Gvermi6029.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6029.t1
Unique NameGvermi6029.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length501
Homology
BLAST of Gvermi6029.t1 vs. uniprot
Match: A0A2V3IEL4_9FLOR (SWI/SNF complex component SNF12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEL4_9FLOR)

HSP 1 Score: 803 bits (2075), Expect = 1.400e-290
Identity = 401/502 (79.88%), Postives = 451/502 (89.84%), Query Frame = 0
Query:    1 MEISGEKESALNSETDVGRAAADFLASASERRKRARASLGPMGEQARKRHISSHPSKINVEAARRSAVTLSGESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPETPGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSES--GGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIADTAEETVESVLKS 500
            ME S    +ALN+E DVG+AAADFLASASERRKRARAS+GPMGE ARKRH+SSHP+K+NVEAAR+SA+ L+ ES +YKKL+EMEERLDLA+MRKQQDIKE LKSQFFSEKR+FRLY+FNTYRSQP+TPGVT EDVASWSLRIQG LL + + +N ++ GN  +S+    GVPGL+   G   A+S      + G+ Q +E ASVL+GPPPKCSD+FS+VIVELDK LYPENNMIEWKRK+GEPSSNGFEISRAGSKEFTAKIYL+VDH+P+QFR+SWPLSRLIG+ +ETKKNI+  VWQYVKKNRLQCVDDRT VRL+ GLKTLLGP+NQ+V+ LKLQQLFAIIKSH+GP EP+QI+Y VKL+GDVVD+QDCYDIEVNVQDTSLIESARKAG FGLGLPQSTEYEALSEKHMVALQKIA+HKKRRDFF GFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIADTAEETVES+LKS
Sbjct:    1 MESSPSNSAALNAEIDVGKAAADFLASASERRKRARASMGPMGEHARKRHVSSHPAKVNVEAARKSALALARESSSYKKLMEMEERLDLAIMRKQQDIKETLKSQFFSEKRIFRLYIFNTYRSQPDTPGVTSEDVASWSLRIQGHLLQRSEQSNPVQNGNASESDIRVAGVPGLSTISGATRAASSTQIPGVSGSHQAAESASVLVGPPPKCSDVFSRVIVELDKQLYPENNMIEWKRKDGEPSSNGFEISRAGSKEFTAKIYLYVDHRPEQFRVSWPLSRLIGVKRETKKNIFVGVWQYVKKNRLQCVDDRTTVRLNPGLKTLLGPVNQNVQTLKLQQLFAIIKSHLGPTEPIQIDYDVKLNGDVVDNQDCYDIEVNVQDTSLIESARKAGVFGLGLPQSTEYEALSEKHMVALQKIAEHKKRRDFFEGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIADTAEETVESMLKS 502          
BLAST of Gvermi6029.t1 vs. uniprot
Match: R7QKX3_CHOCR (SWIB domain-containing proteincomplex n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKX3_CHOCR)

