprot
Match: UPI00053C27DA (acyl carrier protein 2, mitochondrial-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C27DA)

HSP 1 Score: 106 bits (264), Expect = 4.700e-27
Identity = 60/115 (52.17%), Postives = 75/115 (65.22%), Query Frame = 0
Query:   15 MMRSSIQPSYVALKATKFHSFTRSFAAEP--GFPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            +   SI   + AL    F+   R F+ E    F DK DVSDRV+ +V+ F+KV P KVT  S+F +DLGLDSLDTVE+VMALE+EF  EI D EA+KI T G A+ YIA +  AK
Sbjct:   19 LQNPSISSEHCALP---FNVLLRCFSDEVRGSFLDKSDVSDRVISVVKNFQKVDPSKVTPDSNFQSDLGLDSLDTVEVVMALEEEFGFEIPDNEADKIQTVGHAVEYIASHPQAK 130          
BLAST of Gvermi6443.t1 vs. uniprot
Match: A0A176VPI4_MARPO (Acyl carrier protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VPI4_MARPO)

HSP 1 Score: 106 bits (264), Expect = 5.260e-27
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 0
Query:   47 DKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            DK +V+DRVL LV+K EKV P KV   SHF NDLGLDSLDTVE+VMA E+EF+IEI D EA+KI +C DAI YIA    AK
Sbjct:   54 DKTEVTDRVLALVKKMEKVDPAKVEPTSHFQNDLGLDSLDTVEIVMAFEEEFHIEIPDSEADKIFSCQDAIQYIASQPRAK 134          
BLAST of Gvermi6443.t1 vs. uniprot
Match: A9S5D8_PHYPA (Acyl carrier protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S5D8_PHYPA)

HSP 1 Score: 105 bits (263), Expect = 5.460e-27
Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    7 AARLASHQMMRSSIQPSYVALKATKFHSFTRSFAAEPGFPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            A R A  + M+  +  S+V   A  +     S  A   + DK  V+DRVL +V+K +KV   KVT  +HF NDLGLDSLDTVE+VMA E+EF IEI D +A+KI +CGDAI YIA    AK
Sbjct:    3 AVRAAVLKRMQVGVAASWVQGPAFAYGFRLFSTEAHGTYLDKHVVTDRVLNVVKKMQKVDTAKVTPNAHFQNDLGLDSLDTVEVVMAFEEEFQIEIPDADADKIFSCGDAIEYIASQPRAK 123          
BLAST of Gvermi6443.t1 vs. uniprot
Match: A0A1Y1IJQ9_KLENI (Acyl carrier protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJQ9_KLENI)

HSP 1 Score: 105 bits (263), Expect = 9.320e-27
Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 0
Query:    1 LRSFVGAARLASHQMMRSSIQPSYVALKATKFHSF---------TRSFA--AEPGFPDKGDVSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYIADNVHAK 127
            LR  V AAR +  Q +R  + P+          S           R FA  A+  + DKG V+DRVL +V+ F+KV+P KVT  +HF  DLGLDSLDTVE+VMA E+EF IEI D EA+KI++  DAI ++A +  AK
Sbjct:    5 LRPAVAAARASLLQHLRVGVTPALHTAGGLPGQSVFDGLCSILAPRYFADAAKGTYLDKGQVTDRVLSVVKNFQKVEPSKVTPTAHFTKDLGLDSLDTVEVVMAFEEEFGIEIPDSEADKILSTADAIEFVASHPQAK 142          
The following BLAST results are available for this feature:
BLAST of Gvermi6443.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IT45_9FLOR3.060e-5570.99Acyl carrier protein n=1 Tax=Gracilariopsis chorda... [more]
A0A7R9UK22_DIALT1.120e-3065.93Acyl carrier protein n=2 Tax=Diacronema lutheri Ta... [more]
A0A7S1TI15_9RHOD3.070e-2860.87Acyl carrier protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6P9L8_PORUM4.860e-2862.50Acyl carrier protein n=1 Tax=Porphyra umbilicalis ... [more]
M1VM39_CYAM17.980e-2858.76Acyl carrier protein n=1 Tax=Cyanidioschyzon merol... [more]
M2Y536_GALSU8.090e-2866.67Acyl carrier protein n=2 Tax=Galdieria sulphuraria... [more]
UPI00053C27DA4.700e-2752.17acyl carrier protein 2, mitochondrial-like n=1 Tax... [more]
A0A176VPI4_MARPO5.260e-2766.67Acyl carrier protein n=2 Tax=Marchantia polymorpha... [more]
A9S5D8_PHYPA5.460e-2749.59Acyl carrier protein n=1 Tax=Physcomitrium patens ... [more]
A0A1Y1IJQ9_KLENI9.320e-2745.65Acyl carrier protein n=1 Tax=Klebsormidium nitens ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)TIGRFAMTIGR00517TIGR00517coord: 50..123
e-value: 8.2E-28
score: 94.1
IPR003231Acyl carrier protein (ACP)PANTHERPTHR20863ACYL CARRIER PROTEINcoord: 19..125
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 50..124
score: 18.551611
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 53..118
e-value: 4.6E-12
score: 46.1
IPR009081Phosphopantetheine binding ACP domainPROSITEPS50075CARRIERcoord: 49..124
score: 22.173056
IPR036736ACP-like superfamilyGENE3D1.10.1200.10coord: 47..127
e-value: 5.6E-29
score: 102.2
IPR036736ACP-like superfamilySUPERFAMILY47336ACP-likecoord: 48..124
NoneNo IPR availablePANTHERPTHR20863:SF64ACYL CARRIER PROTEIN, MITOCHONDRIALcoord: 19..125
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 79..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:772469..772953 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6443.t1Gvermi6443.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 772469..772953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6443.t1 ID=Gvermi6443.t1|Name=Gvermi6443.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=128bp
LRSFVGAARLASHQMMRSSIQPSYVALKATKFHSFTRSFAAEPGFPDKGD
VSDRVLELVRKFEKVQPEKVTEGSHFVNDLGLDSLDTVELVMALEDEFNI
EISDEEAEKIMTCGDAITYIADNVHAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003231Acyl_carrier
IPR009081PP-bd_ACP
IPR036736ACP-like_sf
IPR006162Ppantetheine_attach_site