Gvermi6080.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6080.t1
Unique NameGvermi6080.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length322
Homology
BLAST of Gvermi6080.t1 vs. uniprot
Match: R7QN10_CHOCR (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR)

HSP 1 Score: 365 bits (937), Expect = 4.920e-123
Identity = 182/299 (60.87%), Postives = 220/299 (73.58%), Query Frame = 0
Query:   22 ANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRDRRIIPKSAPAHGLCLERVFYDDWN 320
            A++   N  K+R RARVAYDGT ++GWQYQ    ++QG LE A++RK G  IRVVGASRTD+GVHARGQA+HFD+P   A ++ +  +KF +TLNQMLP DV +  L +AP V    +P  K      +     RPWH IY +KGKLYTYR S +   DP+ RLYRYHEWRA + GFSE +LREAS KFVGSHDFSAFTN+++PP G  PPVL NPIR I SA VI EG  MYR+EF INGAMYRMIRNIMGTIL VSCG +++S ID  F S+DRR++PKSAPA GLCLE+V YD+W 
Sbjct:   44 ASSFPSNPDKQRIRARVAYDGTLYRGWQYQTDQPTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTV----VPC-KVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPPVLSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFASKDRRLVPKSAPAKGLCLEKVIYDEWE 337          
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A2V3J0L1_9FLOR (tRNA pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L1_9FLOR)

HSP 1 Score: 303 bits (775), Expect = 2.700e-100
Identity = 149/214 (69.63%), Postives = 174/214 (81.31%), Query Frame = 0
Query:   18 CSATANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITP 231
            C+    A+S     +RFRARVAYDGT FKGWQ+Q   RSIQGE+EKAI+RK+   +RVVGASRTDSGVHARGQ++HFDVP+Q A++E  ++QKF+FTLNQ+LP+DV LT LELAP V + AIPMFKQASL T Q+ K RPWH I+CS GKLYTYRFSIA   DPM RLYRYHEWRA+R GFSE  LREA+ +F+GSHDFSAFTNAS PP GITP
Sbjct:    2 CAVPNGASSKKHDTKRFRARVAYDGTNFKGWQFQQEERSIQGEIEKAIERKLCTRVRVVGASRTDSGVHARGQSIHFDVPEQKAAREMCNMQKFEFTLNQLLPNDVILTKLELAPHVIHTAIPMFKQASLKTIQEPKLRPWHSIFCSTGKLYTYRFSIATNLDPMDRLYRYHEWRASRFGFSEQRLREATERFLGSHDFSAFTNASHPPPGITP 215          
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A5J4YW71_PORPP (tRNA pseudouridine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW71_PORPP)

HSP 1 Score: 231 bits (589), Expect = 4.540e-70
Identity = 123/295 (41.69%), Postives = 180/295 (61.02%), Query Frame = 0
Query:   33 RFRARVAYDGTRFKGWQYQNGCR-SIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKD-----LQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDD--MYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRDRRIIPKSAPAHGLCLERVFYDDW 319
            R R  VAYDGT F+GWQYQ   R S+Q  LEK   R++    RVVGASRTD+GVHARGQ  HFD+P+++  ++ +      L + +F +N+MLP ++ +  +E+AP  +   +P             + +PWH IYC++ K+Y+Y+   A   DP++RLYR+HE++A      E  L+    +FVG+HDFS+F N  S  E     V+ NP+RT+ S  VI +  D  +  VE  + GA+Y+M+RN++G  L V+   +    ID    +RDRRI PK+APA GLCL+R+FY D+
Sbjct:   97 RCRMTVAYDGTEFRGWQYQINTRNSVQATLEKVFSRRLNGFTRVVGASRTDTGVHARGQVAHFDIPEEIPKEDLQQDDSSGLSRLEFQVNRMLPANLQVLRMEVAPPPSLVKLP----------SGERLKPWHSIYCAQHKIYSYKIMFATCMDPLERLYRHHEYQACDTDLFEAALQ----RFVGTHDFSSFANRLSHGE-----VVRNPVRTVHSVRVIRDERDPRLMTVEVDLQGALYKMVRNMIGAALHVARHDMPPEHIDVLLGARDRRIAPKAAPARGLCLDRIFYADY 372          
BLAST of Gvermi6080.t1 vs. uniprot
Match: M2WXR7_GALSU (tRNA pseudouridine synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXR7_GALSU)

