Gvermi6080.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6080.t1 vs. uniprot
Match: R7QN10_CHOCR (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR) HSP 1 Score: 365 bits (937), Expect = 4.920e-123 Identity = 182/299 (60.87%), Postives = 220/299 (73.58%), Query Frame = 0
Query: 22 ANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRDRRIIPKSAPAHGLCLERVFYDDWN 320
A++ N K+R RARVAYDGT ++GWQYQ ++QG LE A++RK G IRVVGASRTD+GVHARGQA+HFD+P A ++ + +KF +TLNQMLP DV + L +AP V +P K + RPWH IY +KGKLYTYR S + DP+ RLYRYHEWRA + GFSE +LREAS KFVGSHDFSAFTN+++PP G PPVL NPIR I SA VI EG MYR+EF INGAMYRMIRNIMGTIL VSCG +++S ID F S+DRR++PKSAPA GLCLE+V YD+W
Sbjct: 44 ASSFPSNPDKQRIRARVAYDGTLYRGWQYQTDQPTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTV----VPC-KVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPPVLSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFASKDRRLVPKSAPAKGLCLEKVIYDEWE 337
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A2V3J0L1_9FLOR (tRNA pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L1_9FLOR) HSP 1 Score: 303 bits (775), Expect = 2.700e-100 Identity = 149/214 (69.63%), Postives = 174/214 (81.31%), Query Frame = 0
Query: 18 CSATANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITP 231
C+ A+S +RFRARVAYDGT FKGWQ+Q RSIQGE+EKAI+RK+ +RVVGASRTDSGVHARGQ++HFDVP+Q A++E ++QKF+FTLNQ+LP+DV LT LELAP V + AIPMFKQASL T Q+ K RPWH I+CS GKLYTYRFSIA DPM RLYRYHEWRA+R GFSE LREA+ +F+GSHDFSAFTNAS PP GITP
Sbjct: 2 CAVPNGASSKKHDTKRFRARVAYDGTNFKGWQFQQEERSIQGEIEKAIERKLCTRVRVVGASRTDSGVHARGQSIHFDVPEQKAAREMCNMQKFEFTLNQLLPNDVILTKLELAPHVIHTAIPMFKQASLKTIQEPKLRPWHSIFCSTGKLYTYRFSIATNLDPMDRLYRYHEWRASRFGFSEQRLREATERFLGSHDFSAFTNASHPPPGITP 215
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A5J4YW71_PORPP (tRNA pseudouridine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW71_PORPP) HSP 1 Score: 231 bits (589), Expect = 4.540e-70 Identity = 123/295 (41.69%), Postives = 180/295 (61.02%), Query Frame = 0
Query: 33 RFRARVAYDGTRFKGWQYQNGCR-SIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKD-----LQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDD--MYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRDRRIIPKSAPAHGLCLERVFYDDW 319
R R VAYDGT F+GWQYQ R S+Q LEK R++ RVVGASRTD+GVHARGQ HFD+P+++ ++ + L + +F +N+MLP ++ + +E+AP + +P + +PWH IYC++ K+Y+Y+ A DP++RLYR+HE++A E L+ +FVG+HDFS+F N S E V+ NP+RT+ S VI + D + VE + GA+Y+M+RN++G L V+ + ID +RDRRI PK+APA GLCL+R+FY D+
Sbjct: 97 RCRMTVAYDGTEFRGWQYQINTRNSVQATLEKVFSRRLNGFTRVVGASRTDTGVHARGQVAHFDIPEEIPKEDLQQDDSSGLSRLEFQVNRMLPANLQVLRMEVAPPPSLVKLP----------SGERLKPWHSIYCAQHKIYSYKIMFATCMDPLERLYRHHEYQACDTDLFEAALQ----RFVGTHDFSSFANRLSHGE-----VVRNPVRTVHSVRVIRDERDPRLMTVEVDLQGALYKMVRNMIGAALHVARHDMPPEHIDVLLGARDRRIAPKAAPARGLCLDRIFYADY 372
BLAST of Gvermi6080.t1 vs. uniprot
Match: M2WXR7_GALSU (tRNA pseudouridine synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXR7_GALSU) HSP 1 Score: 228 bits (581), Expect = 2.060e-69 Identity = 119/287 (41.46%), Postives = 179/287 (62.37%), Query Frame = 0
Query: 33 RFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRDRRIIPKSAPAHGLCLERVFYDDW 319
R+R RVAYDGT F GWQ+Q RS+QG LE+ + +++ + IR++GA RTDSGVHARGQ HFD + D ++TLN+ML D+ + +L+ Q I+S WH I+ ++ K+Y+YRFSIAK DP++R +R+H +R RC L +A+ F+G+HDF++F + ++ + + N RTI+ D+++E D YR+E+ +NGA+YRMIRNI ++ V+ +L L +++ ++DRR PK+APAHGLCLERV YDD+
