Gvermi6163.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6163.t1
Unique NameGvermi6163.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length290
Homology
BLAST of Gvermi6163.t1 vs. uniprot
Match: A0A2V3IL17_9FLOR (Ubiquitin and WLM domain-containing metalloprotease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL17_9FLOR)

HSP 1 Score: 279 bits (714), Expect = 1.950e-90
Identity = 140/287 (48.78%), Postives = 186/287 (64.81%), Query Frame = 0
Query:    1 MKVIALHRGKRYALPGLAPTCCLGDVRNAVASALQVDAERVKLLHRGREMRDWQSLVSDLKPPLVFLVVLNDAEHAVKAPSYSLPSVAP-RSSAAAVRSSADVR---IGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQRTADGRSWNVGGRRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGSSRLLREFEEQRR 283
            MKV   HRG+++ + GL P   L  VR   A+ L    E V+LLH+   +RDWQ  +S L+ PL+F+ +++DA  ++KAP+++LPS  P R+  +A  SS+ +    +  ++V + LPN+  A  ML+QLA D GF YC+ QK W V  LKEMLPDGRVGVDPVCVLGYNRG+G EI+LRLRTDDMQGFRDM ++REVFAHELAHCE  EH+  FKE+MRWV+R A+ RSWNVGG R++                                  GSSRLL+E+E+++R
Sbjct:    1 MKVTVSHRGRKHVIDGLQPDTTLQLVREQTATLLDQPPENVRLLHKATHIRDWQHTLSSLQQPLLFMALVSDASKSIKAPAFTLPSAKPSRTIPSASSSSSRIHKQYVSHVQVFEQLPNSKTAYDMLQQLANDSGFAYCVHQKNWHVGTLKEMLPDGRVGVDPVCVLGYNRGKGHEIALRLRTDDMQGFRDMKKIREVFAHELAHCERSEHDEQFKEIMRWVERNANARSWNVGGHRLNASHYPSYEGTSGGNSSSAETAQRLGGH------AGSSRLLQEYEQRKR 281          
BLAST of Gvermi6163.t1 vs. uniprot
Match: R7Q9G2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9G2_CHOCR)

HSP 1 Score: 181 bits (458), Expect = 3.020e-49
Identity = 108/246 (43.90%), Postives = 138/246 (56.10%), Query Frame = 0
Query:    7 HRGKRYALPGLAP-TCCLGDVRNAVASALQVDAER-VKLLHRGREMRDWQSLVSDLKP-PLVFLVVLNDAEHAVKA--------------PSY-SLPSVAPRSSAAAVRSSADVRIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQRTADGRSWNVGGRRV 234
            H+GK    P   P T  L DV  A+ + L +  +  ++LL RGR + D + L S   P  L  L   + A  +V+A              P Y + P   PR+SA+   +SA    G    L G  +   A  +L QLA D GFL  M++KGWRV  LKEM P+G+VGVDPVCVLGYN G+GMEI LRLRTDD  GFR M  +R+V AHELAH    EH++ FKE+MRW++R A    W  GG  V
Sbjct:    8 HQGKPPGAPLRLPATTALADVHTAILAHLSLPPDTSLRLLSRGRLLTDARPLASLPSPCTLYVLSTSSSAISSVRAARPDPLVRPFSRPSPRYVAAPRATPRASASVASASAAFGFGRTEALPGFADHARAAAILEQLATDRGFLDVMKRKGWRVGALKEMPPEGKVGVDPVCVLGYNTGKGMEIHLRLRTDDRMGFRPMRMIRQVLAHELAHNVFSEHDDRFKELMRWIEREAGKMDWRSGGDTV 253          
BLAST of Gvermi6163.t1 vs. uniprot
Match: M1V4J0_CYAM1 (WLM domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V4J0_CYAM1)

