Gvermi6025.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6025.t1
Unique NameGvermi6025.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length192
Homology
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BLAST of Gvermi6025.t1 vs. uniprot
Match: A0A2V3IEP5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEP5_9FLOR)

HSP 1 Score: 314 bits (804), Expect = 2.950e-107
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0 
Query:    1 MFRSSGVIRRACARQARLLHEDSSRGDFLGFSISRAPASDARYGMDMTRAPGYEVAADEEPPRSGNQKLADFASRHGRLSASQVQKAKGYLWVGTVLYPAEQSSDVDVTFTWEIVQEADDFEHSDQVNSVIEVIDNTEDNPAIEAKRRYTGGQARRIRKERARNMAKKSTRRANKRPIRKPENDVPDDEGS 191
            MFRSSGV+RR CARQ RLLHEDSSRGDFLGFSISRAPASDARYGMDMTRAPGYE+AAD+EPP+S NQKLADFA+RHGRLS SQVQKAKGYLWVGTVLYPAEQ SDVDVTFTWEIV E +DFE +D VNS+IEV++N EDNP IEAKRRYTGGQARRIRKER RN AKKS R     P RKP+ND+P+DE S
Sbjct:    1 MFRSSGVLRRVCARQTRLLHEDSSRGDFLGFSISRAPASDARYGMDMTRAPGYEIAADDEPPQSSNQKLADFATRHGRLSTSQVQKAKGYLWVGTVLYPAEQGSDVDVTFTWEIVNEPEDFESNDHVNSIIEVVENLEDNPLIEAKRRYTGGQARRIRKERTRNAAKKSVRXXXXXPTRKPDNDIPEDEDS 191
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BLAST of Gvermi6025.t1 vs. uniprot
Match: R7QL56_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL56_CHOCR)

HSP 1 Score: 169 bits (428), Expect = 3.450e-50
Identity = 101/195 (51.79%), Postives = 128/195 (65.64%), Query Frame = 0 
Query:    1 MFRSSGVIRRACARQARL---LHEDSSRGDFLGFSISRAPASDARYGMDMTRAPGYEVAADEEPPRSGNQKLADFASRHGRLSASQVQKAKGYLWVGTVLYPAEQSS-DVDVTFTWE--IVQEADDFEHSDQVNSVIEVIDNTEDNPAIEAKRRYTGGQARRIRKERARNMAKKSTRRANKR--PIRKPENDVPD 187
            M RS   + RA    + L   LHEDS RGDFLGF  +    +D R+GMDMTRAPGYE+AADE+PP  GNQKLADFA+RH RLS++Q+ +A GY+WVG+VLYP   +  D DV F+WE  + +     E  D+ + V+             A RRYTGGQARRIRK+R RN  K+++RR  +R  P RKPEND+PD
Sbjct:    1 MLRSMRALHRAGGVHSPLRRHLHEDS-RGDFLGFVSANVARADPRFGMDMTRAPGYELAADEDPPLVGNQKLADFAARHARLSSAQMLQADGYMWVGSVLYPNSIAHHDFDVEFSWERDVPERKVTLEVQDEKDEVL-------------ASRRYTGGQARRIRKDRERNAVKRASRRLRRRASPTRKPENDIPD 181
The following BLAST results are available for this feature:
BLAST of Gvermi6025.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEP5_9FLOR2.950e-10782.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QL56_CHOCR3.450e-5051.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1814639..1815214 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6025.t1Gvermi6025.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1814639..1815214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6025.t1 ID=Gvermi6025.t1|Name=Gvermi6025.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=192bp
MFRSSGVIRRACARQARLLHEDSSRGDFLGFSISRAPASDARYGMDMTRA
PGYEVAADEEPPRSGNQKLADFASRHGRLSASQVQKAKGYLWVGTVLYPA
EQSSDVDVTFTWEIVQEADDFEHSDQVNSVIEVIDNTEDNPAIEAKRRYT
GGQARRIRKERARNMAKKSTRRANKRPIRKPENDVPDDEGS*
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