Sbjct: 73 RYRLRVAYDGTDFSGWQFQEKRRSVQGVLEQVLSKRLNRSIRIIGAGRTDSGVHARGQVAHFD------TVSFSDCPHLEYTLNRMLSGDIRVYDLQ--------------QKEPISSDPRNN--WHAIFSARKKVYSYRFSIAKELDPLERRFRFHFYR--RCNLER--LYDATKVFLGTHDFTSFCSRNTEMKEMEK----NMCRTIYRIDLVHESGDSYRLEYELNGALYRMIRNITSSLFFVASDELTLDDLNEILHAKDRRRAPKAAPAHGLCLERVIYDDY 329
BLAST of Gvermi6080.t1 vs. uniprot
Match: D7FS62_ECTSI (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI) HSP 1 Score: 202 bits (514), Expect = 2.050e-58 Identity = 114/296 (38.51%), Postives = 177/296 (59.80%), Query Frame = 0
Query: 31 KRRFRARVAYDGTRFKGWQYQ-NGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLV---NPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESR--DRRIIPKSAPAHGLCLERVFYDDWN 320
K RF +RV YDGT +KG+Q Q +G ++QG LEKA+ + + VV A RTD+GVH+ GQA+HFD+P +DL + +++NQM+P+DV + N+ +AP + P Q K PW + ++GK Y+YR + P+ RLYR H +AA + ++L + K VG HDF+ F+N + + + N +RT++SA++I+EG R++F ++GA+YRM+RN++G +L V+ G+LE ID+ F +R D R+I +APAHGL L+ V YD +
Sbjct: 136 KTRFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLP-----NANEDLSQLAYSMNQMMPEDVRVWNMSVAP----PSSPW---------QVEKGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLI-YAAPAHGLTLDTVLYDGYG 412
BLAST of Gvermi6080.t1 vs. uniprot
Match: M1VG01_CYAM1 (tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG01_CYAM1) HSP 1 Score: 201 bits (510), Expect = 1.080e-57 Identity = 129/316 (40.82%), Postives = 185/316 (58.54%), Query Frame = 0
Query: 21 TANATSDNSTKR--RFRARVAYDGTRFKGWQYQNGCRS---IQGELEKAIQRKMGKL---IRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPP-EGITPPVLVNPIRTIWSADVINEGDD----MYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFE--SRDRRIIP---KSAPAHGLCLERVFYDD 318
T NA S ST+ R+RA VAYDGT F G+Q Q R+ IQG LE A+Q+++G +VVGA RTD+GVHARGQ +HFD+P+Q A+ A + + + LN++LP + + +E++P A+ +P + L+ PWH IY ++GK Y YR S + DP+ Y Y ++R + V ++ FVG+HDF AF ASSPP + + + +RTI V D +++ EF ++GA+YRMIRNIMGT L V+ G+L+ + + + SR R +I K APAHGLCLERV+Y D
Sbjct: 85 TRNAGSAPSTENLVRYRAVVAYDGTDFHGFQRQAKSRATPTIQGRLEAALQQRLGGYPWHCQVVGAGRTDAGVHARGQVIHFDIPEQKAATSAFEPSRLEHALNRLLPRTIQVRAMEVSPPPAWYLVPSTRTYQLL--------PWHAIYRAQGKRYVYRLSAGAWIDPLYHRYAYTDYRQMQ---HWAVAQQMLQTFVGTHDFGAF--ASSPPGKADRHQIQRSTVRTIRRISVEPSPVDSIVPVWKFEFELDGALYRMIRNIMGTFLAVARGELDDALVVDALQQGSRGRALIAPRVKPAPAHGLCLERVYYAD 387
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A8J2SCD1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.220e-57 Identity = 123/292 (42.12%), Postives = 167/292 (57.19%), Query Frame = 0
Query: 33 RFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKM-GKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKY--PDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFESRD-RRIIP-KSAPAHGLCLERVFYDDW 319
R+ RVAYDGT F GWQ+Q R+++GEL KA + G + ++GASRTDSGVHARGQA H D+P+++A DL K Q LN+MLPDDV + + AP +PWH I CS GK Y+YR + A+Y DP++RLYR H +L A + G DF AF N ++P + P+ ++ IR I S + +EG Y V+ ++GA+YRM+RN++G + GKL+L +D+ R RR P KSAPA GLCLE VFYDD+
Sbjct: 17 RYALRVAYDGTHFNGWQHQPNARTVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPEEVADV---DLLKHQ--LNRMLPDDVRINCVREAP-------------------PGGEKPWHAIACSTGKRYSYRMT-ARYGSQDPLERLYRAH---VCYEDLDFALLSNALQRCRGRFDFKAFAN-NAPTQN---PLEMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPTKSAPARGLCLEEVFYDDF 276
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A7J7INL2_9RHOD (tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INL2_9RHOD) HSP 1 Score: 192 bits (487), Expect = 1.530e-54 Identity = 128/325 (39.38%), Postives = 186/325 (57.23%), Query Frame = 0
