Gvermi6408.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6408.t1
Unique NameGvermi6408.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length233
Homology
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A2V3IFC9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC9_9FLOR)

HSP 1 Score: 247 bits (631), Expect = 1.520e-77
Identity = 109/174 (62.64%), Postives = 131/174 (75.29%), Query Frame = 0
Query:   59 MDKKAHKENAFHYSCWGAKPVVAKPSELVT-RKGFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEG-RILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKGRYQKPAPFKYGAQPAPLTPANF 230
            M+K  H+ NAFHYSCWGA PV A   EL   R GFTF+GSDG+QH   KGYY   V+IP C+PDGNYV+GWVW+GG  G +I  N PQ+PK  GYFGDYW+C+FVRV+GG PL+ S  PVF+NDM+Q+S++GCM+AN+ PG C  EPC+V G YQKP PF  G  PAPLTP NF
Sbjct:    1 MEKAVHQHNAFHYSCWGANPVQASSDELEKDRYGFTFVGSDGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWGYFGDYWACSFVRVEGGDPLSASYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNF 174          
BLAST of Gvermi6408.t1 vs. uniprot
Match: R7QEV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 221 bits (564), Expect = 2.310e-67
Identity = 96/174 (55.17%), Postives = 116/174 (66.67%), Query Frame = 0
Query:   58 IMDKKAHKENAFHYSCWGAKPVVAKPSELVTRK-GFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKGRYQKPAPFKYGAQPAPLTPANF 230
            +MDK AH +NAF+Y+CWGA P  A  +E+   + GF+F+GSDG+QH   KGYY+  V IP  VPDG YVLGWVWYGG  G   GN  Q+P   GYFGDYWSC++V + GG  L     PVF NDM+ +S  GCM+AND PG+C  EPC+V   YQ P PFK G  P  LTP  F
Sbjct:   52 MMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGSAEGNVQQEPTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGVCSYEPCRVDSEYQAPRPFKDGNVPEDLTPEQF 225          
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A2V3IUR8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 215 bits (548), Expect = 7.870e-67
Identity = 94/174 (54.02%), Postives = 120/174 (68.97%), Query Frame = 0
Query:   59 MDKKAHKENAFHYSCWGAKPVVAKPSELVT-RKGFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVE-GRILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKGRYQKPAPFKYGAQPAPLTPANF 230
            M K  H  NAFHYSCWGA    A P+EL T R GF F+G+DG+ H   + YY +  ++P CVPDG Y+LGWVW+GG   G I  N P++P  +G+F DYW+C++VR++GG  L  SC+PVF NDM QFS  GCMA ND PG+C  EPC  +G Y+KP PFK G++P  LTP+ F
Sbjct:   75 MSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDNRPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGVCSYEPCISEGFYRKPQPFKDGSKPPSLTPSLF 248          
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A2V3IS62_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 5.540e-66
Identity = 119/285 (41.75%), Postives = 145/285 (50.88%), Query Frame = 0
Query:   12 MSSFSVMKFCCMLFLACEMAF--AHSTMTDPQSISPGTCRLGGEPQFGI--------------------------------------------------------------MDKKAHKENAFHYSCWGAKPVVAKPSEL-VTRKGFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRIL-GNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKGRYQKPAPFKYGAQPAPLTPANF 230
            M+S +V     +  L C+ A   AHS MT PQS SP TCRLGGE Q GI                                                              MD+ AH  NAFHYSCWGA PV A+P+EL     GFT  GSDG QH   KGYY+  ++IP  +PDG+YVLGW WYGG  G +  G +PQ P +  YFGDY+SC+FV+V+GG+   Q+  P F NDM QFS  GCM++ D  G C REPC     +++P  F  G  P PLTPA F
Sbjct:    1 MTSATVAMISFVFLLVCQTALVSAHSQMTQPQSTSPKTCRLGGEAQHGIDNCRGPCDLRPIHAKRRYANFWNPAHPAATYSRGQRVTIKYTRNNHAPGGFIRMTFVRPSQIMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGGE-YTQTYKPKFINDMAQFSNAGCMSSTDNLGNCAREPCHKPAFFRRPRQFADGRHPPPLTPALF 284          
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A2V3IBQ8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBQ8_9FLOR)