HSP 1 Score: 228 bits (581), Expect = 2.060e-69
Identity = 119/287 (41.46%), Postives = 179/287 (62.37%), Query Frame = 0
Query:   33 RFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRDRRIIPKSAPAHGLCLERVFYDDW 319
            R+R RVAYDGT F GWQ+Q   RS+QG LE+ + +++ + IR++GA RTDSGVHARGQ  HFD      +    D    ++TLN+ML  D+ + +L+              Q   I+S       WH I+ ++ K+Y+YRFSIAK  DP++R +R+H +R  RC      L +A+  F+G+HDF++F + ++  + +      N  RTI+  D+++E  D YR+E+ +NGA+YRMIRNI  ++  V+  +L L  +++   ++DRR  PK+APAHGLCLERV YDD+
Sbjct:   73 RYRLRVAYDGTDFSGWQFQEKRRSVQGVLEQVLSKRLNRSIRIIGAGRTDSGVHARGQVAHFD------TVSFSDCPHLEYTLNRMLSGDIRVYDLQ--------------QKEPISSDPRNN--WHAIFSARKKVYSYRFSIAKELDPLERRFRFHFYR--RCNLER--LYDATKVFLGTHDFTSFCSRNTEMKEMEK----NMCRTIYRIDLVHESGDSYRLEYELNGALYRMIRNITSSLFFVASDELTLDDLNEILHAKDRRRAPKAAPAHGLCLERVIYDDY 329          
BLAST of Gvermi6080.t1 vs. uniprot
Match: D7FS62_ECTSI (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 2.050e-58
Identity = 114/296 (38.51%), Postives = 177/296 (59.80%), Query Frame = 0
Query:   31 KRRFRARVAYDGTRFKGWQYQ-NGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLV---NPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESR--DRRIIPKSAPAHGLCLERVFYDDWN 320
            K RF +RV YDGT +KG+Q Q +G  ++QG LEKA+  +    + VV A RTD+GVH+ GQA+HFD+P        +DL +  +++NQM+P+DV + N+ +AP     + P          Q  K  PW  +  ++GK Y+YR  +     P+ RLYR H  +AA    + ++L +   K VG HDF+ F+N  +    +     +   N +RT++SA++I+EG    R++F ++GA+YRM+RN++G +L V+ G+LE   ID+ F +R  D R+I  +APAHGL L+ V YD + 
Sbjct:  136 KTRFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLP-----NANEDLSQLAYSMNQMMPEDVRVWNMSVAP----PSSPW---------QVEKGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLI-YAAPAHGLTLDTVLYDGYG 412          
BLAST of Gvermi6080.t1 vs. uniprot
Match: M1VG01_CYAM1 (tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG01_CYAM1)

