Gvermi5951.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5951.t1
Unique NameGvermi5951.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length152
Homology
BLAST of Gvermi5951.t1 vs. uniprot
Match: A0A2V3IMB4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMB4_9FLOR)

HSP 1 Score: 187 bits (474), Expect = 2.820e-58
Identity = 86/151 (56.95%), Postives = 115/151 (76.16%), Query Frame = 0
Query:    1 MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLAPLMSIIFGDDVPKAFASFNLAIKAKVEENISKGQSS 151
            M+ VE+K+ INAT E+ Y VLM F SYP+WNPMV+ I+GD SPSST+   IK+G R+PQ+  P VLKNE N+EFRW+GKL L  ++RGEHYFIIE  ++GGCTF+HGE FSG L+  ++ + G+D+PKAF +FN A+K +VE+  +   SS
Sbjct:    1 MSDVEKKIVINATPEQTYNVLMDFPSYPEWNPMVLSIDGDTSPSSTLTVSIKVGARAPQSFKPTVLKNEVNREFRWVGKLLLACLYRGEHYFIIEGNSEGGCTFVHGERFSGVLSSPLNNMMGEDLPKAFEAFNNALKERVEKQDASAVSS 151          
BLAST of Gvermi5951.t1 vs. uniprot
Match: A0A3C2ANK3_9FLAO (SRPBCC domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A3C2ANK3_9FLAO)

HSP 1 Score: 125 bits (315), Expect = 3.360e-34
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    1 MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLAPLMSIIFGDDVPKAFASFNLAIKAKVE 142
            M ++E ++ INA+ ++V+ VL  F+SYP+WNP V+KI+G       +   IK+   + QT  P+VL  + NKEFRW GKLF+  +F GEHYF ++  ++    FIHGEIFSG L  L+  + G+     F + N A+K +VE
Sbjct:    1 MKNLETRIRINASVDDVWNVLTDFKSYPEWNPFVIKIDGKGEVGQHLTNDIKMEGSAVQTFRPLVLVRDENKEFRWKGKLFVTGLFDGEHYFQLKSISENETEFIHGEIFSGVLVALVMGLIGEKTKAGFEAMNTALKNRVE 142          
BLAST of Gvermi5951.t1 vs. uniprot
Match: A0A2N0L3L1_9CHLR (Polyketide cyclase n=1 Tax=SAR202 cluster bacterium Io17-Chloro-G2 TaxID=1926611 RepID=A0A2N0L3L1_9CHLR)

HSP 1 Score: 124 bits (311), Expect = 1.350e-33
Identity = 60/145 (41.38%), Postives = 89/145 (61.38%), Query Frame = 0
Query:    1 MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLAPLMSII--FGDDVPKAFASFNLAIKAKVEE 143
            M  +  ++ I A  E+++ VL  F SYP WNP +   +G+P   + +  ++K  +    T  P VL  EP++E RW+G LF+P +F GEHYF+IE +A+GG  F+ GEIF+G L PLM +I  F   + + F   NLA+KA+ EE
Sbjct:    1 MKEIRTEIDIAAPPEKIWGVLTDFASYPQWNPFMRTAQGEPITGNRLQVYLKPPDGMGMTFKPTVLNAEPSRELRWLGHLFVPGLFDGEHYFLIEDQAEGGARFVQGEIFTGVLVPLMGLIGLFPKTI-RGFEEMNLALKARAEE 144          
BLAST of Gvermi5951.t1 vs. uniprot
Match: A0A6N6KD70_9BACT (SRPBCC domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6N6KD70_9BACT)

HSP 1 Score: 118 bits (295), Expect = 3.570e-31
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 0
Query:    1 MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLA-PLMSIIFGDDVPKAFASFNLAIKAKVE 142
            M + E  V INA+ E V++VL  F++Y  WNP + KI G P   + I   + +    PQ  TP +LK E N+EFRW+G +F+  +F GEHYF++E    G    IHGE FSG L  PL+ +I G+     F   N A+K +VE
Sbjct:    1 MKNFETSVIINASQERVWEVLTDFENYAAWNPFISKINGKPEEGTKIKNTMNLEGMKPQVFTPTILKLEKNREFRWLGHMFIKGLFDGEHYFVLEESDHGSTKVIHGENFSGILVRPLLKMI-GEKTVSGFQIMNEALKKRVE 142          
BLAST of Gvermi5951.t1 vs. uniprot
Match: UPI001ABCF8AC (SRPBCC domain-containing protein n=1 Tax=Roseivirga sp. E12 TaxID=2819237 RepID=UPI001ABCF8AC)