HSP 1 Score: 152 bits (384), Expect = 7.190e-41
Identity = 78/179 (43.58%), Postives = 102/179 (56.98%), Query Frame = 0
Query:   59 MDKKAHKENAFHYSCWGAK------PVVAKPSELVTRKGFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEG-RILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKGRYQKPAPFKYGAQPAPLTPANF 230
            M+K  H+ NAFH    G +      P+ +K  + V+          G+QH   KGYY   V+IP C+PDGNYV+GWVW+GG  G +I  N PQ+PK                + G    +   PVF+NDM+Q+S++GCM+AN+ PG C  EPC+V G YQKP PF  G  PAPLTP NF
Sbjct:    1 MEKAVHQHNAFHLQLLGRQFQFKRHPMSSKRIDTVS-----LCWQHGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWVILATIGHVRSFASKVGSTF-RLYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNF 173          
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A1X6P3E1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3E1_PORUM)

HSP 1 Score: 114 bits (285), Expect = 1.130e-25
Identity = 65/187 (34.76%), Postives = 91/187 (48.66%), Query Frame = 0
Query:   46 GTCRLGGEPQFGIMDKKAHKENAFHYSCWGAKPVVAKPSELVTRKGFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKG--RYQKPAPFKYGAQPAPLTPANF 230
            G  R    P   + D  +H+ NAFH+SCW       K   +   +   F        D +   +  ++ IP+ +PDG+YVLGW WYGG EG +         +Q  FGDY+ C++VRV+GG PLA    P F  D        C++  + PGIC REPC      R + P  F+ G  P P+  +NF
Sbjct:  105 GIVRWAMVPVSEMWDMGSHERNAFHWSCWNINRF--KCGAMDHNRDCYF--------DTSNMAFKDQLRIPNNLPDGDYVLGWTWYGGGEGPV--------GKQAIFGDYYDCSYVRVEGGNPLADKHIPTFSGDATGT----CLSTVNRPGICKREPCAPMPYVRRRVPVEFEGGRHPPPIYASNF 269          
BLAST of Gvermi6408.t1 vs. uniprot
Match: R7QJR3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR3_CHOCR)

HSP 1 Score: 112 bits (280), Expect = 1.370e-25
Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 0
Query:   46 GTCRLGGEPQFGIMDKKAHKENAFHYSCWGAKPVVAKPSELVTRKGFTFIGSDGKQ---HDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCK 205
            G  RL   P   +MD +AHK+  F  SCW +              G     S  K    +D+    Y A +++P   PDG YVLGW WYGG +           K   +FGDY+SC+FVR++GG  L+ S  PVF   +N   + GC+++ D  G+C REPC+
Sbjct:   91 GFVRLTLVPVDKMMDSRAHKKFTFQISCWSS--------------GLHKCKSRNKHVCGNDKEGMAYRAPITVPTAYPDGIYVLGWAWYGGGD----------FKHDSFFGDYYSCSFVRIEGGARLSSSSKPVFAPGLNTKHRDGCLSSTDRVGVCKREPCR 229          
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A2V3IQV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV8_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 1.130e-24
Identity = 63/167 (37.72%), Postives = 81/167 (48.50%), Query Frame = 0
Query:   61 KKAHKENAFHYSCWGAKPVVAKPSELVTRKGFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKGRYQK--PAPFKYGAQPAPL 225
            K  H + AFHY+CW             T   F F       +D     Y   + IP   PDG+YVLGW WYGG  G             G+FGDY+ CA+VRV GG+P+ +S  P F        + GC A  D+ GIC +EPC+   + +K  PAPFK G  P P+
Sbjct:  103 KHWHAKMAFHYNCWSVG--------RFTCNDFDF--HRDCHYDRQNEAYSKMLYIPPVFPDGDYVLGWTWYGGGVGY------------GHFGDYYDCAYVRVSGGEPVQESYVPTFSAGGGSTYEDGCEATVDDLGICWKEPCRPMRKTEKRVPAPFKDGKTPQPI 247          
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A1X6PKH5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKH5_PORUM)