HSP 1 Score: 639 bits (1648), Expect = 3.400e-225
Identity = 335/516 (64.92%), Postives = 396/516 (76.74%), Query Frame = 0
Query:   14 ETDVGRAAADFLASASERRKRARASLGPMGEQARKRHISSHPSKINVEAARRSAVTLSGESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPETPGVTPEDVASWSLRIQGQLLPKKDS----------------ANEMEQG---NIGDSESGGVPGLTITPGMQAASSGVTPSA-----------IPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIADTAEETVESVLK 499
            E D+ +AAADFLAS+SERRKRAR S     E  RK+  +S P  IN++ A ++A  L  ESP+Y+ LV MEE+LDLA+MRKQQDIKE LKSQ F E RVFRLY+FNTYRSQP  PG T +DVASWSLRIQG+LL K +                 AN+  +G    + D    GVP L   P +    SGV  SA           I G        SV+ G PPKCSDIF ++++ELDK+ YPENN+IEWKR + EPSS+GFEISR+G KEFTAKI+L++DHKP+QFR+S  LSRLIG+  +TKK I+  VWQY+KKNRLQCVDDR+AVRLD GLK LLGP N +VEVLKLQQLF ++KSHMGP EP+ IEY+VKL+GDVVD+QDCYDI+V+VQDTSLIE+AR+AG FGL LPQSTE+EAL EKH++AL KIA+HKKRRDFF GFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEER+A+FYQQQWV+EAVPRYLLRKAIADTA++T ES LK
Sbjct:   17 EGDIAKAAADFLASSSERRKRARVSAASNAELPRKKLDTSKPPSINIDVANKAAADLIRESPSYRNLVRMEEKLDLAIMRKQQDIKESLKSQSFFESRVFRLYLFNTYRSQPGAPGTTEDDVASWSLRIQGRLLKKSEERPRKSXXXXXXXSGGGANKATRGVSSAVTDPVGPGVPILQNAPAVTP--SGVNQSAHLANPNTPLMPIQGPVLGESNQSVITGQPPKCSDIFKRIVIELDKEFYPENNLIEWKRNDKEPSSDGFEISRSGDKEFTAKIFLYIDHKPEQFRLSHALSRLIGVKTDTKKGIFAGVWQYIKKNRLQCVDDRSAVRLDQGLKGLLGPANANVEVLKLQQLFTVVKSHMGPPEPLMIEYEVKLNGDVVDNQDCYDIQVSVQDTSLIETARRAGVFGLQLPQSTEFEALREKHLLALVKIAEHKKRRDFFKGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERKAAFYQQQWVHEAVPRYLLRKAIADTADDTGESALK 530          
BLAST of Gvermi6029.t1 vs. uniprot
Match: A0A6T6CNK8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CNK8_9RHOD)

HSP 1 Score: 334 bits (857), Expect = 9.270e-107
Identity = 167/464 (35.99%), Postives = 277/464 (59.70%), Query Frame = 0
Query:   33 KRARASLGPMGEQARKRHISSHPSKINVEAARRSAVTLSGESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPETP-GVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLG---LPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIADTAEE 492
            +RA  + G +G       +S  P+ +N   A++ A +L  ES  Y+KLV++E  +D+A+MRKQ  +K ++     +++R FRLY+FNT++ +     G   + VA W++RIQG ++P+ D   +  +G +  +                                            +C+D+F++V++ELD D+YP++ +IEW R E EP ++GFE+SR    EF AKI +FV ++P+ FR+S PL  L+G+  E+  +++ S+W+Y+K NRL   DD+T +RLD GL++LL     +V+ LK+  +F ++KSH+ P+EP++++Y+++LSGD    Q C+D+ +  +D  +   A    +  L    LP +       EKH+ AL+++  H++R++FF  F ++P +FIN +ILSQTRDL+ + G++ R  +EER++SFYQQQWV EAVPRYLL+K I    E+
Sbjct:   27 ERATWTPGRVGRPPNAEKLSPSPATVNASQAKKIADSLLRESETYRKLVKLEREIDVAIMRKQLALKSVVGPPVINKRRTFRLYIFNTFKDRERKELGARADGVAMWTMRIQGWMMPETDEEEDWTEGRVSCTA-------------------------------------------RCTDVFNRVVIELDPDMYPDDYLIEWNRAEDEPIADGFEVSRPSKGEFIAKIIIFVHYRPEHFRLSEPLKALLGVEAESSNSVFASMWKYIKNNRLYGSDDKTMIRLDAGLRSLLPSSAMTVDKLKMSSMFEVVKSHLLPMEPIELKYRIQLSGDPGGQQSCFDLYIPWEDGFVRSGAWTEVSTILSSSKLPDNPALNGFLEKHLEALEQLGVHRRRKEFFERFAADPARFINQMILSQTRDLRAMAGNSSRPHDEERKSSFYQQQWVNEAVPRYLLKKVIGKAPEK 447          
BLAST of Gvermi6029.t1 vs. uniprot
Match: M2XC61_GALSU (SWI/SNF-related matrix-associated actin-dependent regulator ofchromatin subfamily D n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XC61_GALSU)