Query: 11 PPCISISCSATANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRS---IQGELEKAIQRKMGKL---IRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITS-QDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAA-RCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVI--NEGD--DMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFFES--RDRRIIP---KSAPAHGLCLERVFYDD 318
P I C+ + ++ R+RA VAYDGT F G+Q Q+ R+ IQ +LE +QR++G +VVGA RTD+GVHARGQ +HFD+P+ +A A + + Q +NQ+LP + + LE+APL Q LI Q+ K PWH IY ++GKLY YR ++ DP+ + Y Y E R+ R +E++L+ FVG+HDF AF + S P + VL + +RTI ++ +EG +++ F ++GA+YRMIRN++G L V+ G LE + K E R R +I K APA GLCLE+V+Y D
Sbjct: 52 PVEIDAQCTEPTLTRAQHTELVRYRAVVAYDGTDFHGFQRQSNSRAYPTIQSQLELVLQRRLGCCQWRCQVVGAGRTDAGVHARGQVVHFDIPESMAESVAFEPLQLQHAMNQLLPRTIQIRALEVAPL---------PQLCLIRHIQEYKILPWHAIYHARGKLYVYRMFAGQWRDPLHQRYVYSEHRSLPRWTDAESLLQA----FVGTHDFGAFAH-SPPNKADRQRVLHSTVRTIRRIVLVPRDEGGIVPVWQFHFELDGALYRMIRNLIGAFLAVAKGDLEPELVLKALEQGLRGRALIAARVKPAPAQGLCLEQVYYAD 362
BLAST of Gvermi6080.t1 vs. uniprot
Match: L1IVY1_GUITC (tRNA pseudouridine synthase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVY1_GUITC) HSP 1 Score: 187 bits (475), Expect = 2.680e-54 Identity = 109/259 (42.08%), Postives = 151/259 (58.30%), Query Frame = 0
Query: 20 ATANATSDNSTKRRFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQLASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEV 278
ATA+ SD R+R V YDGT + G+Q Q+ SIQG LE + RK+ + RVVGA RTDSGVH+RGQ +HFD +S+ DLQKFQ +N MLP DV + LE + D +P + R WH IY ++ KLY+YR I K DP+ R R+HE+R ++LRE + F G+HDFSAF+N ++ +RTI+ V+ EG+ R++F ++GA+Y+M+RNI+GTIL V
Sbjct: 20 ATASDDSDLDKTFRYRCNVMYDGTNYNGFQLQHYQPSIQGLLETVLSRKLQRRTRVVGAGRTDSGVHSRGQVVHFD-----SSENITDLQKFQHGMNLMLPLDVKICGLE--HVQDLDFVPHLNET----------RKWHAIYSARKKLYSYRIFIGKVQDPITRHSRHHEYR----NVDLDLLREVAAMFEGTHDFSAFSNTRGDNS------TMDTVRTIYRVGVVFEGEGNVRLDFELDGALYKMVRNIVGTILAV 251
BLAST of Gvermi6080.t1 vs. uniprot
Match: A0A7S4MSL3_9STRA (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA) HSP 1 Score: 187 bits (475), Expect = 4.950e-53 Identity = 118/298 (39.60%), Postives = 169/298 (56.71%), Query Frame = 0
Query: 33 RFRARVAYDGTRFKGWQYQNGCRSIQGELEKAIQRKMGKLIRVVGASRTDSGVHARGQALHFDVPQQ---LASKEAKDLQKFQFTLNQMLPDDVSLTNLELAPLVAYDAIPMFKQASLITSQDAKPRPWHCIYCSKGKLYTYRFSIAKYPDPMQRLYRYHEWRAARCGFSENVLREASMKFVGSHDFSAFTNASSPPEGITPPVLVNPIRTIWSADVINEGDDMYRVEFRINGAMYRMIRNIMGTILEVSCGKLELSAIDKFF--ESRDRRIIP--------KSAPAHGLCLERVFYD 317
R+RARVAYDGT F GWQ Q R+IQG++E + R+ + +R+VGA RTD+GVHARGQA HFD+ +A + DLQ Q +LN ML D+ + N AP + +K I + WH IY ++ KLY+YR S A Y DP+ R R H + +LR A F G+HDF AF A E + VL IRT+++ +++ EG+ YRV+F + GA+Y+M+RN+MGT L V+ G+LE + +F +S + +++ K A GL LE V++D
Sbjct: 90 RYRARVAYDGTGFNGWQTQAKGRTIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDLRADEIGVADSKCFDLQ-LQRSLNSMLRRDIRVWNTCQAPPPS-----SYKNWEGIE----RNHKWHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVFDPTNI----ELLRTALQHFEGTHDFRAFAGAIDANERKSGKVL-GTIRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKPAAPEGLTLEHVYFD 372 The following BLAST results are available for this feature:
BLAST of Gvermi6080.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6080.t1 ID=Gvermi6080.t1|Name=Gvermi6080.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=322bpback to top |