Gvermi6243.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6243.t1
Unique NameGvermi6243.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length223
Homology
BLAST of Gvermi6243.t1 vs. uniprot
Match: A0A2V3IDC2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC2_9FLOR)

HSP 1 Score: 258 bits (660), Expect = 2.860e-84
Identity = 131/218 (60.09%), Postives = 163/218 (74.77%), Query Frame = 0
Query:   11 IASVSYSTAQT-----TVDMCPNRCNPNRATSERECSNSVTNGVCAVASCTNP---QNGFACEVPEDSFIIANIHLPAVELVLEYSWGNSQSDLDTSTRFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGSTSVDALAGWHGSDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCATTEVGTVEISSAQHHTRFTL 220
            I S+ ++ A T     TVDMCPNRCN NR  S+RECS +VT GVCAV SC+ P   + GF C++P++SFIIAN +LP +E V+EYSW ++QSDLDTSTRFL+ NVGF CSP+ +Y+ FSGD+   GG ET+ ID+  A  +   SGSTSV A AGWHGS++EGD TLK +LR+KSD   + GA+LSST+SPGTQN CA T VGTV+I  AQHHTRF L
Sbjct:    8 IVSLFFALAATAFAIQTVDMCPNRCNANRPMSQRECSLAVTRGVCAVESCSPPAYNRTGFICKMPQNSFIIANTNLPQLEFVVEYSWSSTQSDLDTSTRFLDANVGFRCSPDKDYIAFSGDDVSSGGKETITIDVMEAFEEYQLSGSTSVAAFAGWHGSENEGDATLKVFLRKKSDQALISGAVLSSTISPGTQNGCAATAVGTVQIIRAQHHTRFAL 225          
BLAST of Gvermi6243.t1 vs. uniprot
Match: A0A2V3J5L0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L0_9FLOR)

HSP 1 Score: 257 bits (656), Expect = 1.020e-83
Identity = 126/202 (62.38%), Postives = 155/202 (76.73%), Query Frame = 0
Query:   22 TVDMCPNRCNPNRATSERECSNSVTNGVCAVASCTNP---QNGFACEVPEDSFIIANIHLPAVELVLEYSWGNSQSDLDTSTRFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGSTSVDALAGWHGSDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCATTEVGTVEISSAQHHTRFTL 220
            TVDMCPNRCN NRA S+RECS +VT GVC+V SC+ P   Q GF C +P +SFII N +LP +E V+EYSW +SQSDLDTSTRFL+ NVG+SCSP+  Y+ FSGD+  +GG E++ ID+  A  +   SGSTSV   AGWHG++DEGD TLK +LR+KSD   +PGA+LSST++PGTQ  CA T VGTV+I  AQHHTRFTL
Sbjct:   20 TVDMCPNRCNTNRAMSQRECSVAVTRGVCSVDSCSPPAYNQTGFICRMPRNSFIIPNTNLPLLEFVVEYSWSSSQSDLDTSTRFLDANVGYSCSPDKNYVAFSGDDVSYGGKESITIDVLEAFEEYQLSGSTSVATFAGWHGNEDEGDATLKVFLRKKSDLALIPGAVLSSTINPGTQYGCAATAVGTVQIVRAQHHTRFTL 221          
BLAST of Gvermi6243.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 206 bits (523), Expect = 1.380e-63
Identity = 107/213 (50.23%), Postives = 140/213 (65.73%), Query Frame = 0
Query:   10 LIASVSYSTAQ-TTVDMCPNRCNPNRATSERECSNSVTNGVCAVASCTNPQNGFACEVPEDSFIIANIHLPAVELVLEYSWGNSQSDLDTSTRFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGSTSVDALAGWHGSDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCATTEVGTVEISSAQHHTRFTLQ 221
            L+ASV    AQ  + D+CPNRCN +R  S+REC + VT  +CAV  C +  NG++C +P +SF+I+N  L  +E V+EY+W   Q DLDTSTRFL+GNVGFSCS  N+YL+F GDNT  GG E  VID+  A  DG W  ST++ + AGW  SD++G   +K YLRRKSD G    A +S  ++PGTQ  C+   V TV+I     HTR TL+
Sbjct:    9 LLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECED--NGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLE 219          
BLAST of Gvermi6243.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 177 bits (448), Expect = 1.520e-51
Identity = 88/184 (47.83%), Postives = 121/184 (65.76%), Query Frame = 0
Query:   38 ERECSNSVTNGVCAVASCTNPQNGFACEVPEDSFIIANIHLPAVELVLEYSWGNSQSDLDTSTRFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGSTSVDALAGWHGSDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCATTEVGTVEISSAQHHTRFTLQ 221
            +REC++ VT  VCAV  C N  NG++C +  +SF+I+N  LP +E V+EY+W   Q DLD STRFL+GNVGF C+  N+YL+F GDNT  G  E VVID+  A  D  W  ST++ + A W  SD++G   ++ YLRRKSD G    A +S  ++PGTQ+NC++ +V  V+I     HTR TL+
Sbjct:   93 DRECNHPVTRSVCAVEECEN--NGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLE 274          
BLAST of Gvermi6243.t1 vs. uniprot
Match: A0A2V3IS11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 149 bits (375), Expect = 3.350e-41
Identity = 83/200 (41.50%), Postives = 115/200 (57.50%), Query Frame = 0
Query:   24 DMCPNRCNPNRATSERECSNSVTNGVCAVASCT---NPQNGFACEVPEDSFIIANIHLPAVELVLEYSWGNSQSDLDTSTRFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGSTSVDALAGWHGSDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCATTEVGTVEISSAQHHTRFTL 220
            D+CPN+C  N     REC  S    +C+V  C+      NGF+C +PE SF++ N  L   E+V+ Y W + + DLDTSTRFL  NVGF C  N++YL + GD++  GG E VV+D   A  DG W+G TS+   AGWHGS  +G   +   +RR  ++    G  L + + PGTQ  C+  +V  V+I   +H TR TL
Sbjct:   25 DICPNQCYKNSRMPIRECRRSNLAHLCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGANVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRRTDNH--EEGNNLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTL 222          
BLAST of Gvermi6243.t1 vs. uniprot
Match: A0A2V3IS72_9FLOR (VWFD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS72_9FLOR)

