Gvermi5905.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5905.t1
Unique NameGvermi5905.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length398
Homology
BLAST of Gvermi5905.t1 vs. uniprot
Match: A0A2V3IPL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPL8_9FLOR)

HSP 1 Score: 432 bits (1110), Expect = 3.440e-147
Identity = 223/400 (55.75%), Postives = 297/400 (74.25%), Query Frame = 0
Query:    1 MYKLLSLKRSSGDDDENQPPANTEDPGHPLFTLTSTDPEDRRQSLFRRMFSSNHSTSANTITAA--KKSSMVPPNYEALFEVINESVLKPARHDPSHALHVCSLTDNAIRSELSDMYYILGNMDLRPLMLTKTDTDLFFNWFAVFHSVIIEVFYLEEAVLFSWVERADELSDEQKKWESRPSPIRGELSEGRRKKKHGEILAISSEIIRYASRFEGRPVMQSLPTLAVQVRNLVTEFHAYFELKKLELPPLISTRISSRQAAGLERKFWTTVRRMEHPAYLVSAMVSSMDRRSIRRIKNKFFPAHTRRLLHKWAGIYQEKHKSIVFDFNERLIESYKEREKQLEENENVRARAAAQEQALAELAADNGVSENDSRAQSCASTFHD-SFSASHSRQLISAV 397
            MYK+LS ++ S +D ENQP   +E+PG PLF++ STDPEDR  ++FRRMFSSN S  +   + +  +  S+VPPNY+ LF V++  +LKP  ++P+H L V SL+DNAIR+E+ DMY+IL NMD+RPLMLT  D  LF +WFAVFHSVI EVFY+EEAVL+SW+E AD+++ E++KWE++P+PI G LSEGRRKK+HGEIL + ++I+R  S FEGRPVMQ LP LA  ++N V+E + Y ELK+ ELP  IS R  ++QA  LE+K W TVR +EHPAY+VSAM SSM RR +RRIKN++F A TRRL+++W   Y++ HK I+  FN+RL++S KERE Q++ENE  RA A   E        +  + ++DSRA SCASTFHD S SASHS  ++SAV
Sbjct:    1 MYKILSKRKGSAEDAENQPTPRSENPGLPLFSVKSTDPEDRMLNIFRRMFSSNASVQSGLQSPSFNRMCSLVPPNYKPLFPVVSPEMLKPETYEPTHHLFVLSLSDNAIRNEIRDMYHILKNMDMRPLMLTTEDISLFLDWFAVFHSVISEVFYMEEAVLYSWIEGADDMTKEERKWETKPNPITGHLSEGRRKKRHGEILGLGTKILRSRSYFEGRPVMQELPELAKNIQNFVSEIYRYMELKRTELPAFISKRFCAKQARILEKKLWETVRNLEHPAYVVSAMTSSMSRREVRRIKNRYFSATTRRLINRWQTTYEQNHKEILGVFNDRLLDSQKEREHQVQENEFARAHAQPLEPVDQNRIQNMVMCDSDSRAPSCASTFHDNSMSASHSVHMVSAV 400          
BLAST of Gvermi5905.t1 vs. uniprot
Match: A0A1X6NWH1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWH1_PORUM)

HSP 1 Score: 117 bits (292), Expect = 3.980e-25
Identity = 79/263 (30.04%), Postives = 133/263 (50.57%), Query Frame = 0
Query:   99 VCSLTDNAIRSELSDMYYILGNMDLRPLMLTKTDTDLFFNWFAVFHSVIIEVFYLEEAVLFSWVERADELSDEQKKWESRPSPIRGELSEGRRKKKHGEILAISSEIIRYASRFEGRPVMQSLPTLAVQVRNLVTEFHAYFELKKLELPPLISTRISSRQAAGLERKFWTTVRRMEHPAYLVSAMVSSMDRRSIRRIKNKFFPAHTRRLLHKWAGI-----YQEKHKSIVFDFNERLIESYK-EREKQLEENENVRARAAAQE 355
            VC + +N++R E+ D+Y IL + + R L L  TD +L F WF  F  + +++F +EE +LF+++ER D LS   + W      ++G L E +R    G I +  ++       F GRP  Q  P LA   + L +   ++  LK  ELPP + TR S ++    E+K+W   + MEH   ++S    SM      R K +  P+    +  + +G      ++  H + V + +E L+E+ K ER K +E +++     A +E
Sbjct:   72 VC-MVNNSVRLEVRDLYRILQSCEARKLQLGPTDMELLFAWFEEFEILCVDLFEMEEDLLFAFIERNDHLSRYDRVWSGEGDKLKGALCEAKRTLAKGTITSAFAKFNDVEDEFCGRPTAQVFPALAPAAQELASAILSFVALKDQELPPALQTRFSEKEIRAQEKKYWAETKVMEHSDVILSLATRSMTPDERVRWKARAAPSRAAIIGLRTSGAELYARFERCHLAFVTE-SEELVETAKAERAKLMEASKSANGAVADRE 332          
BLAST of Gvermi5905.t1 vs. uniprot
Match: A0A7S2Z8U5_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z8U5_9RHOD)

HSP 1 Score: 69.3 bits (168), Expect = 3.020e-9
Identity = 49/155 (31.61%), Postives = 83/155 (53.55%), Query Frame = 0
Query:   96 ALHVCSLTDNAIRSELSDMYYILGNMDLRPLMLTKTDTDLFFNWFAVFHSVIIEVFYLEEAVLFSWVERADELSDEQKKWESRPSPIRGELSEGRRKKKHGEILAISSEIIRYASRFEGRPVMQSLPTLAVQVRNLVTEFHAYFELKKLELPPLI 250
            +L + ++++N++R+EL+DMYYI+ +M  R L L+  D D F+ WF VF+  +  VF L+E  +FS +++   L       +S  SP      EGRR  ++     +  +I  Y  R + +P  + LP L   V  +V     Y+ + +  +PPLI
Sbjct:   77 SLDILAVSNNSVRAELNDMYYIVQSMSKRRLDLSHDDIDDFYVWFEVFNFFLQGVFELQEQAIFSIIDQRVTL-------QSTLSP------EGRRDFRNAITYELK-KIDEYQPRVQTKPPGEVLPQLISFVDAVVPRLLRYYRVMEKHVPPLI 217          
The following BLAST results are available for this feature:
BLAST of Gvermi5905.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IPL8_9FLOR3.440e-14755.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NWH1_PORUM3.980e-2530.04Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2Z8U5_9RHOD3.020e-931.61Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 324..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:723246..724439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5905.t1Gvermi5905.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 723246..724439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5905.t1 ID=Gvermi5905.t1|Name=Gvermi5905.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=398bp
MYKLLSLKRSSGDDDENQPPANTEDPGHPLFTLTSTDPEDRRQSLFRRMF
SSNHSTSANTITAAKKSSMVPPNYEALFEVINESVLKPARHDPSHALHVC
SLTDNAIRSELSDMYYILGNMDLRPLMLTKTDTDLFFNWFAVFHSVIIEV
FYLEEAVLFSWVERADELSDEQKKWESRPSPIRGELSEGRRKKKHGEILA
ISSEIIRYASRFEGRPVMQSLPTLAVQVRNLVTEFHAYFELKKLELPPLI
STRISSRQAAGLERKFWTTVRRMEHPAYLVSAMVSSMDRRSIRRIKNKFF
PAHTRRLLHKWAGIYQEKHKSIVFDFNERLIESYKEREKQLEENENVRAR
AAAQEQALAELAADNGVSENDSRAQSCASTFHDSFSASHSRQLISAV*
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