HSP 1 Score: 201 bits (510), Expect = 1.080e-57
Identity = 129/316 (40.82%), Postives = 185/316 (58.54%), Query Frame = 0
Query:   21 TANATSDNSTKR--RFRARVAYDGTRFKGWQYQNGCRS---IQGELEKAIQRKMGKL---IRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPP-EGITPPVLVNPIRTIWSADVINEGDD----MYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFE--SRDRRIIP---KSAPAHGLCLERVFYDD 318
            T NA S  ST+   R+RA VAYDGT F G+Q Q   R+   IQG LE A+Q+++G      +VVGA RTD+GVHARGQ +HFD+P+Q A+  A +  + +  LN++LP  + +  +E++P  A+  +P  +   L+        PWH IY ++GK Y YR S   + DP+   Y Y ++R  +      V ++    FVG+HDF AF  ASSPP +     +  + +RTI    V     D    +++ EF ++GA+YRMIRNIMGT L V+ G+L+ + +    +  SR R +I    K APAHGLCLERV+Y D
Sbjct:   85 TRNAGSAPSTENLVRYRAVVAYDGTDFHGFQRQAKSRATPTIQGRLEAALQQRLGGYPWHCQVVGAGRTDAGVHARGQVIHFDIPEQKAATSAFEPSRLEHALNRLLPRTIQVRAMEVSPPPAWYLVPSTRTYQLL--------PWHAIYRAQGKRYVYRLSAGAWIDPLYHRYAYTDYRQMQ---HWAVAQQMLQTFVGTHDFGAF--ASSPPGKADRHQIQRSTVRTIRRISVEPSPVDSIVPVWKFEFELDGALYRMIRNIMGTFLAVARGELDDALVVDALQQGSRGRALIAPRVKPAPAHGLCLERVYYAD 387          
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A8J2SCD1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.220e-57
Identity = 123/292 (42.12%), Postives = 167/292 (57.19%), Query Frame = 0
Query:   33 RFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKM-GKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKY--PDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRD-RRIIP-KSAPAHGLCLERVFYDDW 319
            R+  RVAYDGT F GWQ+Q   R+++GEL KA   +  G  + ++GASRTDSGVHARGQA H D+P+++A     DL K Q  LN+MLPDDV +  +  AP                       +PWH I CS GK Y+YR + A+Y   DP++RLYR H            +L  A  +  G  DF AF N ++P +    P+ ++ IR I S +  +EG   Y V+  ++GA+YRM+RN++G  +    GKL+L  +D+    R  RR  P KSAPA GLCLE VFYDD+
Sbjct:   17 RYALRVAYDGTHFNGWQHQPNARTVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPEEVADV---DLLKHQ--LNRMLPDDVRINCVREAP-------------------PGGEKPWHAIACSTGKRYSYRMT-ARYGSQDPLERLYRAH---VCYEDLDFALLSNALQRCRGRFDFKAFAN-NAPTQN---PLEMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPTKSAPARGLCLEEVFYDDF 276          
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A7J7INL2_9RHOD (tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INL2_9RHOD)

HSP 1 Score: 192 bits (487), Expect = 1.530e-54
Identity = 128/325 (39.38%), Postives = 186/325 (57.23%), Query Frame = 0
Query:   11 PPCISISCSATANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRS---IQGELEKAIQRKMGKL---IRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITS-QDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAA-RCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVI--NEGD--DMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFES--RDRRIIP---KSAPAHGLCLERVFYDD 318
            P  I   C+      + ++   R+RA VAYDGT F G+Q Q+  R+   IQ +LE  +QR++G      +VVGA RTD+GVHARGQ +HFD+P+ +A   A +  + Q  +NQ+LP  + +  LE+APL          Q  LI   Q+ K  PWH IY ++GKLY YR    ++ DP+ + Y Y E R+  R   +E++L+     FVG+HDF AF + S P +     VL + +RTI    ++  +EG    +++  F ++GA+YRMIRN++G  L V+ G LE   + K  E   R R +I    K APA GLCLE+V+Y D
Sbjct:   52 PVEIDAQCTEPTLTRAQHTELVRYRAVVAYDGTDFHGFQRQSNSRAYPTIQSQLELVLQRRLGCCQWRCQVVGAGRTDAGVHARGQVVHFDIPESMAESVAFEPLQLQHAMNQLLPRTIQIRALEVAPL---------PQLCLIRHIQEYKILPWHAIYHARGKLYVYRMFAGQWRDPLHQRYVYSEHRSLPRWTDAESLLQA----FVGTHDFGAFAH-SPPNKADRQRVLHSTVRTIRRIVLVPRDEGGIVPVWQFHFELDGALYRMIRNLIGAFLAVAKGDLEPELVLKALEQGLRGRALIAARVKPAPAQGLCLEQVYYAD 362          
BLAST of Gvermi6080.t1 vs. uniprot
Match: L1IVY1_GUITC (tRNA pseudouridine synthase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVY1_GUITC)