HSP 1 Score: 143 bits (360), Expect = 2.510e-37
Identity = 89/228 (39.04%), Postives = 119/228 (52.19%), Query Frame = 0
Query:   19 PTCCLGDVRNAVASALQVDAERVKLLHRGREMRDWQSLVSDLKPPLVFLVVLNDAEHAVKAPSYSLPSVAPRSS-------------------AAAVRSSADVRIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQRTADGRSW 227
            P     ++R  VASA     E VKL+ +GR +R   +L++ ++     L V+  A  A++    + P    R +                    A V S +      +RVL    +A  A  +L QLA D G  Y M++  WRV  L EM PDGRVGVDPVCVLG N+GRG  I LRLRTDD+ GFR    +REV AHELAH EH EH++ F ++MR +    + R W
Sbjct:   49 PEALYEELREQVASAWNFARETVKLIAQGRVLRTGDALLAAVQKQQP-LRVIGTASFALERVQLARPDPLVRPADFDGPGRRPARPFDGELYPRAPVGSCSRWGFSELRVLGNFADAHQAHSLLEQLARDPGVNYVMQKWHWRVGALCEMAPDGRVGVDPVCVLGLNQGRGAAIYLRLRTDDLAGFRRYDAIREVLAHELAHNEHAEHDSRFYKLMREILSEMNRRDW 275          
BLAST of Gvermi6163.t1 vs. uniprot
Match: T0R844_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R844_SAPDV)

HSP 1 Score: 143 bits (361), Expect = 6.110e-36
Identity = 82/234 (35.04%), Postives = 130/234 (55.56%), Query Frame = 0
Query:    1 MKVIALHRGKRY-ALPGLAPTCCLGDVRNAVASALQVDAERVKLLHRGREMRDWQSLVSD-------LKPPLVFLVVLNDAEHAVKA-----PSYSLPSVAPRSSAAAVRSSADV--RIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQ 219
            MKV+ +   +R  +LP  A    + +++  + +      ++ +L+ +G+ + D   +V D       ++P    +  +N+ E A+K       S SL S+  ++   + R+ A +  R   I+ L GLP+   AR +L  LA+D+G L+ M +  W V  L EM PDG+VGVDPVCVLG N  +G  I LRLRTDD+QGFR    +++V  HEL H +  +HNN F ++MR V+
Sbjct:    1 MKVLRVKHAERVLSLPLGADGSSVAELKKQIEALTHAPVDQQRLIVKGKVLADDDVVVDDGRTAVLLVRPSAEAIAAMNEQEAALKKIEETRASRSLVSIQAKNEVLSARAHAALAYRFHEIQTLPGLPDEAKARAILTSLAQDKGILHVMAKHKWTVGALAEMFPDGKVGVDPVCVLGLNENKGQRILLRLRTDDLQGFRKYLTIKKVLYHELTHNDVSDHNNEFYQLMRQVE 234          
BLAST of Gvermi6163.t1 vs. uniprot
Match: A0A7S3XML3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XML3_HETAK)