HSP 1 Score: 272 bits (695), Expect = 2.380e-81
Identity = 167/446 (37.44%), Postives = 252/446 (56.50%), Query Frame = 0
Query:   58 INVEAARRSAVTLSGESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEK---RVFRLYVFNTYRSQPETPGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEV-------LKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSL---IESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIADTA 490
            IN+  A++   TL  ES  +++L+E E+RL+L+  R+Q  I+E +           R FR++VFN    Q +T  VT   V  WSLRIQG + P+ +S  E      GD +        IT   Q       P     A   SE          + + +F K+ VELDK +YPEN + EW  +E +P ++G EI+  G+KE  AKI+L+  +    +++S  L+ L+G T  +  N    VW Y+K ++LQ  +D++ ++LD  L  L   +    +V       +KL QL A+++ H  P EP+ +EY VKL+G+ +D+Q C+D+  +  D  L   +    +         ++  ++A  E++  AL+++  HK+RRDFF GF +NPVQF+NHLI+SQ+RDLK++ G TGRNP+EE+ +SFYQQQWV EAVPRYL RK I D A
Sbjct:   50 INLTQAKKVERTLGNESLLFRQLLEFEKRLNLSFKRRQASIQETMTKMEEPNSLVSRYFRVHVFNLSFEQ-QTKEVTA--VPCWSLRIQGFMTPRNESGEEK-----GDKQ--------ITAEAQK------PEQQQQAQTQSEEKW-------RFTQVFEKIAVELDKVVYPENYLFEWSPEE-DPIADGIEITVPGNKECLAKIWLYPKNHGDVYKLSPYLASLLGTTHASFSNAAYGVWNYIKVHKLQSAEDKSCIQLDDVLSNLFNQVRDIAQVAVNPGEQIKLSQLIAVVRRHFQPNEPILVEYPVKLNGNWLDNQVCFDMRCDFNDAKLNDWVSDDLRNVLKWKPWEENKLFKAYEERYYDALERMLHHKRRRDFFQGFANNPVQFVNHLIISQSRDLKIISGMTGRNPDEEKLSSFYQQQWVREAVPRYLFRKVIQDAA 465          
BLAST of Gvermi6029.t1 vs. uniprot
Match: A0A0K9RT03_SPIOL (SWIB/MDM2 domain-containing protein n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RT03_SPIOL)

HSP 1 Score: 242 bits (617), Expect = 8.570e-70
Identity = 143/412 (34.71%), Postives = 220/412 (53.40%), Query Frame = 0
Query:   73 ESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPETPGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRK 484
            ES  Y +L+E E R+D ALMRK+ DI+E LK+   S ++  R+YVFNT+ +Q ++  +  +D  +W+L++ G++L                                    G+ P  +     T +P  +     PK S+ F +V + LD+ LYPEN++I W+       + GFE+ R G KEFT  I   +++ P++F++S PL+ L+GI  ET+  I  ++W YVK  +LQ  +D +    D  L+ + G      E +K   +   I  H+ P  P+Q+E+ +KLSG       CYD+ V++         R+         ++ E EA  E    A++KI +H++RR FF+GF  +PV+FIN LI SQ+RDLKV+ G   RN E ERR+ F+ Q WV +AV RYL RK
Sbjct:  190 ESALYTQLLEFESRVDAALMRKKVDIQEALKNPP-SVQKTLRIYVFNTFANQNQSQSMPKKDPPTWTLKVIGRILED----------------------------------GIDPEQL----ATMKPNPMY----PKFSNFFKRVTIALDQRLYPENHLIVWENSRSSAPTEGFEVKRKGDKEFTVNIRFDMNYLPEKFKLSPPLTELLGIEAETRPRIIAAIWHYVKARKLQNPNDPSLFNCDPQLQKVFGE-----EKMKFTMVSQKISQHLTPPPPIQVEHPIKLSGISPSGNACYDVLVDIP----FPIQRELSMLLANTEKTKEIEACDEGICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKVVSGEASRNAERERRSDFFNQPWVEDAVIRYLTRK 549          
BLAST of Gvermi6029.t1 vs. uniprot
Match: A0A0D3EFL1_BRAOL (SWIB/MDM2 domain-containing protein n=10 Tax=Brassiceae TaxID=981071 RepID=A0A0D3EFL1_BRAOL)

