Gvermi5911.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5911.t1 vs. uniprot
Match: A0A346M336_AGACH (R-phycoerythrin gamma33 subunit n=1 Tax=Agarophyton chilensis TaxID=2510777 RepID=A0A346M336_AGACH) HSP 1 Score: 528 bits (1360), Expect = 9.140e-188 Identity = 269/319 (84.33%), Postives = 288/319 (90.28%), Query Frame = 0
Query: 1 MDAPAFAASGMFSPVKVGTSSFAPAVVSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPTGVYRVGVCEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASACHHEETQIFAYPAVAAAMCRD 319
M+APAFA +GMFS VKV TSSF VSPR A+PPAVTMAVDAFQKKFQ +GKINIDYSRPKKLA++KRAGYPVS DYP SPAMAGHYSISNCNVP A KI KYDE+CAKGMMQV+KRSAVPFGTY+TKC EGTVPQQAF KRV +RTKAFRQAQKP++VR+AER+ENRR F MANGCHREEQQFS MPMSAATY+A RAEAMGTCYRVVTPTSIAEDYMAAGVRAQ+TAKAHP+GVYRVGVCEDG+AKGDA+ LRVAALAAEFRAGQQSP TVT QQYESARTARKLYAS CHHEETQIFAYPAVAAAMCRD
Sbjct: 1 MEAPAFAVNGMFSAVKVRTSSFTANNVSPRT-GTASPPAVTMAVDAFQKKFQSFGKINIDYSRPKKLASFKRAGYPVSFDYPNSPAMAGHYSISNCNVPSACDKIFMKYDEYCAKGMMQVFKRSAVPFGTYTTKCTEGTVPQQAFAKRVFNRTKAFRQAQKPINVRLAERYENRRLAFTMANGCHREEQQFSTMPMSAATYLAGRAEAMGTCYRVVTPTSIAEDYMAAGVRAQITAKAHPSGVYRVGVCEDGYAKGDAENLRVAALAAEFRAGQQSPSTVTGQQYESARTARKLYASTCHHEETQIFAYPAVAAAMCRD 318
BLAST of Gvermi5911.t1 vs. uniprot
Match: A0A2V3IVR4_9FLOR (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVR4_9FLOR) HSP 1 Score: 467 bits (1201), Expect = 1.480e-163 Identity = 232/319 (72.73%), Postives = 268/319 (84.01%), Query Frame = 0
Query: 1 MDAPAFAASGMFSPVKVGTSSFAPAVVSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPTGVYRVGVCEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASACHHEETQIFAYPAVAAAMCRD 319
MD+ AFA +GMFS V VGTSSF V+ + R A+P AV MAVD FQK+FQ GKIN+DYSRPKKLA YKR+GY LDYPT P+MAGHYSISNCN+ + KIL KYDE+CAKGMMQVYKRSAVP+G Y+TKC EGT+PQQAFDKRV +RT+AFRQAQKP++VR+ E++ENRR FI NGCHREEQQF MPMS ATY+A R+EA+GTCYR+VTPT++AEDYMA VR+Q+T KAHPTGVYRVGVCEDG+AKGDA+ RVAALA+EFR QQS +T QQYESARTARKLYAS+CHHEETQI+ YPAVAAAMCRD
Sbjct: 1 MDSAAFAVNGMFSAVNVGTSSFTKNNVTSQ-RTTASPAAVRMAVDPFQKQFQSPGKINVDYSRPKKLATYKRSGYSAILDYPTQPSMAGHYSISNCNITSGAKKILMKYDEYCAKGMMQVYKRSAVPYGEYTTKCTEGTLPQQAFDKRVFNRTQAFRQAQKPINVRLGEQYENRRLAFIFTNGCHREEQQFKEMPMSTATYLAGRSEALGTCYRLVTPTTVAEDYMADSVRSQITQKAHPTGVYRVGVCEDGYAKGDAENRRVAALASEFRTSQQSASAITGQQYESARTARKLYASSCHHEETQIYQYPAVAAAMCRD 318
BLAST of Gvermi5911.t1 vs. uniprot
Match: R7Q9W8_CHOCR (R-phycoerythrin gamma subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W8_CHOCR) HSP 1 Score: 458 bits (1178), Expect = 4.510e-160 Identity = 233/318 (73.27%), Postives = 263/318 (82.70%), Query Frame = 0
Query: 1 MDAPAFAASGMFSPVKVGTSSFAPAVVSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPTGVYRVGVCEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASACHHEETQIFAYPAVAAAMCR 318