HSP 1 Score: 131 bits (329), Expect = 1.220e-34
Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:  103 RIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQRTADGRSW 227
            R G I  L GLP  D AR +L QLA D G L  M +  W+V  L E+ P+GRVGV  VCVLG N+ RG +I LRLRTDD++GFR     ++V  HELAH  HD+H++ F ++MR ++R A    W
Sbjct:    5 RFGRIETLPGLPGQDEARSILEQLANDRGILKVMEKHRWQVGALCELYPEGRVGVSEVCVLGLNQNRGQKILLRLRTDDLRGFRKYLGTKKVLYHELAHMVHDDHDDDFYQLMRQIEREAAELDW 129          
BLAST of Gvermi6163.t1 vs. uniprot
Match: A0A1V9YQV1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQV1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.210e-34
Identity = 82/210 (39.05%), Postives = 122/210 (58.10%), Query Frame = 0
Query:   23 LGDVRNAVASALQVDAERVKLLHRGREMRD------WQSLVSDLKPPLVFLVVLNDAEHAVKAPSYS-----LPSVAPRSSAAAVRSSADV--RIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQ 219
            +G V+ A+ + L V A   +L+ +G+ + D       Q+ V  ++P    L  +   E A++    +     + S+  R++A + R+ A +  R  +I  L GLP+   AR +L  LA+D+G L+ M Q  WRV  L EM PDG+VGVDPVCVLG N  +G  I LRLRTDD++GFR    +++V  HELAH E  +HNN F ++MR V+
Sbjct:   22 VGAVKAALEAQLHVPATEQRLIAKGKVLDDAARLAAGQTAVLLVRPSADALAAMAAQETAIQQADTARAARPVISIHERNAALSARAHAALSYRFEAIAPLPGLPDEAKARAILTSLAQDKGILHVMAQHKWRVGSLAEMFPDGKVGVDPVCVLGLNENKGQRILLRLRTDDLRGFRKYLTIKKVLFHELAHNEVSDHNNDFYKLMRQVE 231          
BLAST of Gvermi6163.t1 vs. uniprot
Match: A0A7R9WVU5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVU5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.620e-33
Identity = 62/126 (49.21%), Postives = 83/126 (65.87%), Query Frame = 0
Query:  105 GSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQRTADGRSWNVG 230
            GSI VL  LP+ D AR +L QLA D G L CM Q  W+V  L E+ PDG+VG   VCV+G N+ +G +I LRLRTDD++GFR M  +R+V  HELAH  H EH++ F ++MR +++  +   W  G
Sbjct:  152 GSIDVLPNLPHQDTARGILTQLANDPGVLACMAQHKWKVGSLAELYPDGKVGQSAVCVMGLNKNQGQQILLRLRTDDLKGFRKMLSIRKVLFHELAHNVHSEHDSKFFQLMRQIEKECNEMDWTQG 277          
BLAST of Gvermi6163.t1 vs. uniprot
Match: A0A7J7IR41_9RHOD (WLM domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IR41_9RHOD)

HSP 1 Score: 131 bits (329), Expect = 9.140e-33
Identity = 86/237 (36.29%), Postives = 120/237 (50.63%), Query Frame = 0
Query:    9 GKRYALPGLAPTCCLGDVRNAVASALQVDAERVKLLHRGREMRDWQSLVSDLKP---------PLVFLVVLNDA--EHAVKAPSYSLPSVAP-RSSAAAVR------SSADVRIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQRTADGRSW 227
            G+ + LP       + D+   VA       E VKL+ +GR +R  +SL+   +          P V L  +     +  V+  ++ +P   P R     +R       +A    G +RVL+   +A  AR +L +L  D G  Y MR+  WRV++L EM PDGRV +DPVCV+G N+ RG  I LRLRTDD+ GFR    +REV AHELAH E+ EH+  F   MR V    +   W
Sbjct:   39 GRPFNLPFQDSVNPIDDLIERVALTWNYAPESVKLISQGRLLRTNESLLEAGRSGQRLRATGTPAVALERIRSTKPDPLVRPLAFDVPGTRPARPLDTQLRPRPANWDAARYGFGGVRVLERFDDAAQARALLERLIADPGVDYVMRKWRWRVSLLSEMAPDGRVSIDPVCVMGLNQNRGAVIQLRLRTDDLAGFRRYDSIREVLAHELAHNEYTEHDAIFYRFMRQVLAEMNRHDW 275          
BLAST of Gvermi6163.t1 vs. uniprot
Match: A0A7S1BJE0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJE0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.040e-32
Identity = 64/133 (48.12%), Postives = 79/133 (59.40%), Query Frame = 0
Query:  103 RIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQRTADGRSWNVG-GRRV 234
            R G I  L GLP+   A  +L  LA D G L CM + GW V  L EM PDGRVG DPVCV+G N  +G  I LRLRTDD++GFR +  +R+V  HELAH  H  H   F  +MR V++  +   W    G+RV
Sbjct:   97 RFGRIETLSGLPDERRAHSILESLANDPGILACMTKHGWSVGCLAEMYPDGRVGQDPVCVMGLNENKGQRILLRLRTDDLKGFRKILSIRKVLFHELAHNVHSNHGTKFFVLMRQVEKECNEMDWTQSSGQRV 229          
BLAST of Gvermi6163.t1 vs. uniprot
Match: A0A067C2E0_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C2E0_SAPPC)

