Gvermi6234.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6234.t1
Unique NameGvermi6234.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length206
Homology
BLAST of Gvermi6234.t1 vs. uniprot
Match: A0A2V3IV69_9FLOR (TNase-like domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV69_9FLOR)

HSP 1 Score: 223 bits (568), Expect = 1.070e-69
Identity = 125/242 (51.65%), Postives = 145/242 (59.92%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDYPV---------------EAMRK----------------------ATVAVFTEVRTVRRASDEEANVAANASIGSNDRPVQIFVQNVNSREGEQILELLGTSYMGCEASPRRGYCY 205
            LDTEESFKF SKP TPWG AAK YA  FFK QT  IIE    ESVEE L K  GTFGR LV VHRLDGV  TE+MIR  +SPYY+KYGNAEF+SH + Y LAER A M  RG+WDQ  V  RV R+YP                 A RK                      AT  VFTE+R +R+A  E A V A ASIG+NDRP +I + ++++  G + LEL+   Y+G E SP RGYCY
Sbjct:   49 LDTEESFKFSSKPVTPWGKAAKSYAVSFFKGQTEVIIEFPGIESVEESLEKYRGTFGRLLVWVHRLDGVDLTERMIRLGYSPYYNKYGNAEFDSHRQRYTLAERAAQMENRGVWDQEGVNGRVIRNYPALCTWWNLRAGIIDRYRAARKSGAVVYNTRKDFAKLSKLAETGATATVFTEIRDLRKARGESAGVGAVASIGTNDRPFEIQIPDIDAGNGAKTLELIRARYIGSERSPNRGYCY 290          
BLAST of Gvermi6234.t1 vs. uniprot
Match: R7QIY4_CHOCR (TNase-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIY4_CHOCR)

HSP 1 Score: 176 bits (445), Expect = 2.390e-49
Identity = 85/127 (66.93%), Postives = 98/127 (77.17%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDY 127
            LDTEESFKFGSKP+TPWG AAK YA +FF DQ   IIE   NESVEECL+K  G FGR LV +HRLDGV ++E MIR  +SPYY+KYGNAEFE+H R ++LAERDA M   G+WDQ +V  RV RDY
Sbjct:   48 LDTEESFKFGSKPSTPWGKAAKDYAKQFFSDQDEIIIEFPGNESVEECLVKYRGAFGRLLVWIHRLDGVEYSEHMIRLGYSPYYNKYGNAEFEAHHRRFMLAERDAQMIAIGVWDQQRVNGRVIRDY 174          
BLAST of Gvermi6234.t1 vs. uniprot
Match: A0A166R5I0_9EURY (TNase-like domain-containing protein n=1 Tax=Haladaptatus sp. R4 TaxID=1679489 RepID=A0A166R5I0_9EURY)

HSP 1 Score: 115 bits (287), Expect = 2.230e-27
Identity = 77/226 (34.07%), Postives = 110/226 (48.67%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDYPVEAMRKATVAVFTEVRTVRRASDEEANVA--------------------------------ANASIGSNDRPVQIFVQNVNSREGEQ-ILELLGTSYM 193
            LDTEE+     KP TPWG  AK +A     + +   IE    ES++ECL +  G +GR LV VH +DG  + E MIR  +SPY++KYG A F+ H R Y  AE++A   + G+W+Q KV   V R+Y  E +R         VR  R A+D+E+ +                                 A   IGS ++P Q+F+ N    EG Q ++ L+   Y+
Sbjct:   45 LDTEETHAGVGKPKTPWGEKAKEHAKGLVPEGSSITIEFPGTESIDECLRRYRGNYGRPLVYVH-VDGEDYQEHMIRKGYSPYFTKYGYAVFDDHHRRYRDAEQNAQADDIGVWNQSKVNGSVMREY--EPLRSWWTLRAEIVRRYRSATDDESILDTRQDYHRIENSVGDELTVFTELDGYERAGEKHAIVKIGSKEQPFQLFLPNALETEGGQRLISLMEKRYI 267          
BLAST of Gvermi6234.t1 vs. uniprot
Match: A0A1H9BZZ4_9EURY (Micrococcal nuclease n=1 Tax=Natrinema salaciae TaxID=1186196 RepID=A0A1H9BZZ4_9EURY)