MD+PAFA +GMF+P KV S+F P R +A +V MAVD Q+KFQ GKIN+DYSRPKKLA YKR+GY V +DYPTS AMAGHYS+S+C PG +AKIL KYDE+CAKGMMQ YKRSAVPFGTY+TKCAEGTVPQQAFDKRV +RT AFRQAQKPV+VR+ E++E RR CFI+ANGC REE QF MPMSAAT++A RAEAMGTCYR VTP++IAEDYMA GVRAQLT KAHP G+YRVGVCEDG AKGDA+ RVAAL+AE+R+ QQSP VT QQYESARTARKLYA CHHEE QIF YPAVAAAMCR
Sbjct: 1 MDSPAFAVTGMFTPSKVAVSTFTPRTSPSTRRPTSA--SVRMAVDPLQRKFQTLGKINVDYSRPKKLATYKRSGYSVEMDYPTSAAMAGHYSVSSCGKPGGAAKILMKYDEYCAKGMMQTYKRSAVPFGTYTTKCAEGTVPQQAFDKRVFNRTNAFRQAQKPVNVRLREQYEARRACFILANGCDREEAQFKNMPMSAATFLAGRAEAMGTCYRNVTPSTIAEDYMADGVRAQLTQKAHPYGLYRVGVCEDGHAKGDAEERRVAALSAEYRSNQQSPAAVTGQQYESARTARKLYAHDCHHEEEQIFQYPAVAAAMCR 316
BLAST of Gvermi5911.t1 vs. uniprot
Match: PHEG_COROI (R-phycoerythrin gamma chain, chloroplastic n=2 Tax=Corallina officinalis TaxID=35170 RepID=PHEG_COROI) HSP 1 Score: 391 bits (1005), Expect = 9.790e-134 Identity = 202/321 (62.93%), Postives = 255/321 (79.44%), Query Frame = 0
Query: 1 MDAPAFAASGMFSPVKVGTSSFAPAV--VSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPV-SLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPTGVYRVGVCEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASACHHEETQIFAYPAVAAAMCR 318
MD+PAFA +GMF+ KVG +SF A VS R R + VTMAVDAFQKKFQ +GKI +DYSRPKKLA+YKR G+ S++YP +P+ AG YSI+ C P ++KIL KYDE+CAKG++QV+KR+AVPFG Y+TKC EGTV QA +KRV +RT AFRQAQKPV+VR+AE++E RR+CFI+ANGC REE QF +MP+SAAT++A + E++GTC+RVVTP++IAEDY+A+GVR QL AK++ TGVY VG C +GFAKGDA+ RVAALAAE+RA QQSP VT +QYES+R A KLYA C HE+ Q++ +PA AAA CR
Sbjct: 1 MDSPAFAVTGMFAAAKVGVTSFTGATEPVSTRRRTSGN---VTMAVDAFQKKFQTFGKIGVDYSRPKKLASYKRGGFDAASVEYPNAPSFAGKYSIAPCGQPSGASKILMKYDEYCAKGVLQVFKRNAVPFGVYTTKCTEGTVAGQAQEKRVFNRTMAFRQAQKPVNVRLAEQYEARRKCFILANGCSREEDQFKSMPVSAATFLAGKHESLGTCFRVVTPSNIAEDYIASGVRMQLVAKSNSTGVYGVGSCMEGFAKGDAEARRVAALAAEYRALQQSPAAVTGRQYESSRMAVKLYAQNCSHEQEQLYKWPATAAAFCR 318
BLAST of Gvermi5911.t1 vs. uniprot
Match: PHEG_AGLNE (R-phycoerythrin gamma chain, chloroplastic n=1 Tax=Aglaothamnion neglectum TaxID=2765 RepID=PHEG_AGLNE) HSP 1 Score: 375 bits (964), Expect = 1.540e-127 Identity = 190/318 (59.75%), Postives = 240/318 (75.47%), Query Frame = 0
Query: 1 MDAPAFAASGMFSPVKVGTSSFAPAVVSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPTGVYRVGVCEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASACHHEETQIFAYPAVAAAMCR 318
M +PAFA +GMF+PVK+ S A V ++ AA+ V M VD Q+K+Q GKI +DYSRPKKLA Y R+GY V +++P +P+MAGHYS+++C+ G +AKIL KYDE+CAKGM+QV KR+A G Y+TKC EGT PQ AFD RV +RT+AFRQAQKPV+ R+ E++E R+ CF++A+ C REE QF MPMS AT++A++ EA G CYR V PTS+AEDYMA VRAQL K +P GVY VG CEDG AKGDAD+ RV ALA+E+RA QSP TVT QQY+SA+ A +L+A CHHE+ QI+ YPAVAAAMCR