HSP 1 Score: 134 bits (336), Expect = 2.110e-32
Identity = 78/234 (33.33%), Postives = 126/234 (53.85%), Query Frame = 0
Query:    1 MKVIALHRGKRY-ALPGLAPTCCLGDVRNAVASALQVDAERVKLLHRGREMRDWQSLVSD-------LKPPLVFLVVLNDAEHAVKA-----PSYSLPSVAPRSSAAAVRSSAD--VRIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEMLPDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELAHCEHDEHNNAFKEVMRWVQ 219
            MKV+ +   +R  +LP  A    + +++  + +      ++ +L+ +G+ + D   +  D       ++P    +  +N+ E A+K       S  + S+  ++   + R+ A    R   I+ L GLP+   A  +L  LA+D+G L+ M +  W V  L EM PDG+VGVDPVCVLG N  +G  I LRLRTDD+QGFR    +++V  HEL H +  +HNN F ++MR V+
Sbjct:    1 MKVLRVKHAERVLSLPLGADGSSVAELKKQLEALTHAPVDQQRLIVKGKVLADDAVVADDGRTAVLLVRPSADAIAAMNEQEAALKKLEETRASRPIVSIQAKNEVLSARAHAARAYRFHEIQTLPGLPDEARATAILTSLAQDKGILHVMAKHKWSVGALAEMYPDGKVGVDPVCVLGLNENKGQRILLRLRTDDLQGFRKYLTIKKVLYHELTHNDVSDHNNEFYQLMRQVE 234          
The following BLAST results are available for this feature:
BLAST of Gvermi6163.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IL17_9FLOR1.950e-9048.78Ubiquitin and WLM domain-containing metalloproteas... [more]
R7Q9G2_CHOCR3.020e-4943.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M1V4J0_CYAM12.510e-3739.04WLM domain-containing protein n=2 Tax=cellular org... [more]
T0R844_SAPDV6.110e-3635.04Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A7S3XML3_HETAK1.220e-3449.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9YQV1_9STRA2.210e-3439.05Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7R9WVU5_9STRA4.620e-3349.21Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7J7IR41_9RHOD9.140e-3336.29WLM domain-containing protein n=1 Tax=Cyanidiococc... [more]
A0A7S1BJE0_9STRA1.040e-3248.12Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A067C2E0_SAPPC2.110e-3233.33Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013536WLM domainPFAMPF08325WLMcoord: 104..234
e-value: 1.9E-27
score: 96.6
IPR013536WLM domainPROSITEPS51397WLMcoord: 95..289
score: 29.590315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..289
NoneNo IPR availablePANTHERPTHR47795UBIQUITIN AND WLM DOMAIN-CONTAINING METALLOPROTEASE SPCC1442.07Ccoord: 95..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2896057..2896926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6163.t1Gvermi6163.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2896057..2896926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6163.t1 ID=Gvermi6163.t1|Name=Gvermi6163.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=290bp
MKVIALHRGKRYALPGLAPTCCLGDVRNAVASALQVDAERVKLLHRGREM
RDWQSLVSDLKPPLVFLVVLNDAEHAVKAPSYSLPSVAPRSSAAAVRSSA
DVRIGSIRVLDGLPNADVARRMLRQLAEDEGFLYCMRQKGWRVNVLKEML
PDGRVGVDPVCVLGYNRGRGMEISLRLRTDDMQGFRDMYRVREVFAHELA
HCEHDEHNNAFKEVMRWVQRTADGRSWNVGGRRVDDGQSGGFGGGGGDAN
RLGGFDGVDGGSGRLGGSGGSSRLLREFEEQRRRRRDGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013536WLM_dom