HSP 1 Score: 239 bits (611), Expect = 3.890e-69
Identity = 152/432 (35.19%), Postives = 226/432 (52.31%), Query Frame = 0
Query:   57 KINVEAARRSAVTLSGESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPET-PGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIA 487
            K+  ++ +     +  ES  Y +L+E E R+D AL RK+ DI+E LK+   ++K + R+YVFN++ +Q  T PG    D  +W+L+I G++L                                    GV P   PG  Q + P+       PK S  F KVIV LD+ LYPEN+ I W+         GFEI R G++EF A I L +++ P++F++S  L  ++GI  ET+  I +++W YVK  +LQ  +D +    D  L  + G      E +K   +   I  H+ P  P+ +E+++KLSG+      CYD+ V+V         R          ++ E EA  E    A++KI +H++RR FF+GF  +PV+FIN LI SQ++DLKV+ G   RN E+ERRA F+ Q WV +AV RYL RK  A
Sbjct:  150 KLPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKVDIQEALKNPPCTQKTL-RIYVFNSFANQNNTIPGNPNADPPTWTLKIVGRILED----------------------------------GVDPDQ-PGFVQQANPSH------PKFSSFFKKVIVNLDQRLYPENSAITWESARSPAPQEGFEIKRKGNQEFAATIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIISAIWHYVKARKLQNPNDPSFFNCDAALHKVFGE-----EKVKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAISACYDVLVDVP----FPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSKDLKVVAGEASRNAEKERRADFFNQPWVEDAVIRYLNRKPAA 530          
BLAST of Gvermi6029.t1 vs. uniprot
Match: UPI0018ADC278 (SWI/SNF complex component SNF12 homolog n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018ADC278)

HSP 1 Score: 237 bits (604), Expect = 1.830e-68
Identity = 148/413 (35.84%), Postives = 217/413 (52.54%), Query Frame = 0
Query:   73 ESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQ-PETPGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRK 484
            ES  Y +L+E E R+D AL RK+ DI+E LKS   + +R  R+YVFNT+ +Q P TP     +  +WSL+I G++L                                    GV P  + G     +P  +     PK S  F ++ + LD  LYP+N  I W+      S  GFE+ R G KEFT  I L +++ P++FR+S PL  ++GI  +T+  I   +WQYVK  +LQ   D +    D  LK + G      + LK   +   I  H+ P +P+Q +++++LSG+      CYD+ V+V         ++   F     +  E EA  E    +++KI +H++RR FF+GF  +PV+FIN LI SQ+RDLK++ G  GRN E+ERR+ FY Q WV +AV RYL RK
Sbjct:  132 ESALYTQLLEFEARVDAALTRKKVDIQESLKSPP-TLQRTLRIYVFNTFANQTPRTPENKNTEPPTWSLKIVGRILED----------------------------------GVDPDPVSGL---PKPNPMY----PKFSSFFKRITIALDPTLYPDNPTIIWEHARSPASHEGFEVKRKGDKEFTVSIRLDMNYNPEKFRLSPPLMEVLGIEVDTRARIIAGIWQYVKARKLQNPSDPSFFICDPPLKKVFGE-----DKLKFSLVSQKISQHLFPPQPIQFDHKIRLSGNGPVGNACYDVLVDVP----FPLQKEMSAFLTNSEKHKEIEACDEVICASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSRDLKLVAGDAGRNAEKERRSDFYNQPWVEDAVIRYLNRK 493          
BLAST of Gvermi6029.t1 vs. uniprot
Match: A0A1D1Y2S5_9ARAE (SWI/SNF complex component SNF12 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y2S5_9ARAE)

