Gvermi6400.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6400.t2
Unique NameGvermi6400.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length255
Homology
BLAST of Gvermi6400.t2 vs. uniprot
Match: A0A2V3IRV8_9FLOR (Condensin-2 complex subunit H2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRV8_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 1.160e-75
Identity = 141/256 (55.08%), Postives = 172/256 (67.19%), Query Frame = 0
Query:    1 MRR--GSPTAVIFDENREMFEDLEEEEDMMGMGVNTVTFDVDDDEEVDVAACAGVDEDGPEGVGDADDATNDVVHLADDCDSRSIYPDQLRQLASSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEIVPAGRCCVSDPTLRLIRHTAR-AVTPVKSRCKRSRQVGGTPLSAKRPPLRQRLD 253
            MRR   SPT + FDE  ++  D+EEEED+  M +NTVTF  D++EE+++     +DE G   VG  +    D +       S  +Y DQL +LASSYEETCR+YLERTRGLWEQHSVDA++AKRV +W S+IQPILD+EE+RPEFDIAAYGQ IL   + A  +    E  MS +F GC  YDVCR+FLATLQLAN YS+EIVP   CCVS+PTLRL+R     A TPVKSR KR+RQ G T           RLD
Sbjct:  385 MRRKASSPTGITFDEENDVLADMEEEEDLDEMRLNTVTFGADEEEEIEMPPFPELDEPG---VGMDEAPITDAIPTVSGRRSSGVYQDQLHKLASSYEETCRRYLERTRGLWEQHSVDAKLAKRVENWASKIQPILDDEEKRPEFDIAAYGQVILQGVKKAQAKGGVTEIPMSRLFEGCAAYDVCRKFLATLQLANTYSIEIVPPQECCVSNPTLRLLREVQEHAKTPVKSRSKRARQAGDTXXXXXXXXXXXRLD 637          
BLAST of Gvermi6400.t2 vs. uniprot
Match: R7Q4L3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4L3_CHOCR)

HSP 1 Score: 107 bits (268), Expect = 5.160e-23
Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 0
Query:   86 DQLRQLASSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEIVPAGRCCVSD 210
            D    +A   EET R++LER   LW+Q +VD ++ KRV  W SRIQP+L+EEE RP+FDI+ Y + IL        ++H  +  +S +      ++VCR+FLA LQLAN Y +EI  +  C V D
Sbjct:  386 DGFGSVAPGLEETYREHLERIASLWKQRTVDTDMVKRVEQWTSRIQPLLEEEEHRPKFDISCYEREILSDLNGIVKQKHVFKTRVSMLIREPARFEVCRKFLAMLQLANSYDIEIQSSEGCHVED 510          
BLAST of Gvermi6400.t2 vs. uniprot
Match: A0A7S1UVB8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UVB8_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.820e-17
Identity = 47/124 (37.90%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   94 SYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRD-----AADRQHA--------AEAAMSAVFG----GCETYDVCRQFLATLQLANCYSLEI 200
            ++E+ CR ++ +     E+++V+  +++R+ +W+SR+ P L+EEERRPEFDI  YG+R++   ++     + D +HA        AE   +  FG    GCE Y+VCR FLATL LAN  ++ I
Sbjct:   62 AFEDLCRSHIRKFAKGAEKYAVETNLSRRIGTWQSRLAPKLEEEERRPEFDIRVYGKRVIDAAQEELEKLSGDVKHAKRKGCLTDAETRKTVSFGSVTRGCEQYEVCRLFLATLGLANDANVRI 185          
BLAST of Gvermi6400.t2 vs. uniprot
Match: UPI00138FB64E (condensin-2 complex subunit H2 isoform X2 n=5 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FB64E)