HSP 1 Score: 139 bits (350), Expect = 3.010e-34
Identity = 74/151 (49.01%), Postives = 99/151 (65.56%), Query Frame = 0
Query:   70 SFIIANIHLPAVELVLEYSWGNSQSDLDTSTRFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGSTSVDALAGWHGSDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCATTEVGTVEISSAQHHTRFTL 220
            S  + N    A +LV++Y+WG+ QSDLDT TRFL+G VGF CSP+ +++ FSGDNTG GG ET+V+ +  A A G W+ ST+V A AGW+    +G  TL+ +LR       V G+ LSS VSPG Q+NCA+T VGTV I    + T  +L
Sbjct: 1061 SVSVPNQQFEAYDLVVKYTWGSDQSDLDTGTRFLDGIVGFRCSPSGQFMTFSGDNTGTGGSETIVVRVNAARAQGLWTSSTNVTANAGWYRRA-QGPATLRVFLRENDTLSEVSGSGLSSVVSPGVQSNCASTLVGTVNIDVGVNDTTVSL 1210          
BLAST of Gvermi6243.t1 vs. uniprot
Match: A0A840V7Z2_9BACT (Uncharacterized protein n=1 Tax=Haloferula luteola TaxID=595692 RepID=A0A840V7Z2_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 4.070e-14
Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 0
Query:   83 LVLEYSWGNSQSDLDTSTRFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGSTSVDALAGWHG-SDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCATTEVGTVEISSAQHHTRFT 219
            L + Y+W +SQ DLDT+T FL  +VG++ + ++EYL ++GD+TG GG+E V   I+ A  D     S  V A AGW+  +   G   L+ YL      G + G     T+ PGTQ+  A+T VG+   +   + TR T
Sbjct:  336 LKILYTWPSSQRDLDTTTTFLGESVGYASASSSEYLIWTGDDTGSGGLEQVTCLISQAAEDAVLPSSFVVSAKAGWYEPAGGSGPAYLEMYLENPQ-TGVLYGPRNQLTIQPGTQSGAASTPVGSASFTWNPNTTRMT 472          
The following BLAST results are available for this feature:
BLAST of Gvermi6243.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IDC2_9FLOR2.860e-8460.09Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J5L0_9FLOR1.020e-8362.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6U1_9FLOR1.380e-6350.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR1.520e-5147.83Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IS11_9FLOR3.350e-4141.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS72_9FLOR3.010e-3449.01VWFD domain-containing protein n=1 Tax=Gracilariop... [more]
A0A840V7Z2_9BACT4.070e-1437.68Uncharacterized protein n=1 Tax=Haloferula luteola... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..222
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3569283..3569951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6243.t1Gvermi6243.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3569283..3569951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6243.t1 ID=Gvermi6243.t1|Name=Gvermi6243.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=223bp
MMFLFISAVLIASVSYSTAQTTVDMCPNRCNPNRATSERECSNSVTNGVC
AVASCTNPQNGFACEVPEDSFIIANIHLPAVELVLEYSWGNSQSDLDTST
RFLNGNVGFSCSPNNEYLEFSGDNTGFGGVETVVIDIAGALADGNWSGST
SVDALAGWHGSDDEGDVTLKAYLRRKSDNGAVPGALLSSTVSPGTQNNCA
TTEVGTVEISSAQHHTRFTLQA*
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