HSP 1 Score: 114 bits (284), Expect = 5.080e-27
Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDYPVEA----MRKATVAVFTEVRTVRRASDEE 153
            LDTEES+  G+KP TPWG AAK  A + F + T + +E    E +EECL +  G +GR L  +H  +G  + E MIR  +SPY++KYG A F++H R Y  AER A     G+W+Q++V     RDY        +R  T+  F   R  RR   EE
Sbjct:   40 LDTEESWAGGNKPVTPWGTAAKEKAEDVFPEGTVATLEFPGTEPLEECLRRYRGNYGRPLAYLHA-NGEDYQETMIREGYSPYFTKYGYAHFDTHDRRYREAERQAQADAIGVWNQLQVNGAEMRDYDSLTAWWELRAETIETF---RRARRDGTEE 192          
BLAST of Gvermi6234.t1 vs. uniprot
Match: A0A372IW95_9ACTN (Nuclease n=1 Tax=Geodermatophilus sp. LHW52908 TaxID=2303986 RepID=A0A372IW95_9ACTN)

HSP 1 Score: 111 bits (278), Expect = 3.110e-26
Identity = 65/151 (43.05%), Postives = 79/151 (52.32%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDYPVEAMRKATVAVFTEVRTVRRASD 151
            LDTEES     KP TPWG  AK  A  FF       +E    E ++ CL +    FGR LV  HR D   F E MIR+ FSPY++KYG+AEF+ H   Y+ AER A  A  G+WDQV V     R+Y +     A  A   +    RRA D
Sbjct:   38 LDTEESNPGSDKPITPWGRRAKEEAERFFPAGEPVTLEFPGTEDLDVCLRRYRDNFGRLLVFAHRGD-TDFQEHMIRTGFSPYFAKYGHAEFDDHRDRYVTAERAAQAAHTGVWDQVTVNGSEMRNYALLGTWWALRAALVDDYRRRRAVD 187          
BLAST of Gvermi6234.t1 vs. uniprot
Match: A0A6L9J9M9_9CHLR (Nuclease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L9J9M9_9CHLR)

HSP 1 Score: 109 bits (273), Expect = 1.740e-25
Identity = 58/127 (45.67%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDY 127
            LDTEES    SKP TPWG  AK  A + F+      +E   +ES E C  +  G +GR LV V+  DG  F E MIR  FSPY+ KYG A+F  +   Y  AER+A +  RG+WDQ+KV     R+Y
Sbjct:   35 LDTEESNAGSSKPVTPWGHEAKKEAQKLFQPGDAVSLEFPGHESAETCWERYRGNYGRPLVFVYLRDGRDFQEHMIREGFSPYFVKYGYAQFPENHYRYTQAEREAQVGFRGVWDQIKVNGSEMRNY 161          
BLAST of Gvermi6234.t1 vs. uniprot
Match: A0A1Z4LN71_9CYAN (Putative staphylococcal nuclease domain n=1 Tax=Calothrix parasitica NIES-267 TaxID=1973488 RepID=A0A1Z4LN71_9CYAN)

HSP 1 Score: 107 bits (266), Expect = 2.240e-24
Identity = 55/127 (43.31%), Postives = 75/127 (59.06%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDY 127
            LDTEES     KP +PWG  AK  A + FK      ++   +ESV+ECL +  G +GR LV V+  DG  F E MI+  FSPY+ KYG A    +   Y+ AE++A +A RGIW+Q++V     R+Y
Sbjct:   45 LDTEESNAGSPKPVSPWGKEAKKEAEKLFKAGDKVKLKFPGDESVKECLQRYRGNYGRLLVFVYLDDGTDFQEHMIKKGFSPYFMKYGYAALPDNHERYMQAEKEAQIANRGIWNQIEVNGSQVRNY 171          
BLAST of Gvermi6234.t1 vs. uniprot
Match: K9RJK0_9CYAN (Micrococcal nuclease-like nuclease n=1 Tax=Rivularia sp. PCC 7116 TaxID=373994 RepID=K9RJK0_9CYAN)

HSP 1 Score: 106 bits (264), Expect = 4.300e-24
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDY 127
            LDTEES     KP +PWG  AK  A + FK      +E   +E VEEC+ K  G +GR LV V+  DG  F E MI+  FSPY+ KYG A    +   Y+ AE++A +A RG+W+Q++V     R+Y
Sbjct:   45 LDTEESNAGSPKPVSPWGKEAKKEAEKLFKAGDKVKLEFPGDEVVEECMQKYRGNYGRLLVFVYLDDGTDFQEYMIQKGFSPYFMKYGYAALLDNHERYMQAEKEAQIANRGVWNQIEVNGSEVRNY 171          
BLAST of Gvermi6234.t1 vs. uniprot
Match: A0A7K3ZWE7_9EURY (Nuclease n=1 Tax=Methanothrix sp. TaxID=90426 RepID=A0A7K3ZWE7_9EURY)