HSP 1 Score: 238 bits (606), Expect = 2.350e-68
Identity = 145/413 (35.11%), Postives = 214/413 (51.82%), Query Frame = 0
Query:   73 ESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPET-PGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRK 484
            ES  Y  L+E E R+D AL RK+ DI+E LK+    +K + R+YVFNT+ +Q  T P     +  SWSL+I G++L          +  +    SGG+P L                                   PK S  F +V + LD +LYPEN  I W+         GFEI R G KEFTA I L ++H P++F++S  L  ++GI  +T+  + + +W YVK  +LQ   D +    D  LK + G      + +K   +   I  H+ P +P+ +E++++LSG+      CYD+ V+V         ++   F     +  E EA  E    +++KI +H++RR FF+GF  +PV+FIN LI SQ+RDLK++ G   RN E+ERR+ FY Q WV +AV RYL RK
Sbjct:  171 ESALYTHLLEFEARVDAALARKKVDIQEALKNPSCIQKTL-RIYVFNTFANQTRTIPEPKNAEPPSWSLKIIGRIL----------EDGVDPDPSGGLPKLNPIY-------------------------------PKFSSFFKRVTITLDPNLYPENPTIVWENSRSSAPQEGFEIKRKGDKEFTASIRLEINHTPEKFKLSPALMEVLGIEVDTRARVVSGIWHYVKARKLQNPSDPSFFACDPPLKKVFGE-----DKIKFALVSQKISQHLSPPQPIHLEHKIRLSGNGAIGNACYDVLVDVP----FPLQKEMSAFLANTEKHKEIEACDEVICASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRK 532          
BLAST of Gvermi6029.t1 vs. uniprot
Match: A0A833QK96_9POAL (SWI/SNF complex component SNF12 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QK96_9POAL)

HSP 1 Score: 235 bits (600), Expect = 9.420e-68
Identity = 148/413 (35.84%), Postives = 217/413 (52.54%), Query Frame = 0
Query:   73 ESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPET-PGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRK 484
            ES  Y +L+E E R+D AL RK+ DI+E LKS   S ++  R+YVFNT+ +Q  T P     +  SWSL+I G++L   D  NE +        +GG+P                            P        PK S  F +V + LD++LYP+N MI W+         GFE+ R G KEFTA I   +++ P++F++S PL  ++GI  +T+  +   +WQYVK  +LQ   D      D  L+ + G      E +K   +   I  H+    P+ IE++V+L+G  +    CYDI V+V         ++   F   + +  + EA  E    +++KI +H+KRR FF+GF  +PV+F+N LI SQ+RDLK++ G   RN E+ERRA FY Q WV +AV RYL RK
Sbjct:  143 ESALYTQLLEFEARVDSALARKKIDIQEALKSPP-SMQKTLRIYVFNTFANQTRTAPTSKNAEPPSWSLKIIGRIL---DDPNEADP-------AGGIP-------------------------KQNPIY------PKFSTFFKRVSIALDQNLYPDNPMIIWENARSAAPHEGFEVKRKGDKEFTANIRFDMNYMPERFKLSPPLMEVLGIEVDTRARVIAGLWQYVKAKKLQNPSDPAFFICDPPLRRIFGE-----EKMKFAMVSQKISQHLSQPLPITIEHRVRLNGSGLVGNTCYDITVDVS----FPLQKEMAAFLANIEKHKDIEACDEVICASIKKIHEHRKRRAFFLGFSQSPVEFVNTLIASQSRDLKIVAGDASRNAEKERRADFYNQPWVEDAVIRYLNRK 504          
BLAST of Gvermi6029.t1 vs. uniprot
Match: A0A834G9R7_RHOSS (SWIB/MDM2 domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834G9R7_RHOSS)