HSP 1 Score: 117 bits (294), Expect = 6.170e-31
Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 0
Query:    1 MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLA-PLMSIIFGDDVPKAFASFNLAIKAKVEE 143
            M  +E ++ I A  E V+  LM F++YPDWNP +  I G+    + +   I +         P VLK E   EFRWIGKLF+  +F GEHYFI+E +A+GG  F HGE FSGF+  PL+ +I  +D+   F + N A+K + E+
Sbjct:    1 MKKIETEITIEADRELVWSTLMNFKAYPDWNPFIKSIRGEAQKGAELEVTIGMKKGKQMDFRPEVLKAENQTEFRWIGKLFIKGLFDGEHYFILEEQANGGTLFKHGENFSGFMVGPLLGMI-KEDIQNGFNAMNEALKRQCEK 143          
BLAST of Gvermi5951.t1 vs. uniprot
Match: UPI00036B6BCF (SRPBCC domain-containing protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00036B6BCF)

HSP 1 Score: 115 bits (289), Expect = 2.640e-30
Identity = 54/142 (38.03%), Postives = 86/142 (60.56%), Query Frame = 0
Query:    1 MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLAPLMSIIFGDDVPKAFASFNLAIKAKVE 142
            M ++   + I+A    V+ +LM  ++YP WNP + K++G+ +  +TI A I+   +     TPVV  N+P +EFRW+G LF P +F GEHYF++E   +G   FIHGE FSG L+ ++  +  ++    F + N A+KA+ E
Sbjct:    1 MKTITTSIVIDAPIATVWAILMDQEAYPQWNPFIQKLQGELAIGNTIRATIQAPGQKAMNFTPVVKVNQPEREFRWLGHLFFPGLFDGEHYFLLEDLGEGQTKFIHGEQFSGILSGIILKMIRENTKVGFLAMNEALKARAE 142          
BLAST of Gvermi5951.t1 vs. uniprot
Match: A0A4R7D471_9SPHI (Uncharacterized protein n=2 Tax=Sphingobacterium paludis TaxID=1476465 RepID=A0A4R7D471_9SPHI)

HSP 1 Score: 116 bits (290), Expect = 3.110e-30
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 0
Query:    4 VEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLAPLMSIIFGDDVPKAFASFNLAIKAKVEE 143
            +E++V INA+++EV+ V   FQ+Y +W+P V  +   P    +I   ++  N    T+ P VL+   NKE RW G+LFLP IF GEHYF+++P A+G   FI GE FSG L P +  +      + F +FN A+K +VEE
Sbjct:   16 IEQQVTINASSDEVWAVFANFQAYHEWSPTVRFLASAPEVGKSITVLLQQPNGKRMTMHPKVLRLSANKELRWRGRLFLPGIFDGEHYFMLKPLANGTTEFIQGEYFSGILVPFLRKMILGPTQEGFRAFNYALKKRVEE 155          
BLAST of Gvermi5951.t1 vs. uniprot
Match: A0A1F2ZZH5_9PROT (Polyketide cyclase n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F2ZZH5_9PROT)

HSP 1 Score: 115 bits (287), Expect = 5.300e-30
Identity = 54/135 (40.00%), Postives = 83/135 (61.48%), Query Frame = 0
Query:    8 VHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLAPLMSIIFGDDVPKAFASFNLAIKAKVE 142
            V I+A A  +++VL+ F +YP+WNP + +IEG+P   + +   ++ G+R P T  P +L  EP +E RW+G++ LP +F GEH F+IEP+  GGC   H E F G L PL   +  +   + F + N A+K +VE
Sbjct:    8 VDIDAAAAAIWRVLVDFAAYPEWNPFIRRIEGEPRVGTRLQVTVQPGDRRPMTFKPTILVAEPERELRWLGRVLLPGVFDGEHTFVIEPK-QGGCRLRHEESFRGLLVPLFGGMLVE-TERGFTAMNEALKRRVE 140          
BLAST of Gvermi5951.t1 vs. uniprot
Match: A0A534RE52_9DELT (SRPBCC domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534RE52_9DELT)