HSP 1 Score: 91.3 bits (225), Expect = 1.550e-18
Identity = 48/129 (37.21%), Postives = 66/129 (51.16%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDYPV 129
            LDTEES   G KP TPWG  AK  A   F       +E    E+ + C  +    +GR +  V+  DG  + + MI   +SPY+ KYG AEF  + + Y  AE  A    +G+WDQ+ V     R+YP+
Sbjct:   35 LDTEESQPGGDKPMTPWGKKAKEEAQRIFVAGKTVTLEFPGKEAADVCWERYRDNYGRAMAYVYAPDGSDYQKHMIGQGYSPYFVKYGYAEFAVNHKAYTDAEVAAQKENKGLWDQISVNGSEMRNYPL 163          
BLAST of Gvermi6234.t1 vs. uniprot
Match: UPI000EA7F1C2 (thermonuclease family protein n=1 Tax=Ruegeria sp. EL01 TaxID=2107578 RepID=UPI000EA7F1C2)

HSP 1 Score: 83.6 bits (205), Expect = 1.250e-15
Identity = 57/149 (38.26%), Postives = 70/149 (46.98%), Query Frame = 0
Query:    1 LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLMKSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYILAERDAHMAERGIWDQVKVTSRVNRDY-PVEAMRKATVAVFTEVRTVRR 148
            LDTEE F  GSKP TP G AA   A +         + L   E  EE L K  G FGR L  +   DG  F + MI+   SPY+ KYG AEF      Y  AER A   + GIWDQ+     V R+Y P+         +    R ++R
Sbjct:   38 LDTEEVFA-GSKPVTPMGQAASDRAKKLITPGDTIKLILPGTEPREEALQKYRGNFGRVLCYLELEDGTDFQQVMIQEGLSPYFQKYGYAEFAHLHDRYRDAERRAQTDKLGIWDQIANNGSVMRNYAPLTTWWDLRARIIEGYRDIKR 185          
The following BLAST results are available for this feature:
BLAST of Gvermi6234.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IV69_9FLOR1.070e-6951.65TNase-like domain-containing protein n=1 Tax=Graci... [more]
R7QIY4_CHOCR2.390e-4966.93TNase-like domain-containing protein n=1 Tax=Chond... [more]
A0A166R5I0_9EURY2.230e-2734.07TNase-like domain-containing protein n=1 Tax=Halad... [more]
A0A1H9BZZ4_9EURY5.080e-2741.40Micrococcal nuclease n=1 Tax=Natrinema salaciae Ta... [more]
A0A372IW95_9ACTN3.110e-2643.05Nuclease n=1 Tax=Geodermatophilus sp. LHW52908 Tax... [more]
A0A6L9J9M9_9CHLR1.740e-2545.67Nuclease n=1 Tax=Chloroflexi bacterium TaxID=20267... [more]
A0A1Z4LN71_9CYAN2.240e-2443.31Putative staphylococcal nuclease domain n=1 Tax=Ca... [more]
K9RJK0_9CYAN4.300e-2443.31Micrococcal nuclease-like nuclease n=1 Tax=Rivular... [more]
A0A7K3ZWE7_9EURY1.550e-1837.21Nuclease n=1 Tax=Methanothrix sp. TaxID=90426 RepI... [more]
UPI000EA7F1C21.250e-1538.26thermonuclease family protein n=1 Tax=Ruegeria sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035437SNase-like, OB-fold superfamilyGENE3D2.40.50.90coord: 1..120
e-value: 1.7E-10
score: 42.9
IPR035437SNase-like, OB-fold superfamilySUPERFAMILY50199Staphylococcal nucleasecoord: 5..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3398023..3398716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6234.t1Gvermi6234.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3398023..3398716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6234.t1 ID=Gvermi6234.t1|Name=Gvermi6234.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=206bp
LDTEESFKFGSKPATPWGAAAKLYASEFFKDQTGSIIELARNESVEECLM
KSGGTFGRWLVCVHRLDGVGFTEQMIRSEFSPYYSKYGNAEFESHPRCYI
LAERDAHMAERGIWDQVKVTSRVNRDYPVEAMRKATVAVFTEVRTVRRAS
DEEANVAANASIGSNDRPVQIFVQNVNSREGEQILELLGTSYMGCEASPR
RGYCY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035437SNase_OB-fold_sf