HSP 1 Score: 233 bits (593), Expect = 1.310e-67
Identity = 144/413 (34.87%), Postives = 220/413 (53.27%), Query Frame = 0
Query:   73 ESPAYKKLVEMEERLDLALMRKQQDIKEMLKSQFFSEKRVFRLYVFNTYRSQPETPGVTPEDVASWSLRIQGQLLPKKDSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPASVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISRAGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVKKNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLEPVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQSTEYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKVLGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKA 485
            ES  Y +L+E E R+D AL RK+ DI+E LK+    +K + RLYVFNTY +Q +T      +  SWSL+I G++L                             GM  ++SG+            +  + L    PK S  F K+ + LD+ LYPEN++I W+         GFE+ R G KEF A I L +++ P++F++S  L+ ++GI  ET+  +  ++W YVK  +LQ   D +    D  L+ + G      + +K   +   I  H+ P +P+ +E+++KLSG+      CYD+ V+V     +   R+   F   L +  E +A  E    A++KI +H++RR FF+GF  +P  FIN LI SQ+RDLK++ G   +N E+ERR+ FY Q WV +AV RYL RK+
Sbjct:   64 ESALYTQLLEFETRVDAALARKKIDIQESLKNPPRVQKTL-RLYVFNTYANQMQTIPEKNSEPPSWSLKIIGRILED---------------------------GMDTSASGMV-----------QKQNALY---PKFSSFFKKITIYLDQSLYPENHVILWESTRSPSLHEGFEVRRKGDKEFNAIIRLEMNYTPEKFKLSPALTEVLGIEVETRPRVIAALWHYVKIRKLQIPSDPSFFMCDPPLRKVFGE-----DKMKFSTVSQKISQHLTPPQPIHLEHRIKLSGNSPTGNTCYDVLVDVP----VSLEREMSAFLANLEKHKEIDACDEAISGAIKKIHEHRRRRAFFLGFSQSPADFINALITSQSRDLKLVAGDASQNAEKERRSDFYNQPWVEDAVIRYLNRKS 425          
The following BLAST results are available for this feature:
BLAST of Gvermi6029.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEL4_9FLOR1.400e-29079.88SWI/SNF complex component SNF12-like n=1 Tax=Graci... [more]
R7QKX3_CHOCR3.400e-22564.92SWIB domain-containing proteincomplex n=1 Tax=Chon... [more]
A0A6T6CNK8_9RHOD9.270e-10735.99Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XC61_GALSU2.380e-8137.44SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A0K9RT03_SPIOL8.570e-7034.71SWIB/MDM2 domain-containing protein n=3 Tax=Chenop... [more]
A0A0D3EFL1_BRAOL3.890e-6935.19SWIB/MDM2 domain-containing protein n=10 Tax=Brass... [more]
UPI0018ADC2781.830e-6835.84SWI/SNF complex component SNF12 homolog n=1 Tax=Di... [more]
A0A1D1Y2S5_9ARAE2.350e-6835.11SWI/SNF complex component SNF12 n=1 Tax=Anthurium ... [more]
A0A833QK96_9POAL9.420e-6835.84SWI/SNF complex component SNF12 n=1 Tax=Carex litt... [more]
A0A834G9R7_RHOSS1.310e-6734.87SWIB/MDM2 domain-containing protein n=1 Tax=Rhodod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10SWIB/MDM2 domaincoord: 265..354
e-value: 2.4E-14
score: 55.1
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 260..356
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 270..338
e-value: 2.6E-11
score: 43.2
IPR003121SWIB/MDM2 domainPROSITEPS51925SWIB_MDM2coord: 266..348
score: 16.211416
NoneNo IPR availablePANTHERPTHR13844SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY Dcoord: 31..484
NoneNo IPR availablePANTHERPTHR13844:SF7BRAHMA-ASSOCIATED PROTEIN OF 60 KDAcoord: 31..484
NoneNo IPR availableCDDcd10568SWIB_likecoord: 276..346
e-value: 1.01558E-19
score: 81.04

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1822101..1823603 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6029.t1Gvermi6029.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1822101..1823603 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6029.t1 ID=Gvermi6029.t1|Name=Gvermi6029.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=501bp
MEISGEKESALNSETDVGRAAADFLASASERRKRARASLGPMGEQARKRH
ISSHPSKINVEAARRSAVTLSGESPAYKKLVEMEERLDLALMRKQQDIKE
MLKSQFFSEKRVFRLYVFNTYRSQPETPGVTPEDVASWSLRIQGQLLPKK
DSANEMEQGNIGDSESGGVPGLTITPGMQAASSGVTPSAIPGAFQTSEPA
SVLIGPPPKCSDIFSKVIVELDKDLYPENNMIEWKRKEGEPSSNGFEISR
AGSKEFTAKIYLFVDHKPQQFRISWPLSRLIGITKETKKNIYNSVWQYVK
KNRLQCVDDRTAVRLDTGLKTLLGPMNQSVEVLKLQQLFAIIKSHMGPLE
PVQIEYQVKLSGDVVDHQDCYDIEVNVQDTSLIESARKAGTFGLGLPQST
EYEALSEKHMVALQKIADHKKRRDFFVGFCSNPVQFINHLILSQTRDLKV
LGGSTGRNPEEERRASFYQQQWVYEAVPRYLLRKAIADTAEETVESVLKS
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036885SWIB_MDM2_dom_sf
IPR003121SWIB_MDM2_domain