HSP 1 Score: 103 bits (257), Expect = 1.470e-22
Identity = 58/163 (35.58%), Postives = 78/163 (47.85%), Query Frame = 0
Query:   64 HKENAFHYSCWGAKPVVAKPSELVTRKGFTFIGSDGKQHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKVKGRYQK-PAPFKYGAQPAPL 225
            HK+ AFHY C+ + P   K        G+          DE    +   V +P  +P+G YVLGW WYGG+      N P      GY+GDY+SC++VR+ GG PL+ S  P +    +   K  C  +    G CP EPC    R  + P  F+ GA P PL
Sbjct:   65 HKKYAFHYQCFRSDPFTCKTKTERLVDGW---------FDEKNVAFKTHVKVPRNIPNGIYVLGWAWYGGLHT----NMPWT----GYYGDYYSCSYVRIHGGGPLSWSHQPTWWTGRSSLFKNVCETSTTRIGECPSEPCVDHPRQLRVPEEFESGAVPPPL 210          
BLAST of Gvermi6408.t1 vs. uniprot
Match: A0A1X6PIU7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIU7_PORUM)

HSP 1 Score: 104 bits (259), Expect = 2.020e-22
Identity = 63/178 (35.39%), Postives = 93/178 (52.25%), Query Frame = 0
Query:   58 IMDKKAHKENAFHYSCWGAKPVVAKPSELVTRKGFTFIGSDGK---QHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRILGNTPQKPKQQGYFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICPREPCKV--KGRYQKPAPFKYGAQPAPLTPANF 230
            + +K AH++ AFH+SCW            + R  FT    D +   Q+D     +   + IP  +P+G+YVLGW WYGG  GR  G          +FGDY+ C++VRV+GGKPL +   P        F+ +GC A  + PG+C  EPC+   K  +++PA F  G  P P+  ++F
Sbjct:  126 MNNKAAHQKFAFHWSCWN-----------INR--FTCNRMDHQRDCQYDRNNKAFKDHIRIPANLPNGDYVLGWSWYGG--GRTGGRA--------HFGDYFDCSYVRVEGGKPLQEKHIPT-------FAGRGCHATVNRPGVCKSEPCRPLRKVTFKRPAEFD-GRTPPPIYASSF 272          
The following BLAST results are available for this feature:
BLAST of Gvermi6408.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A2V3IFC9_9FLOR1.520e-7762.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEV6_CHOCR2.310e-6755.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IUR8_9FLOR7.870e-6754.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS62_9FLOR5.540e-6641.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBQ8_9FLOR7.190e-4143.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P3E1_PORUM1.130e-2534.76Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QJR3_CHOCR1.370e-2536.20Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IQV8_9FLOR1.130e-2437.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PKH5_PORUM1.470e-2235.58Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PIU7_PORUM2.020e-2235.39Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:494292..495475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6408.t1Gvermi6408.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 494292..495475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6408.t1 ID=Gvermi6408.t1|Name=Gvermi6408.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=233bp
MVTHSPDLHRKMSSFSVMKFCCMLFLACEMAFAHSTMTDPQSISPGTCRL
GGEPQFGIMDKKAHKENAFHYSCWGAKPVVAKPSELVTRKGFTFIGSDGK
QHDEAKGYYIARVSIPDCVPDGNYVLGWVWYGGVEGRILGNTPQKPKQQG
YFGDYWSCAFVRVQGGKPLAQSCNPVFKNDMNQFSKKGCMAANDEPGICP
REPCKVKGRYQKPAPFKYGAQPAPLTPANFYY*
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