Sbjct: 1 MASPAFAVNGMFTPVKLSGSFTASMPVD--SKPAASATGVRMVVDPLQRKYQSIGKIGVDYSRPKKLATYVRSGYSVGMEFPNTPSMAGHYSLTDCDKAGGAAKILMKYDEYCAKGMLQVGKRAACRTGVYTTKCTEGTQPQMAFDVRVFNRTQAFRQAQKPVAARLREQYEARKACFVLAHNCSREEAQFKEMPMSCATFLASKMEATGACYRTVRPTSVAEDYMAGSVRAQLYTKLNPKGVYGVGACEDGHAKGDADQRRVIALASEYRAAAQSPSTVTGQQYKSAQLATQLFAHDCHHEQEQIYEYPAVAAAMCR 316
BLAST of Gvermi5911.t1 vs. uniprot
Match: A0A291FEE7_GRIPA (LR gamma4 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEE7_GRIPA) HSP 1 Score: 360 bits (924), Expect = 1.890e-121 Identity = 193/319 (60.50%), Postives = 231/319 (72.41%), Query Frame = 0
Query: 1 MDAPAFAASGMFSPVKVGTSSFAPAVVSPRARAAAAPPA-VTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPTGVYRVGVCEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASACHHEETQIFAYPAVAAAMCR 318
MD+PAFA +GMFS VKVG SSF V+ A + AP A V M VD FQ+KFQ GKI IDYSRPKKLA YKR GY V LD+P + +MAGHYS+++C G +AKIL KYDE+CAKGM+QVYKRSAV G Y+TKC E T P A+D RV +RT AFRQAQKPV+VR+ E++ R+ C +A+ C REE QF MPMS AT++A + EAMGTCYR V P+S AEDYMA VR Q+ K + +GVY VG CEDG AKGDAD RV ALA+E+RA QQ VT QY S++ A +LY +C+HEE Q YPAVAAAMCR
Sbjct: 1 MDSPAFAVNGMFSAVKVGNSSFTENKVT--AVSKTAPTASVRMVVDPFQRKFQSIGKIGIDYSRPKKLATYKRVGYSVGLDFPNAVSMAGHYSLTDCTRAGGAAKILMKYDEYCAKGMLQVYKRSAVSTGVYTTKCTEATQPGVAYDVRVFNRTAAFRQAQKPVNVRLGEQYAARKACVTLAHNCSREEAQFKNMPMSCATFLAGKMEAMGTCYRTVRPSSKAEDYMAGSVRMQVYQKGNASGVYPVGGCEDGHAKGDADLRRVIALASEYRAAQQGAAAVTGAQYASSKMAIQLYGHSCNHEEGQFCDYPAVAAAMCR 317
BLAST of Gvermi5911.t1 vs. uniprot
Match: A0A1X6NLA4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLA4_PORUM) HSP 1 Score: 268 bits (684), Expect = 4.350e-85 Identity = 162/321 (50.47%), Postives = 203/321 (63.24%), Query Frame = 0
Query: 5 AFAASGMFSPVKVGTSSFAP-AVVSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPT---GVYRVGV-CEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASA-CHHEETQIFAYPAVAAAMCRD 319
AFA +GMF KVG S+F A+ +P A A A +TM VD FQ++FQ G+I +DY+ PKKLA+YKR+GY +DYPTS AMAGHY++S C +AKI++K DEF AKG+ YKR+AVP G Y+TKCAE T A KRV +R AF+ AQK + + +F+NRR+ I A+GCH EE QF PMSAA Y+A R EAMGTC R TP+S AEDYM R L K P+ GVYR V C DG AKG A++ RVA LA E+RA QQS +A +++ A +Y C+ EE YPAVA AM D
Sbjct: 3 AFAVNGMFPVAKVGASAFTTNALTTPAAAPAKAASTITM-VDPFQRRFQSPGRIGVDYTVPKKLASYKRSGYSSVIDYPTSAAMAGHYTLSFCGKRSGAAKIMAKADEFMAKGINMQYKRTAVPNGEYTTKCAEATQHGGAEFKRVFNRITAFKAAQKSPAAKATAKFQNRRKAIIAAHGCHHEEVQFCNNPMSAAVYLAGRNEAMGTCIRYATPSSEAEDYMC---RVVLDIKRRPSSAGGVYRPSVFCTDGHAKGQAEQRRVATLAGEYRAAQQSASATSAASFKAPMEALTVYGHGDCNAEEEIYRNYPAVAMAMVTD 319
BLAST of Gvermi5911.t1 vs. uniprot
Match: A0A1X6NQF9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQF9_PORUM) HSP 1 Score: 267 bits (683), Expect = 6.350e-85 Identity = 159/320 (49.69%), Postives = 202/320 (63.12%), Query Frame = 0
