Gvermi6224.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6224.t1
Unique NameGvermi6224.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length594
Homology
BLAST of Gvermi6224.t1 vs. uniprot
Match: A0A2V3IHE7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHE7_9FLOR)

HSP 1 Score: 571 bits (1472), Expect = 3.580e-196
Identity = 301/583 (51.63%), Postives = 410/583 (70.33%), Query Frame = 0
Query:   15 RLNASEARKRKYAIEHQQEVVKSYVRLALQKAVAR--GKFQAWSKTTTIREDEDIVQKWLKHIYREKRRISSLRREESEEIMIIDALESLETSGSKFCEKTIPLYARRLSKIIPELPELCRMLHRTSKLSIKQVKYGEIQTARALVWYASGPRMPSPEVLSRAHDLVEFESGRRQESRPRRHLKDPRILRKNVRVDSIDQILAISLVELTDRTMYCLTNNSKPCMLYSDKTTAVCSLSEFVAEISRCVIHLNPALLELVNKCMTHLMDRTKLIFRLERNNDLINLLWGEPQRLKEWYETVILFQRQGVTNFLFAMMHSDYGQFEILGLRYTYGRGKFADQHLHAMPRYRIAAMELDREFSKKDDNFKKSVYMRNGVLVKREPRIQVALRAFILIVYAIVMVVLTVVLCVKGVNDQGIVGYLEAISLVILGTIGTLVSIWQCMSSQTRPIRHALQGCRQVHGIEDLLSVSYLRVFANKREREE--ELEIFRKWLAGTGFGENLPGIEVFYSGKDRYPLYDPKGIRVDHLSQVTLCDGYYLVRRRDDKARLLMRHGDNLRVEDICDAHAVMVSVSTHCTMRVGGD 593
            R   +E+  ++  IEHQ++ +  YV LAL+KAV    G  +          DE++ + WL+ IYR +R  S + REESEE  II+AL  L+       + T+   A+ + K++PELP L  ML++ S L ++ VKYG+ +TARAL WYA GP MPSPE+LSRA+DLV ++SG   +S+P +   D RILRK   + S+D ILA+SLVELTDRT++CL N      LYSD+ T +CSL EFVAEI+RC   L P L E V +   + +DR KL+ ++ERN  LI LLWG+ +R+ +WYE  IL  R G+TNFLF MMHSDYGQFEI GLRY +GR K+AD+H  A+P YR  A+++++   KKD  F++SVYM++GVLV+REP +Q A R  ++I+Y ++ + LT+V+ V     +   GY+E +SLV++G IG  V++W+C+SSQ+RPIR+A  G ++ H IEDL+SVSY+     ++ + E  E+E FRKWLAG GFG NLPGI+VF++GKD+YPLYDPKGIRVD LS+VTLCDGYYLVRR D+KAR L+RHGDNL V++  D HA++VS+S  C MRVGGD
Sbjct:   15 RQTIAESVSKQRVIEHQKDGLTRYVLLALEKAVVNETGSRRIEPDDANNETDEEVAKLWLESIYRTERMKSRIGREESEERRIIEALGRLDR------DTTLRKRAKTVIKVVPELPSLYSMLNKASDLFVEHVKYGDYETARALAWYAYGPTMPSPEILSRAYDLVAYDSGLILQSKPMKGCPDLRILRKPTELRSMDDILALSLVELTDRTIHCLKNTQ----LYSDRKTLICSLGEFVAEIARCAFSLVPELRERVIESFVNYLDRDKLLLKMERNETLIKLLWGDEKRMSKWYENHILKTRSGLTNFLFGMMHSDYGQFEINGLRYLFGRWKYADEHEQAIPYYRRNALKIEKWLMKKDPYFRESVYMKDGVLVRREPPLQRACRLLLIILYVMIGIALTLVVTVNS-TLRDAAGYIEVVSLVLVGMIGVGVTLWECLSSQSRPIRYAFHGFKEAHTIEDLMSVSYVDRIRRRKSKFEGPEIERFRKWLAGIGFGNNLPGIDVFFTGKDKYPLYDPKGIRVDDLSEVTLCDGYYLVRRPDEKARELLRHGDNLHVDNFVDGHAIIVSMSNRCEMRVGGD 586          
The following BLAST results are available for this feature:
BLAST of Gvermi6224.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHE7_9FLOR3.580e-19651.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 432..451
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..397
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 421..431
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 398..420
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 452..593
NoneNo IPR availableTMHMMTMhelixcoord: 428..450
NoneNo IPR availableTMHMMTMhelixcoord: 399..421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:3374661..3376442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6224.t1Gvermi6224.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 3374661..3376442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6224.t1 ID=Gvermi6224.t1|Name=Gvermi6224.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=594bp
MSHPDHSRHPRKVSRLNASEARKRKYAIEHQQEVVKSYVRLALQKAVARG
KFQAWSKTTTIREDEDIVQKWLKHIYREKRRISSLRREESEEIMIIDALE
SLETSGSKFCEKTIPLYARRLSKIIPELPELCRMLHRTSKLSIKQVKYGE
IQTARALVWYASGPRMPSPEVLSRAHDLVEFESGRRQESRPRRHLKDPRI
LRKNVRVDSIDQILAISLVELTDRTMYCLTNNSKPCMLYSDKTTAVCSLS
EFVAEISRCVIHLNPALLELVNKCMTHLMDRTKLIFRLERNNDLINLLWG
EPQRLKEWYETVILFQRQGVTNFLFAMMHSDYGQFEILGLRYTYGRGKFA
DQHLHAMPRYRIAAMELDREFSKKDDNFKKSVYMRNGVLVKREPRIQVAL
RAFILIVYAIVMVVLTVVLCVKGVNDQGIVGYLEAISLVILGTIGTLVSI
WQCMSSQTRPIRHALQGCRQVHGIEDLLSVSYLRVFANKREREEELEIFR
KWLAGTGFGENLPGIEVFYSGKDRYPLYDPKGIRVDHLSQVTLCDGYYLV
RRRDDKARLLMRHGDNLRVEDICDAHAVMVSVSTHCTMRVGGD*
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