Gvermi5933.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5933.t1
Unique NameGvermi5933.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length445
Homology
BLAST of Gvermi5933.t1 vs. uniprot
Match: A0A2V3IEV9_9FLOR (APH domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV9_9FLOR)

HSP 1 Score: 795 bits (2053), Expect = 1.500e-288
Identity = 397/474 (83.76%), Postives = 419/474 (88.40%), Query Frame = 0
Query:    1 MEHIEVQSEEFSVPEYEQHNYVAVLRSSGEFLVLEKSSAN------------------------------GELHIVEHQRFYSGGNDSYIIASLVVVEDISDSMILSGNLQSIEWKKCPHVLEQVCEHSAVSDFLQSFLHDPSPLLRGKKHLPWYGIGFYPKMLPMIQSILQEKGIEITGSPEQFQFSYRAAIYRIPTSRGPVFVKFVSCTNKEIAKMGGILHIVPHTTDFIFHLCLELNSFFSFDFGLSMNELCFVPRCKKAVAGYEDHQAIASEILTQWASIQQNFVSRIAELTAAKVPIYDDMWIRYGLEKLETYVGQDGASSVFQSRLRSCHNHVDRTLALWEKVHIPATIVHGDLNETNIAQPYGRGSSYLFFDWETAFVGHPFLDLLDVEYHPLYRSENAYLESWSRYTKLDFDKVVEVAKWTKPMQFLVAAIAEMLDGVVPIESRKRLVHISVEQFIECVEAFEEHV 444
            MEHIEVQ EE  VPEYEQHNYVAVLRSSG+ LVLEKSS +                              GELHIVEHQRFYSGGNDSYIIASLV+VEDISDSMI+SGNLQSIEWK+CP VLEQVC+HSAVSDFLQSFLHDPSP LRGK+HLPWY IGFYPKMLP +QSILQEKGIEIT SPEQFQFSYRAAIYRIPTSRG VFVKFVS TNKEIAKM GIL+IVPHTTDF+FH  LELNSFFSFDFGLSMN+LCFV RCKKAVAGYED  AIASE+LTQWASIQQN VSRIAELTAAK+PIYD+ WIRYGLE+LETYVGQDG SSVFQSRLRSCH+HVDRTLALWEK+HI  TIVHGDLNETNIAQP+GRGSSYLFFDWETAFVGHPFLDLLDVEYHPLYRSENAYLESWSRYTKLDFD+V+EVAKWTKPMQFLVAAIAEMLDG+VPIESRKRLVHISVEQF+ECVE FEE V
Sbjct:    1 MEHIEVQREELYVPEYEQHNYVAVLRSSGKSLVLEKSSPSEFNLPEVHSDCTPITAVQFLVELRDSLEIDGELHIVEHQRFYSGGNDSYIIASLVIVEDISDSMIMSGNLQSIEWKQCPQVLEQVCKHSAVSDFLQSFLHDPSPYLRGKQHLPWYEIGFYPKMLPKMQSILQEKGIEITDSPEQFQFSYRAAIYRIPTSRGRVFVKFVSWTNKEIAKMSGILNIVPHTTDFVFHSSLELNSFFSFDFGLSMNDLCFVLRCKKAVAGYEDQHAIASEVLTQWASIQQNCVSRIAELTAAKIPIYDETWIRYGLEQLETYVGQDGVSSVFQSRLRSCHDHVDRTLALWEKIHIFLTIVHGDLNETNIAQPHGRGSSYLFFDWETAFVGHPFLDLLDVEYHPLYRSENAYLESWSRYTKLDFDEVLEVAKWTKPMQFLVAAIAEMLDGIVPIESRKRLVHISVEQFVECVETFEEQV 474          
BLAST of Gvermi5933.t1 vs. uniprot
Match: A0A2V3IH90_9FLOR (APH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH90_9FLOR)

HSP 1 Score: 269 bits (687), Expect = 7.880e-82
Identity = 156/451 (34.59%), Postives = 242/451 (53.66%), Query Frame = 0
Query:   17 EQHNYVAVLRSSGEFLVLEKS-----------------------SANGE-------LHIVEHQRFYSGGNDSYIIASLVVVEDISDSMILSGNLQSIEWKKCPHVLEQVCEHSAVSDFLQSFLHDPSPLLRGKKHLPWYGIGFYPKMLPMIQSILQEKGIEITGSPEQFQFSYRAAIYRIPTSRGPVFVKFVSCTNKEIAKMGGILHIVPHTTDFIFHLCLELNSFFSFDFGLSMNELCFVPRCKKAVAGYEDHQAIASEILTQWASIQQNFVSRIAELTAAKVPIYDDMWIRYGLEKLETYVGQDGASSV--FQSRLRSCHNHVDRTLALWEKVHIPATIVHGDLNETNIAQPYGRGSSYLFFDWETAFVGHPFLDLLDVEYHPLYRSENAYLESWSRYTKLDFDKVVEVAKWTKPMQFLVAAIAEMLDGVVPIESRKRLVHISVEQFIE 435