Query: 3 APAFAASGMFSPVKVGTSSF-APAVVSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSLDYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPMSAATYMAARAEAMGTCYRVVTPTSIAEDYMAAGVRAQLTAKAHPTGVYRVG-VCEDGFAKGDADRLRVAALAAEFRAGQQSPRTVTAQQYESARTARKLYASA-CHHEETQIFAYPAVAAAMCRD 319
A AFA +GMF K S+F A A+ +P A A VTM VDAFQ++FQ GKI IDYSRP+KL++YKR+G +DYPTSPAMAG Y++S C ++K L+K DE+ AKG+ VYKR+A G Y+T+CAE T P A KRV +R AF+ AQK + + ++F+NRR+ I A+GCH EE QF PMSA+ Y+A R EA GTC R TP+S AE+YMA V Q + GV+RV C DG AKG A++ RVAALA EFRA QQ P +A Y++A A +Y C+ EE YPA A AM D
Sbjct: 2 ATAFAVTGMFPTTKATGSAFTANALKAPAVAPAKAASTVTM-VDAFQRRFQSPGKIGIDYSRPRKLSSYKRSGPSSLIDYPTSPAMAGFYTLSTCGRMSGASKTLAKADEYMAKGINMVYKRTAAASGVYTTQCAESTTPGGAEFKRVFNRISAFKAAQKSPAAKATQKFQNRRKAIIAAHGCHHEEVQFCNNPMSASVYLAGRNEASGTCIRYATPSSAAEEYMARSVADQKRRPSAAGGVFRVSPYCTDGHAKGQAEQRRVAALAGEFRAVQQGPSATSAAAYKAATEALTVYGHGDCNAEEVIYRNYPATAMAMVTD 320
BLAST of Gvermi5911.t1 vs. uniprot
Match: A0A6T6MQX6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MQX6_9RHOD) HSP 1 Score: 97.8 bits (242), Expect = 9.200e-21 Identity = 69/194 (35.57%), Postives = 104/194 (53.61%), Query Frame = 0
Query: 9 SGMFSPVKVGTSSFAPAVVSPRARAAAAPPAVTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSL-DYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVP-----FGTYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCFIMANGCHREEQQFSAMPM 196
SGMF K+G+ V A+ +++ VTM VDAFQ+ +Q YGK+ IDY K+ Y R G P L +YP +PA AG Y+++ CN + +L+K DE A+ M+ + +AV + T+ T C +G QA++ RV RT A+R+ K + + + + R+ F A G + FSAMPM
Sbjct: 8 SGMFVQPKLGSGFGGERVAG--AQQSSSSSTVTMRVDAFQRNYQSYGKVMIDYKVGKRPFEYTRKGSPAGLLEYPPNPAWAGVYALTLCNKKPGISSVLAKADEHIAR--MRQMQANAVNTPGGVYNTFGTYCHDGMSKGQAWETRVDQRTAAYRECLKSTATKKNQEYAARKSAFAAA-GPTTYTEFFSAMPM 196
BLAST of Gvermi5911.t1 vs. uniprot
Match: A0A7S3A214_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A214_9RHOD) HSP 1 Score: 97.4 bits (241), Expect = 1.690e-20 Identity = 54/143 (37.76%), Postives = 85/143 (59.44%), Query Frame = 0
Query: 40 VTMAVDAFQKKFQRYGKINIDYSRPKKLAAYKRAGYPVSL-DYPTSPAMAGHYSISNCNVPGASAKILSKYDEFCAKGMMQVYKRSAVPFG---TYSTKCAEGTVPQQAFDKRVVSRTKAFRQAQKPVSVRMAERFENRRRCF 178
VTM VDAFQ+++Q +GK+ +DY+ K+ Y R G P L DYP P AG +S++ CN + +++K DEF AK ++ + +G TY T C +G +A KR RT +F++AQKP++VR+ + + +R+ F
Sbjct: 37 VTMRVDAFQRQYQSFGKVMVDYTLGKRPYEYTRKGSPADLLDYPPGPEWAGVHSLTLCNKRPGISSVMAKADEFLAKAVLARDMVNNCKYGELNTYGTYCHDGQSKFEAEKKRGAMRTASFKEAQKPMNVRLNQIYSSRKAAF 179 The following BLAST results are available for this feature:
BLAST of Gvermi5911.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 11
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The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5911.t1 ID=Gvermi5911.t1|Name=Gvermi5911.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=320bpback to top |