HSP 1 Score: 114 bits (286), Expect = 7.720e-30
Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 0
Query:    1 MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLAPLMSIIFGDDVPKAFASFNLAIKAKVE 142
            M  ++ ++ I+A+AE V+ +L+ F S+P WNP V  IEG P    ++   I+    S     P VL  EP +EFRW GKL LP +F GEHYF +E +  GG TF  GE+FSG L PL+         + F + N A+K + E
Sbjct:    1 MHRLDTQIAIDASAERVWSLLVDFPSHPRWNPFVRSIEGRPEVGQSLKVFIQPPGSSGMHFRPTVLAVEPYREFRWKGKLLLPGLFDGEHYFTLEAKPGGGLTFHQGELFSGILVPLLRRSLDGATKQGFVAMNAALKREAE 142          
BLAST of Gvermi5951.t1 vs. uniprot
Match: UPI000BAADE07 (SRPBCC domain-containing protein n=1 Tax=Actibacterium pelagium TaxID=2029103 RepID=UPI000BAADE07)

HSP 1 Score: 114 bits (286), Expect = 1.560e-29
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    7 KVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAHIKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADGGCTFIHGEIFSGFLA-PLMSIIFGDDVPKAFASFNLAIKAKVE 142
            +V I+A    V+Q LM  Q Y DWNP +  + G+ +  + I+A I++   +P T +P +L ++P KE RW+GKL +  IF GEHYF +EP ADG     HGE F G LA PLM++I G      F + N A+K +VE
Sbjct:   31 EVVIDAPPSAVWQTLMQTQDYADWNPFICDLSGELAVGNKISATIRLPESNPMTFSPTILASDPQKELRWVGKLGVNGIFDGEHYFTLEPRADGTTLLKHGETFRGLLAYPLMALI-GAKTKAGFDAMNSALKQRVE 166          
The following BLAST results are available for this feature:
BLAST of Gvermi5951.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMB4_9FLOR2.820e-5856.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A3C2ANK3_9FLAO3.360e-3442.25SRPBCC domain-containing protein n=1 Tax=Flavobact... [more]
A0A2N0L3L1_9CHLR1.350e-3341.38Polyketide cyclase n=1 Tax=SAR202 cluster bacteriu... [more]
A0A6N6KD70_9BACT3.570e-3141.96SRPBCC domain-containing protein n=1 Tax=Bacteroid... [more]
UPI001ABCF8AC6.170e-3141.67SRPBCC domain-containing protein n=1 Tax=Roseivirg... [more]
UPI00036B6BCF2.640e-3038.03SRPBCC domain-containing protein n=1 Tax=Lewinella... [more]
A0A4R7D471_9SPHI3.110e-3041.43Uncharacterized protein n=2 Tax=Sphingobacterium p... [more]
A0A1F2ZZH5_9PROT5.300e-3040.00Polyketide cyclase n=1 Tax=Alphaproteobacteria bac... [more]
A0A534RE52_9DELT7.720e-3040.85SRPBCC domain-containing protein n=2 Tax=Deltaprot... [more]
UPI000BAADE071.560e-2943.07SRPBCC domain-containing protein n=1 Tax=Actibacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 1..124
e-value: 1.1E-12
score: 48.5
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..143
e-value: 8.5E-23
score: 82.8
NoneNo IPR availablePANTHERPTHR36166CHROMOSOME 9, WHOLE GENOME SHOTGUN SEQUENCEcoord: 2..146
NoneNo IPR availableCDDcd07822SRPBCC_4coord: 3..142
e-value: 3.90534E-47
score: 147.859
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1418831..1419286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5951.t1Gvermi5951.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1418831..1419286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5951.t1 ID=Gvermi5951.t1|Name=Gvermi5951.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=152bp
MASVEEKVHINATAEEVYQVLMGFQSYPDWNPMVVKIEGDPSPSSTIAAH
IKIGNRSPQTITPVVLKNEPNKEFRWIGKLFLPFIFRGEHYFIIEPEADG
GCTFIHGEIFSGFLAPLMSIIFGDDVPKAFASFNLAIKAKVEENISKGQS
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019587Polyketide_cyclase/dehydratase
IPR023393START-like_dom_sf