            E H+YVA+L S+G  L+++++                       SA  E       LHIVE  +      D     SLV+VE   D        + +EWK         C+      FL+ FL     +   +  LPW  +GFY K+   +   L+      TG P+Q +FSY + +YRIPT+ G VFVK+VS  + EI K   I   +P  +     +  +LN+ F+ DFG+ + + CF     +  AGYE+  +++  +L +WA  QQ   S +A+L A  VP+ D+ WI  GL ++ET+  ++  SSV     +L+   ++++    +W+ + +P T+VHGDLNE+N+AQP G G+S+LFFDWE +++GHPFLDLLD +++P++R    +LESW++Y  +   K  E+A WTKP+  LV AI E+ +  +P   RK  V   ++ FIE
Sbjct:   12 EDHHYVAILTSNGTRLLVDRTGECSFGLPSFVSHCDAVISIKYLSALSEHFGINKCLHIVEDVQCLEEQTDPRHDGSLVIVEVEDDGYCTLERFEHVEWKHLFRTDSLRCDCPYALGFLRGFLTQSGGVDMDRSLLPWCILGFYRKVYSSVDESLEGTSYVRTGCPQQVRFSYHSTVYRIPTATGYVFVKYVSEKSTEIPKTSVITGCLPEVSQSPMCINTKLNALFTVDFGMPLTDTCFAMN--RPAAGYENVLSVSGLVLERWARTQQQSSSFLADLVAGGVPVRDEEWIWRGLLRVETFANRN-LSSVPGISCQLQFGRSYLECVFRVWKDIPLPNTLVHGDLNESNMAQPEGPGTSFLFFDWELSYIGHPFLDLLDEKWNPVFRGVGKFLESWAKYAGISLKKAEELAIWTKPVGHLVTAIIELENPSLPEVFRKSSVSSGIQSFIE 459          
BLAST of Gvermi5933.t1 vs. uniprot
Match: UPI00168893BD (phosphotransferase n=2 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI00168893BD)

HSP 1 Score: 67.4 bits (163), Expect = 1.820e-8
Identity = 75/311 (24.12%), Postives = 125/311 (40.19%), Query Frame = 0
Query:   95 VCEHSAVSDFLQSFLHDPSPLLRGKKHLPWYGIGFYPKMLPMIQSILQEKGIEITGSPEQFQFSYRAAIYRIPTSRGPVFVKFV-SCTNKEIAKMGGILHIVPHTTDFIFHLCLELNSFFSFDFGLS-MNELCFVPRCKKAVAGYEDHQAIASEILTQWASIQQNFVSRIAELTAAKVPIYDDMWIRYGLEKL--ETYVGQDGASSVFQSR----LRSCHNHVDRTLALWEKVHIPATIVHGDLNETNIAQPYGRGSSYLFFDWETAFVGHPFLDLLDVEYHPLYRSE---------NAYLESWSRYTKLD 388
            V EH AV +       DP+      + +PW  +G++ K    I++ L   GI      EQF+    + I R+ T+ G ++ K + +    +      +    P     I  +  E +     DFG + ++E   + R + A+  Y              A IQ N  SR+ +L A   P      + + +E L  +T     G   + +S     LR           +    +IP TIVHGD    N+       ++Y++FDW T  + HPF D+++  Y   Y  +         N YLE W+ Y  ++
Sbjct:   89 VPEHLAVLEAWFDEFKDPTI---SSQRVPWARLGWFEKASAWIEAQLNHLGISAISPIEQFRSWGISCIMRVNTTAGNIYFKALPNVLANDALFTQSLAASYPDNLPKILAVEPEQHWILMRDFGGTILSENSDIARWEAALRLY--------------AKIQINEASRVDKLLALGWPDRRIYKLPFHIEALLSDTEALLAGDFIIIESDDIEYLRGLIPQFKAMCEVLASYNIPQTIVHGDFWAKNVVV---TDNNYIYFDWPTGAIAHPFFDIVNFLYIEKYVPDIPNVRTHLRNIYLEQWTIYEPME 379          
BLAST of Gvermi5933.t1 vs. uniprot
Match: R7Q9W5_CHOCR (APH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W5_CHOCR)

HSP 1 Score: 67.0 bits (162), Expect = 3.890e-8
Identity = 71/317 (22.40%), Postives = 126/317 (39.75%), Query Frame = 0
Query:   85 WKKCPHVLEQVCEHSAVSDFLQSFLHDPSPLLRGKKHLPWYGIGFYPKMLPMIQSILQEKGIEITGSPEQFQFSYRAAIYRI-------PTSRGPVF--VKFVSCTNKEIAKMGGILHIVPHTTDFIFHLCLELNSFFSFDFGLSMNELCFVPRCKKAVAGYEDHQAIASEILTQW-ASIQQNFVSRIAELTAAKVPIYDDMWIRYGLEK-LETYVGQDGASSVFQSRLRSCHNHVDRTLALWEKVHIPATIVHGDLNETNIAQPYGRGSSYLFFDWETAFVGHPFLDLLDVEYHP------LYRSENAYLESWSRY 384
            WK   H LE     SA+ D       D S     K  +PW   G++ +    I ++LQE  +++       + ++ + + R        PTS  P    + +V   +  + K   I  I    T+ I    + +N        + M       RC           +I +E+L +  A + +  V  +  L  A VP+Y   W+   +++ L   +  +   +V  ++LR+    ++  L       IP T++HGDL+  NI         ++F DW +A++GHPF D +   +           +E  Y + W  Y
Sbjct:  471 WKVIGHELEPRSLLSAIVD-------DISNSRLPKNRVPWRSSGWFKETANWITAVLQENNMKLEQPIAIMRNTFASCVLRCHVRPFVEPTSGAPRKDDILYVKALHSRLLKASMIAVIHEVVTE-IAPAMVAVNE----ARNMCMERSVASSRCP----------SINTELLMKTIAGVHKRSVPHLEVLKHAGVPVYTAKWLLSNVKEILGCSLVIESGDNVSVAKLRANVPRLESCLKELSSYGIPHTLLHGDLHSLNIGDAVDNSFHHIF-DWNSAYIGHPFSDFVVTRFSEDDPEDEQELAEKVYFQYWREY 764          
The following BLAST results are available for this feature:
BLAST of Gvermi5933.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IEV9_9FLOR1.500e-28883.76APH domain-containing protein n=2 Tax=Gracilariops... [more]
A0A2V3IH90_9FLOR7.880e-8234.59APH domain-containing protein n=1 Tax=Gracilariops... [more]
UPI00168893BD1.820e-824.12phosphotransferase n=2 Tax=unclassified Planktothr... [more]
R7Q9W5_CHOCR3.890e-822.40APH domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1200.10coord: 234..422
e-value: 6.7E-8
score: 34.5
IPR002575Aminoglycoside phosphotransferasePFAMPF01636APHcoord: 242..364
e-value: 9.2E-7
score: 28.9
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 137..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1251586..1253010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5933.t1Gvermi5933.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1251586..1253010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5933.t1 ID=Gvermi5933.t1|Name=Gvermi5933.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=445bp
MEHIEVQSEEFSVPEYEQHNYVAVLRSSGEFLVLEKSSANGELHIVEHQR
FYSGGNDSYIIASLVVVEDISDSMILSGNLQSIEWKKCPHVLEQVCEHSA
VSDFLQSFLHDPSPLLRGKKHLPWYGIGFYPKMLPMIQSILQEKGIEITG
SPEQFQFSYRAAIYRIPTSRGPVFVKFVSCTNKEIAKMGGILHIVPHTTD
FIFHLCLELNSFFSFDFGLSMNELCFVPRCKKAVAGYEDHQAIASEILTQ
WASIQQNFVSRIAELTAAKVPIYDDMWIRYGLEKLETYVGQDGASSVFQS
RLRSCHNHVDRTLALWEKVHIPATIVHGDLNETNIAQPYGRGSSYLFFDW
ETAFVGHPFLDLLDVEYHPLYRSENAYLESWSRYTKLDFDKVVEVAKWTK
PMQFLVAAIAEMLDGVVPIESRKRLVHISVEQFIECVEAFEEHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002575Aminoglycoside_PTrfase
IPR011009Kinase-like_dom_sf