Gvermi5915.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5915.t1
Unique Name	Gvermi5915.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	628

Homology

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BLAST of Gvermi5915.t1 vs. uniprot
Match: A0A2V3IYI0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYI0_9FLOR)

HSP 1 Score: 409 bits (1052), Expect = 5.750e-132
Identity = 273/628 (43.47%), Postives = 366/628 (58.28%), Query Frame = 0

Query:   66 MPPKYENNDVHGSQQARERSLQDLEGDYKTPRTNFFFARNQQKISKPPSQESSPLELSPVQELFVEEFDVPSSKNVFSSTANSTGIRKQSTFVHKKANGAEHRTRD--VPSSIVDRYCSSPEEEVQSISEPDSDTFRFLKDDEVSSSSEKSFTLPSGIRNLFADAGADSPA-RNSAKSRKSHGLAIESEMFSPRLSTDGFDESVRSQNQRE-----LSEPKALKVSAASSKPR----------------------------------------------------------VLRRPLGSRKKTLINLS-KPPVSEEASTKSKSVSNEEPVITKVEEAVEVTKGSPGDSSTTETSGEIEVISPLLTKGVIMRAQTHKTNVNGIRKAETGKIMSREELMGDRRIVFLRESPIPKSLNPAAFSEEDDVMTRRPSSLFQHSSSESGGEEAGVPGASSNNRNPENDDGSFLT----DKASLGYIFQEVQSSNSSKFSENANSSGLVNRLGSSFKKAKDAVARRSVTDIPELSNTDMVIPGTIDEAVCKICYVCRKKLGCRVFVKNTGKKIKVESVDDERR-YYLRASLLVRLLGGEEPACAVNIRQSRADGMKTSFATLWDFYQRLENGLQEL 621
            MPPK E+ +   S  +    L + +GDYKTP T+ F  + +   S    +ES PLE+SPVQ+L  ++ D+PS+ +     +    + K +  V+++      RT D     SI +     P EE  ++ EP S+ F    +D+ S    KS  +  G++ LF          R S KSR       E EMFSPRLS D  D   R+          + EPKA K +  ++                                                             ++RRPLGSR+KTLI+LS K  V E+++   +  S       +V+E  +V++ SP   S+     +I+V+SP   KGVIMRA THKTNVNGIRKAETGKIMSR+EL+ +++ + L+E+PIPKSLNPAAFSEEDDVM+RRPS+LF  SSSES G  +G  G   +    + DDGSFL     DKAS  Y + EV S +SSKFSEN +SSG+VNRLGSSFKKAK+AVAR+SVT++P++  TD+++ GT+DEAV +ICYVCRKKL C+VFVKNTG+KIKVE  +D +   YLRA+L+++ +GG+  ACAVNIRQSR DGMKT+FA LW+FYQ LE GLQEL
Sbjct:    1 MPPKREDMESSSSNLSSVVRLDESDGDYKTPSTSLFGGQGEDG-SDSEGRESGPLEISPVQQLLFDDIDIPSAIDSLKKRSKGEKVEKDAEVVYEREKRRPRRTNDRFESDSISNALGIIPIEEETAV-EPHSEDFVQFSEDDESEEEAKSVRVIPGLQGLFXXXXXXXXXXRTSRKSRTPKAPDSELEMFSPRLSNDELDRHERTSRGPLPRLPLIYEPKAKKTAKRTTTDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLIRRPLGSRRKTLIDLSVKESVIEDSNGDEEKKSRHR--APRVQEE-KVSEKSPESRSSATIESDIKVVSPP-RKGVIMRANTHKTNVNGIRKAETGKIMSRDELLTEQKSMLLKENPIPKSLNPAAFSEEDDVMSRRPSTLFNFSSSESDGVTSGQRGKLGS----QTDDGSFLEGGLLDKASASYTYHEVHSGSSSKFSENGSSSGIVNRLGSSFKKAKNAVARKSVTELPDVGGTDLLLAGTVDEAVLRICYVCRKKLKCKVFVKNTGRKIKVECDEDRKAGRYLRATLVLKAVGGDNSACAVNIRQSRHDGMKTTFARLWEFYQELEKGLQEL 618

The following BLAST results are available for this feature:

BLAST of Gvermi5915.t1 vs. uniprot

BLAST of Gvermi5915.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IYI0_9FLOR	5.750e-132	43.47	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 611..627
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 413..462
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_1708	contig	ScGOVlb_1708:793964..795847 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5915.t1	Gvermi5915.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_1708 793964..795847 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5915.t1 ID=Gvermi5915.t1|Name=Gvermi5915.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=628bp
MSENNDNQSKSSPSKRLPRAKDSVDGKKRLVGGPIEKQEPNYERMSKLTI
SNKAASSNTSPKPWPMPPKYENNDVHGSQQARERSLQDLEGDYKTPRTNF
FFARNQQKISKPPSQESSPLELSPVQELFVEEFDVPSSKNVFSSTANSTG
IRKQSTFVHKKANGAEHRTRDVPSSIVDRYCSSPEEEVQSISEPDSDTFR
FLKDDEVSSSSEKSFTLPSGIRNLFADAGADSPARNSAKSRKSHGLAIES
EMFSPRLSTDGFDESVRSQNQRELSEPKALKVSAASSKPRVLRRPLGSRK
KTLINLSKPPVSEEASTKSKSVSNEEPVITKVEEAVEVTKGSPGDSSTTE
TSGEIEVISPLLTKGVIMRAQTHKTNVNGIRKAETGKIMSREELMGDRRI
VFLRESPIPKSLNPAAFSEEDDVMTRRPSSLFQHSSSESGGEEAGVPGAS
SNNRNPENDDGSFLTDKASLGYIFQEVQSSNSSKFSENANSSGLVNRLGS
SFKKAKDAVARRSVTDIPELSNTDMVIPGTIDEAVCKICYVCRKKLGCRV
FVKNTGKKIKVESVDDERRYYLRASLLVRLLGGEEPACAVNIRQSRADGM
KTSFATLWDFYQRLENGLQELEAGNNR*