HSP 1 Score: 88.2 bits (217), Expect = 3.120e-16
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = 0
Query:   91 LASSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEIVPAG 204
            + SSYE+  RKY+E      +Q++ + +++KRV +WE++I P L+EEE+   FDI  YG+ +L  F+D            + +    E +++CR FLATLQLAN Y++EI  AG
Sbjct:  493 VVSSYEDLVRKYVEGYLMEAQQYAQETDLSKRVRTWENKILPTLEEEEKHAPFDIHKYGEDVLHSFQDIFSIAEERVKPFAEIMKSKEPFEICRYFLATLQLANNYNVEISVAG 606          
BLAST of Gvermi6400.t2 vs. uniprot
Match: UPI000C6E2F7D (condensin-2 complex subunit H2-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E2F7D)

HSP 1 Score: 84.3 bits (207), Expect = 6.320e-15
Identity = 52/132 (39.39%), Postives = 73/132 (55.30%), Query Frame = 0
Query:   82 SIYPDQLRQLASSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEIVPAGRCCVSDPTL 213
            S+ P+ + Q+ SSYE   +KY+E       Q+    E+A+RV  WE +IQP L EEE+   FDI  YG RIL  +RD   +Q       S V    + +++CR FLATLQLAN Y++ I    +    + TL
Sbjct:  468 SVKPENI-QVVSSYETLVQKYVENYLSSAAQYCQITELARRVNEWEDKIQPKLQEEEKHEPFDIHVYGTRILDFYRDNNRKQ---TVNFSTVCKKKKRWEICRYFLATLQLANNYNVHITSGEKMDTMELTL 595          
BLAST of Gvermi6400.t2 vs. uniprot
Match: A0A7S1EEY7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EEY7_HEMAN)

HSP 1 Score: 80.1 bits (196), Expect = 1.160e-14
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 0
Query:   89 RQLASSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEI 200
            R+ A +YE+ CRKY+E+     E     + +  RV  W+++++P L EEERR  FDI  YG ++    +  + R    E   SA   G + YDVCR FLATLQLAN  ++E+
Sbjct:   16 RERAVAYEDMCRKYVEKYLKGVENFIQASGLEARVNEWQAKLEPKLQEEERREAFDIHTYGDKVK---QLVSKRSTEHEVPFSAAVAGMQKYDVCRAFLATLQLANDGNVEL 124          
BLAST of Gvermi6400.t2 vs. uniprot
Match: UPI001CF3DEB9 (condensin-2 complex subunit H2-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF3DEB9)

HSP 1 Score: 83.2 bits (204), Expect = 1.580e-14
Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 0
Query:   91 LASSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEIVPAGRCCVSDPTLRLIRHTARAVTP 225
            + SSYEE  R+Y++      +Q   + ++++RV  WE RI P+L +EE    FDI  YG+ I+  F+   ++      A   +  G E +++CR FLATLQLAN Y++EI   G   V + ++  ++     VTP
Sbjct:  490 IVSSYEELVRQYVDGYLFEAQQFVKETDLSRRVRDWEERILPVLSKEETHRPFDIHKYGEEIMASFKGKCNQ------AFKELVNGKEAFEICRLFLATLQLANNYNVEITADG---VGEKSVDTMKLRLMKVTP 615          
BLAST of Gvermi6400.t2 vs. uniprot
Match: UPI0009E57569 (condensin-2 complex subunit H2-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E57569)

HSP 1 Score: 81.6 bits (200), Expect = 4.130e-14
Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 0
Query:   93 SSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEIVP--AGRCCVSDPTLRLIRHT 219
            SSYEE  R+Y+E      +Q++ + E+++RV  WE RI P+L +E+    FDI  YG+ IL  F+   ++   A A         E +++CR FLATLQLAN Y++EI     G   V    L+L++ T
Sbjct:  307 SSYEEMVRQYVEGYLTEAQQYAQETELSRRVRDWEERIVPVLAQEDTHRPFDIHKYGEEILHSFKGKCNQDFKALANKK------EPFEICRLFLATLQLANNYNVEISADGVGEEAVDTMRLKLLKTT 429          
BLAST of Gvermi6400.t2 vs. uniprot
Match: A0A7S0ENT4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ENT4_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 4.940e-14
Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 0
Query:   91 LASSYEETCRKYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAADR----------QHAAEAAM-----SAVFGGCETYDVCRQFLATLQLANCYSLEIVPAG 204
            LA SYEE+CR +LE    +   +  D  + +RV+ W +R+ P+L+EE  R EFDI  YG R+L  F DA++R            A EA++     +A  G  E ++VCR FLA LQL N  +L++V +G
Sbjct:  129 LALSYEESCRAHLESCLEVSAGYHEDLALHRRVSEWRARVTPLLEEEGFRKEFDIGEYGDRLLNNF-DASERVGRGAKQSKRSDAGEASVLCFSEAAQCG--EKFEVCRMFLAALQLTNQGNLDLVTSG 254          
BLAST of Gvermi6400.t2 vs. uniprot
Match: A0A3M6V279_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V279_POCDA)

HSP 1 Score: 80.9 bits (198), Expect = 9.390e-14
Identity = 52/133 (39.10%), Postives = 75/133 (56.39%), Query Frame = 0
Query:   93 SSYEETCRKYLER-TRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQRILGRFRDAAD---RQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEIVP--AGRCCVSDPTLRLIRHT 219
            SSYEE  RKY++       +Q++ + E+++RV  WE RI P+L EEE    FDI  YG+ I+  F+  ++   RQ A E          E +++CR FLATLQLAN Y++EI     G   V    L+L++ T
Sbjct:  444 SSYEEMVRKYVDSYLLEARQQYAQETELSRRVREWEERIVPVLTEEETHRPFDIHKYGEEIIDSFKGNSNQDFRQLAHEK---------EPFEICRFFLATLQLANNYNVEITADGVGEKAVDTMRLKLLKRT 567          
The following BLAST results are available for this feature:
BLAST of Gvermi6400.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRV8_9FLOR1.160e-7555.08Condensin-2 complex subunit H2 n=1 Tax=Gracilariop... [more]
R7Q4L3_CHOCR5.160e-2343.20Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1UVB8_9STRA5.820e-1737.90Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
UPI00138FB64E3.120e-1639.47condensin-2 complex subunit H2 isoform X2 n=5 Tax=... [more]
UPI000C6E2F7D6.320e-1539.39condensin-2 complex subunit H2-like n=1 Tax=Centru... [more]
A0A7S1EEY7_HEMAN1.160e-1440.18Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
UPI001CF3DEB91.580e-1434.81condensin-2 complex subunit H2-like isoform X1 n=3... [more]
UPI0009E575694.130e-1437.98condensin-2 complex subunit H2-like n=1 Tax=Orbice... [more]
A0A7S0ENT4_9EUKA4.940e-1439.53Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A3M6V279_POCDA9.390e-1439.10Uncharacterized protein n=2 Tax=Pocillopora damico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031737Condensin-2 complex subunit H2, C-terminalPFAMPF16858CNDH2_Ccoord: 52..204
e-value: 1.3E-30
score: 107.3
IPR031739Condensin-2 complex subunit H2PANTHERPTHR14324CONDENSIN-2 COMPLEX SUBUNIT H2coord: 13..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:474780..475544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6400.t2Gvermi6400.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 474780..475544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6400.t2 ID=Gvermi6400.t2|Name=Gvermi6400.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=255bp
MRRGSPTAVIFDENREMFEDLEEEEDMMGMGVNTVTFDVDDDEEVDVAAC
AGVDEDGPEGVGDADDATNDVVHLADDCDSRSIYPDQLRQLASSYEETCR
KYLERTRGLWEQHSVDAEVAKRVASWESRIQPILDEEERRPEFDIAAYGQ
RILGRFRDAADRQHAAEAAMSAVFGGCETYDVCRQFLATLQLANCYSLEI
VPAGRCCVSDPTLRLIRHTARAVTPVKSRCKRSRQVGGTPLSAKRPPLRQ
RLDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031737CNDH2_C
IPR031739Ncaph2