HSP 1 Score: 187 bits (475), Expect = 2.680e-54
Identity = 109/259 (42.08%), Postives = 151/259 (58.30%), Query Frame = 0
Query:   20 ATANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEV 278
            ATA+  SD     R+R  V YDGT + G+Q Q+   SIQG LE  + RK+ +  RVVGA RTDSGVH+RGQ +HFD     +S+   DLQKFQ  +N MLP DV +  LE   +   D +P   +           R WH IY ++ KLY+YR  I K  DP+ R  R+HE+R        ++LRE +  F G+HDFSAF+N             ++ +RTI+   V+ EG+   R++F ++GA+Y+M+RNI+GTIL V
Sbjct:   20 ATASDDSDLDKTFRYRCNVMYDGTNYNGFQLQHYQPSIQGLLETVLSRKLQRRTRVVGAGRTDSGVHSRGQVVHFD-----SSENITDLQKFQHGMNLMLPLDVKICGLE--HVQDLDFVPHLNET----------RKWHAIYSARKKLYSYRIFIGKVQDPITRHSRHHEYR----NVDLDLLREVAAMFEGTHDFSAFSNTRGDNS------TMDTVRTIYRVGVVFEGEGNVRLDFELDGALYKMVRNIVGTILAV 251          
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A7S4MSL3_9STRA (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 4.950e-53
Identity = 118/298 (39.60%), Postives = 169/298 (56.71%), Query Frame = 0
Query:   33 RFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQ---LASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFF--ESRDRRIIP--------KSAPAHGLCLERVFYD 317
            R+RARVAYDGT F GWQ Q   R+IQG++E  + R+  + +R+VGA RTD+GVHARGQA HFD+      +A  +  DLQ  Q +LN ML  D+ + N   AP  +      +K    I     +   WH IY ++ KLY+YR S A Y DP+ R  R H +          +LR A   F G+HDF AF  A    E  +  VL   IRT+++ +++ EG+  YRV+F + GA+Y+M+RN+MGT L V+ G+LE   + +F   +S + +++         K A   GL LE V++D
Sbjct:   90 RYRARVAYDGTGFNGWQTQAKGRTIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDLRADEIGVADSKCFDLQ-LQRSLNSMLRRDIRVWNTCQAPPPS-----SYKNWEGIE----RNHKWHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVFDPTNI----ELLRTALQHFEGTHDFRAFAGAIDANERKSGKVL-GTIRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKPAAPEGLTLEHVYFD 372          
The following BLAST results are available for this feature:
BLAST of Gvermi6080.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QN10_CHOCR4.920e-12360.87tRNA pseudouridine synthase n=1 Tax=Chondrus crisp... [more]
A0A2V3J0L1_9FLOR2.700e-10069.63tRNA pseudouridine synthase n=1 Tax=Gracilariopsis... [more]
A0A5J4YW71_PORPP4.540e-7041.69tRNA pseudouridine synthase n=1 Tax=Porphyridium p... [more]
M2WXR7_GALSU2.060e-6941.46tRNA pseudouridine synthase n=1 Tax=Galdieria sulp... [more]
D7FS62_ECTSI2.050e-5838.51tRNA pseudouridine synthase n=2 Tax=Ectocarpus Tax... [more]
M1VG01_CYAM11.080e-5740.82tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzo... [more]
A0A8J2SCD1_9STRA1.220e-5742.12Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7J7INL2_9RHOD1.530e-5439.38tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus... [more]
L1IVY1_GUITC2.680e-5442.08tRNA pseudouridine synthase n=1 Tax=Guillardia the... [more]
A0A7S4MSL3_9STRA4.950e-5339.60tRNA pseudouridine synthase n=1 Tax=Odontella auri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 38..137
e-value: 1.7E-5
score: 25.2
coord: 206..317
e-value: 6.1E-19
score: 68.5
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 30..138
e-value: 2.3E-25
score: 90.9
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 166..314
e-value: 1.0E-29
score: 105.1
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 21..317
IPR001406Pseudouridine synthase I, TruAHAMAPMF_00171TruAcoord: 32..316
score: 28.795149
IPR001406Pseudouridine synthase I, TruACDDcd02570PseudoU_synth_EcTruAcoord: 36..316
e-value: 2.52906E-81
score: 244.69
NoneNo IPR availablePANTHERPTHR11142:SF0TRNA PSEUDOURIDINE SYNTHASE-LIKE 1coord: 21..317
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 31..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2123753..2124718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6080.t1Gvermi6080.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2123753..2124718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6080.t1 ID=Gvermi6080.t1|Name=Gvermi6080.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=322bp
MRSQLSFSNWPPCISISCSATANATSDNSTKRRFRARVAYDGTRFKGWQY
QNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQL
ASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITS
QDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSE
NVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEG
DDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRDRRII
PKSAPAHGLCLERVFYDDWNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020094TruA/RsuA/RluB/E/F_N
IPR020095PsdUridine_synth_TruA_C
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf