Gvermi6389.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6389.t1
Unique Name	Gvermi6389.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	210

Homology

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BLAST of Gvermi6389.t1 vs. uniprot
Match: A0A2V3IXK7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK7_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 2.610e-44
Identity = 82/167 (49.10%), Postives = 115/167 (68.86%), Query Frame = 0

Query:   40 KKSASNPGVNAEQFRDLFRAPQGKMRQPRYKLRWDWHLRNFLTALIPPAAMLVFFRVLAMLDSPEIQLYEARFEGKDPITGKISTLKSPDEDPTSDPHVKQAPEEELHIFLRNLLKDRLKPIEEELERLRSVTSELLRDALESEEAIKRIEDARRHSKRMVRPAVEK 206
            ++ ASNPGVN EQF+ LFR  +GK+R PRYKLRWDWHLRNFLTALIPP AML+F+++++M     ++LY+ARFEG DPITGKI    +P+   T+D   +    EEL   L+  +++RL+ +E+E+ERL++  +   +      E   R+E AR+ SKRMVR   +K
Sbjct:   37 RQLASNPGVNIEQFKALFRPVEGKLRHPRYKLRWDWHLRNFLTALIPPGAMLIFYKIVSMFGDSALELYDARFEGMDPITGKIRGPSTPEPGATADLPTEITSREELITLLQKPMQERLRQLEDEIERLKARATAQEQKLEAKAEFSNRVERARQLSKRMVRSGSKK 203

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BLAST of Gvermi6389.t1 vs. uniprot
Match: R7QRZ5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRZ5_CHOCR)

HSP 1 Score: 66.2 bits (160), Expect = 6.440e-10
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0

Query:   42 SASNPGVNAEQFRDLF-RAPQGKMR---QPRYKLRWDWHLRNFLTALIPPAAMLVFFRVLAMLDSPEIQLYEARFE 113
            +A+NPGV A QFR LF  +P    R   +PR+  RWDWHLRNFL ALIPPA +L+F RV       +  +Y+  F+
Sbjct:   34 AATNPGVTAAQFRALFDTSPASTARGRARPRH-FRWDWHLRNFLMALIPPAVLLLFLRVATYQFGGDHAIYDKIFD 108

The following BLAST results are available for this feature:

BLAST of Gvermi6389.t1 vs. uniprot

BLAST of Gvermi6389.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IXK7_9FLOR	2.610e-44	49.10	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QRZ5_CHOCR	6.440e-10	48.68	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..51
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 101..209
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 80..100
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..79
None	No IPR available	TMHMM	TMhelix		coord: 75..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_88	contig	ScGOVlb_88:419648..420277 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6389.t1	Gvermi6389.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_88 419648..420277 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6389.t1 ID=Gvermi6389.t1|Name=Gvermi6389.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=210bp
MMLKLRRCTYPLQQVLLREVCDRAPERQLSSKPYAPRGGKKSASNPGVNA
EQFRDLFRAPQGKMRQPRYKLRWDWHLRNFLTALIPPAAMLVFFRVLAML
DSPEIQLYEARFEGKDPITGKISTLKSPDEDPTSDPHVKQAPEEELHIFL
RNLLKDRLKPIEEELERLRSVTSELLRDALESEEAIKRIEDARRHSKRMV
RPAVEKETD*